RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 PRIM1P49642 420 aaKnown RBP30.89■■■□□ 2.54
SPG21-205ENST00000558339 ZCRB1Q8TBF4 217 aaKnown RBP30.89■■■□□ 2.54
SPG21-205ENST00000558339 KAT6BQ8WYB5 2073 aa30.89■■■□□ 2.54
SPG21-205ENST00000558339 SLC27A3Q5K4L6 730 aa30.87■■■□□ 2.53
SPG21-205ENST00000558339 UTRNP46939 3433 aa30.87■■■□□ 2.53
SPG21-205ENST00000558339 DOT1LQ8TEK3 1739 aa30.87■■■□□ 2.53
SPG21-205ENST00000558339 USHBP1Q8N6Y0 703 aa30.86■■■□□ 2.53
SPG21-205ENST00000558339 SYTL4Q96C24 671 aaPredicted RBP30.86■■■□□ 2.53
SPG21-205ENST00000558339 KCNQ4P56696 695 aa30.85■■■□□ 2.53
SPG21-205ENST00000558339 ARXQ96QS3 562 aa30.83■■■□□ 2.53
SPG21-205ENST00000558339 PNPLA7Q6ZV29 1317 aa30.81■■■□□ 2.52
SPG21-205ENST00000558339 HSP90AB2PQ58FF8 381 aa30.81■■■□□ 2.52
SPG21-205ENST00000558339 CARD14Q9BXL6 1004 aa30.81■■■□□ 2.52
SPG21-205ENST00000558339 INSRP06213 1382 aa30.79■■■□□ 2.52
SPG21-205ENST00000558339 CDCA8Q53HL2 280 aa30.79■■■□□ 2.52
SPG21-205ENST00000558339 KIF20BQ96Q89 1820 aa30.79■■■□□ 2.52
SPG21-205ENST00000558339 MAP3K5Q99683 1374 aa30.79■■■□□ 2.52
SPG21-205ENST00000558339 LY75O60449 1722 aa30.78■■■□□ 2.52
SPG21-205ENST00000558339 QSER1Q2KHR3 1735 aa30.78■■■□□ 2.52
SPG21-205ENST00000558339 CGNL1Q0VF96 1302 aa30.78■■■□□ 2.52
SPG21-205ENST00000558339 SMG6Q86US8 1419 aaKnown RBP30.78■■■□□ 2.52
SPG21-205ENST00000558339 FLT4P35916 1363 aa30.77■■■□□ 2.52
SPG21-205ENST00000558339 SLC16A10Q8TF71 515 aa30.76■■■□□ 2.51
SPG21-205ENST00000558339 RAPGEF4Q8WZA2 1011 aa30.76■■■□□ 2.51
SPG21-205ENST00000558339 TUBGCP6Q96RT7 1819 aa30.75■■■□□ 2.51
SPG21-205ENST00000558339 KIF24Q5T7B8 1368 aa30.75■■■□□ 2.51
SPG21-205ENST00000558339 NSD3Q9BZ95 1437 aa30.74■■■□□ 2.51
SPG21-205ENST00000558339 TATP17735 454 aaPredicted RBP30.74■■■□□ 2.51
SPG21-205ENST00000558339 TFCP2L1Q9NZI6 479 aa30.74■■■□□ 2.51
SPG21-205ENST00000558339 CCNL1Q9UK58 526 aaPredicted RBP30.73■■■□□ 2.51
SPG21-205ENST00000558339 EMILIN1Q9Y6C2 1016 aa30.73■■■□□ 2.51
SPG21-205ENST00000558339 COL24A1Q17RW2 1714 aa30.73■■■□□ 2.51
SPG21-205ENST00000558339 PCDH11XQ9BZA7 1347 aa30.69■■■□□ 2.5
SPG21-205ENST00000558339 PCDH11YQ9BZA8 1340 aa30.69■■■□□ 2.5
SPG21-205ENST00000558339 CYP27B1O15528 508 aa30.68■■■□□ 2.5
SPG21-205ENST00000558339 TIMELESSQ9UNS1 1208 aa30.67■■■□□ 2.5
SPG21-205ENST00000558339 POLD1P28340 1107 aa30.66■■■□□ 2.5
SPG21-205ENST00000558339 NCAPD2Q15021 1401 aa30.65■■■□□ 2.5
SPG21-205ENST00000558339 ZNF784Q8NCA9 323 aaPredicted RBP30.65■■■□□ 2.5
SPG21-205ENST00000558339 COL23A1Q86Y22 540 aaPredicted RBP30.64■■■□□ 2.5
SPG21-205ENST00000558339 KLHL34Q8N239 644 aa30.62■■■□□ 2.49
SPG21-205ENST00000558339 ANKRD26Q9UPS8 1709 aa30.61■■■□□ 2.49
SPG21-205ENST00000558339 TOGARAM1Q9Y4F4 1720 aa30.61■■■□□ 2.49
SPG21-205ENST00000558339 PKD1L3Q7Z443 1732 aa30.61■■■□□ 2.49
SPG21-205ENST00000558339 PPM1GO15355 546 aaPredicted RBP30.6■■■□□ 2.49
SPG21-205ENST00000558339 GOLGB1Q14789 3259 aaKnown RBP30.6■■■□□ 2.49
SPG21-205ENST00000558339 MPRIPQ6WCQ1 1025 aa30.6■■■□□ 2.49
SPG21-205ENST00000558339 PALLDQ8WX93 1383 aa30.6■■■□□ 2.49
SPG21-205ENST00000558339 WASHC2AQ641Q2 1341 aa30.59■■■□□ 2.49
SPG21-205ENST00000558339 NLGN2Q8NFZ4 835 aa30.59■■■□□ 2.49
SPG21-205ENST00000558339 C5P01031 1676 aa30.58■■■□□ 2.49
SPG21-205ENST00000558339 CLSPNQ9HAW4 1339 aa30.57■■■□□ 2.48
SPG21-205ENST00000558339 GPR162Q16538 588 aa30.57■■■□□ 2.48
SPG21-205ENST00000558339 MSH5O43196 834 aa30.56■■■□□ 2.48
SPG21-205ENST00000558339 EYA1Q99502 592 aa30.56■■■□□ 2.48
SPG21-205ENST00000558339 POLKQ9UBT6 870 aa30.56■■■□□ 2.48
SPG21-205ENST00000558339 NKX1-1Q15270 411 aaPredicted RBP30.55■■■□□ 2.48
SPG21-205ENST00000558339 CHD4Q14839 1912 aa30.55■■■□□ 2.48
SPG21-205ENST00000558339 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
SPG21-205ENST00000558339 MSL1Q68DK7 614 aa30.53■■■□□ 2.48
SPG21-205ENST00000558339 PIGBQ92521 554 aa30.53■■■□□ 2.48
SPG21-205ENST00000558339 ITGB4P16144 1822 aa30.52■■■□□ 2.48
SPG21-205ENST00000558339 TAF1LQ8IZX4 1826 aa30.52■■■□□ 2.48
SPG21-205ENST00000558339 AMIGO3Q86WK7 504 aa30.51■■■□□ 2.47
SPG21-205ENST00000558339 POLR3GLQ9BT43 218 aa30.51■■■□□ 2.47
SPG21-205ENST00000558339 SPG7Q9UQ90 795 aa30.51■■■□□ 2.47
SPG21-205ENST00000558339 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
SPG21-205ENST00000558339 SMARCC1Q92922 1105 aaPredicted RBP30.5■■■□□ 2.47
SPG21-205ENST00000558339 PELP1Q8IZL8 1130 aaKnown RBP30.49■■■□□ 2.47
SPG21-205ENST00000558339 C4BP0C0L5 1744 aa30.48■■■□□ 2.47
SPG21-205ENST00000558339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.48■■■□□ 2.47
SPG21-205ENST00000558339 EIF4A2Q14240 407 aaKnown RBP30.47■■■□□ 2.47
SPG21-205ENST00000558339 TNNT2P45379 298 aaPredicted RBP30.46■■■□□ 2.47
SPG21-205ENST00000558339 FLAD1Q8NFF5 587 aa30.46■■■□□ 2.47
SPG21-205ENST00000558339 YBX3P16989 372 aaKnown RBP eCLIP30.45■■■□□ 2.47
SPG21-205ENST00000558339 SMIM5Q71RC9 77 aa30.45■■■□□ 2.47
SPG21-205ENST00000558339 PHKG2P15735 406 aa30.44■■■□□ 2.46
SPG21-205ENST00000558339 HSPA5P11021 654 aaKnown RBP30.43■■■□□ 2.46
SPG21-205ENST00000558339 HMGB2P26583 209 aaKnown RBP30.43■■■□□ 2.46
SPG21-205ENST00000558339 AK7Q96M32 723 aa30.43■■■□□ 2.46
SPG21-205ENST00000558339 LINC00116Q8NCU8 138 aa30.42■■■□□ 2.46
SPG21-205ENST00000558339 LOC102724428A0A0B4J2F2 783 aa30.41■■■□□ 2.46
SPG21-205ENST00000558339 SIK1P57059 783 aa30.41■■■□□ 2.46
SPG21-205ENST00000558339 EIF4G2P78344 907 aaKnown RBP eCLIP30.41■■■□□ 2.464e-8■■■■□ 26.7
SPG21-205ENST00000558339 IFNL2Q8IZJ0 200 aa30.41■■■□□ 2.46
SPG21-205ENST00000558339 ASAP1Q9ULH1 1129 aa30.41■■■□□ 2.46
SPG21-205ENST00000558339 TMOD3Q9NYL9 352 aa30.4■■■□□ 2.46
SPG21-205ENST00000558339 UBR3Q6ZT12 1888 aa30.4■■■□□ 2.46
SPG21-205ENST00000558339 PANK3Q9H999 370 aa30.39■■■□□ 2.46
SPG21-205ENST00000558339 IGSF1Q8N6C5 1336 aa30.39■■■□□ 2.46
SPG21-205ENST00000558339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.38■■■□□ 2.45
SPG21-205ENST00000558339 PHF14O94880 888 aa30.38■■■□□ 2.45
SPG21-205ENST00000558339 ITPK1Q13572 414 aa30.38■■■□□ 2.45
SPG21-205ENST00000558339 CD2APQ9Y5K6 639 aa30.38■■■□□ 2.45
SPG21-205ENST00000558339 ATG3Q9NT62 314 aa30.36■■■□□ 2.45
SPG21-205ENST00000558339 PLEKHG2Q9H7P9 1386 aa30.36■■■□□ 2.45
SPG21-205ENST00000558339 GRIN3BO60391 1043 aa30.35■■■□□ 2.45
SPG21-205ENST00000558339 SSFA2P28290 1259 aa30.35■■■□□ 2.45
SPG21-205ENST00000558339 C1QTNF8P60827 252 aa30.33■■■□□ 2.45
SPG21-205ENST00000558339 ATP6V1AP38606 617 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms