RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 LMOD2Q6P5Q4 547 aa12.15□□□□□ -0.46
SHC4-205ENST00000558220 DCAF11Q8TEB1 546 aa12.15□□□□□ -0.46
SHC4-205ENST00000558220 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
SHC4-205ENST00000558220 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 ADGRB1O14514 1584 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 PTPREP23469 700 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 VPS72Q15906 364 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
SHC4-205ENST00000558220 TRAK1Q9UPV9 953 aa12.14□□□□□ -0.47
SHC4-205ENST00000558220 GLI3P10071 1580 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 PDE4AP27815 886 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
SHC4-205ENST00000558220 ITSN1Q15811 1721 aa12.12□□□□□ -0.47
SHC4-205ENST00000558220 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
SHC4-205ENST00000558220 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
SHC4-205ENST00000558220 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
SHC4-205ENST00000558220 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
SHC4-205ENST00000558220 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
SHC4-205ENST00000558220 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
SHC4-205ENST00000558220 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
SHC4-205ENST00000558220 EVI5O60447 810 aa12.11□□□□□ -0.47
SHC4-205ENST00000558220 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
SHC4-205ENST00000558220 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
SHC4-205ENST00000558220 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
SHC4-205ENST00000558220 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SHC4-205ENST00000558220 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
SHC4-205ENST00000558220 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
SHC4-205ENST00000558220 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
SHC4-205ENST00000558220 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
SHC4-205ENST00000558220 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
SHC4-205ENST00000558220 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
SHC4-205ENST00000558220 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
SHC4-205ENST00000558220 ARHGEF28Q8N1W1 1705 aaKnown RBP12.08□□□□□ -0.47
SHC4-205ENST00000558220 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
SHC4-205ENST00000558220 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
SHC4-205ENST00000558220 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
SHC4-205ENST00000558220 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
SHC4-205ENST00000558220 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
SHC4-205ENST00000558220 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
SHC4-205ENST00000558220 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 A0A0G2JS52 829 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
SHC4-205ENST00000558220 MYT1Q01538 1121 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 WNT2BQ93097 391 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
SHC4-205ENST00000558220 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
SHC4-205ENST00000558220 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
SHC4-205ENST00000558220 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
SHC4-205ENST00000558220 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
SHC4-205ENST00000558220 ATP7BP35670 1465 aa12.04□□□□□ -0.48
SHC4-205ENST00000558220 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
SHC4-205ENST00000558220 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
SHC4-205ENST00000558220 BAG6P46379 1132 aa12.03□□□□□ -0.48
SHC4-205ENST00000558220 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
SHC4-205ENST00000558220 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
SHC4-205ENST00000558220 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
SHC4-205ENST00000558220 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 NBPF3Q9H094 633 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 RGPD1P0DJD0 1748 aa12.02□□□□□ -0.49
SHC4-205ENST00000558220 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
SHC4-205ENST00000558220 MFSD10Q14728 455 aa12.01□□□□□ -0.49
SHC4-205ENST00000558220 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
SHC4-205ENST00000558220 PHRF1Q9P1Y6 1649 aaKnown RBP12□□□□□ -0.49
SHC4-205ENST00000558220 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
SHC4-205ENST00000558220 RGS20O76081 388 aa12□□□□□ -0.49
SHC4-205ENST00000558220 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
SHC4-205ENST00000558220 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
SHC4-205ENST00000558220 EVA1CP58658 441 aa11.99□□□□□ -0.49
SHC4-205ENST00000558220 ACEP12821 1306 aa11.99□□□□□ -0.49
SHC4-205ENST00000558220 BRD4O60885 1362 aaPredicted RBP11.99□□□□□ -0.49
SHC4-205ENST00000558220 KIAA0232Q92628 1395 aa11.99□□□□□ -0.49
SHC4-205ENST00000558220 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
SHC4-205ENST00000558220 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
SHC4-205ENST00000558220 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
SHC4-205ENST00000558220 PCDHGA10Q9Y5H3 936 aa11.98□□□□□ -0.49
SHC4-205ENST00000558220 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
SHC4-205ENST00000558220 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
SHC4-205ENST00000558220 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
SHC4-205ENST00000558220 SRPK2P78362 688 aaKnown RBP11.97□□□□□ -0.49
SHC4-205ENST00000558220 FAM196AQ6ZSG2 479 aa11.97□□□□□ -0.49
SHC4-205ENST00000558220 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
SHC4-205ENST00000558220 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.49
SHC4-205ENST00000558220 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
SHC4-205ENST00000558220 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
SHC4-205ENST00000558220 CPDO75976 1380 aa11.95□□□□□ -0.5
SHC4-205ENST00000558220 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
SHC4-205ENST00000558220 COL9A1P20849 921 aa11.95□□□□□ -0.5
SHC4-205ENST00000558220 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
SHC4-205ENST00000558220 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
SHC4-205ENST00000558220 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
SHC4-205ENST00000558220 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
SHC4-205ENST00000558220 LRP5O75197 1615 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms