RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
IGKV2D-28-202ENST00000558026 NLRP2Q9NX02 1062 aa14.32□□□□□ -0.12
IGKV2D-28-202ENST00000558026 NSD2O96028 1365 aa14.32□□□□□ -0.12
IGKV2D-28-202ENST00000558026 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
IGKV2D-28-202ENST00000558026 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
IGKV2D-28-202ENST00000558026 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
IGKV2D-28-202ENST00000558026 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
IGKV2D-28-202ENST00000558026 RRAGCQ9HB90 399 aa14.3□□□□□ -0.12
IGKV2D-28-202ENST00000558026 ERBB3P21860 1342 aa14.3□□□□□ -0.12
IGKV2D-28-202ENST00000558026 C5P01031 1676 aa14.3□□□□□ -0.12
IGKV2D-28-202ENST00000558026 N4BP2Q86UW6 1770 aaPredicted RBP14.29□□□□□ -0.12
IGKV2D-28-202ENST00000558026 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
IGKV2D-28-202ENST00000558026 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
IGKV2D-28-202ENST00000558026 QRICH2Q9H0J4 1663 aa14.29□□□□□ -0.12
IGKV2D-28-202ENST00000558026 FOXN1O15353 648 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 NFAT5O94916 1531 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 PKD1L3Q7Z443 1732 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 KIAA1551Q9HCM1 1747 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
IGKV2D-28-202ENST00000558026 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
IGKV2D-28-202ENST00000558026 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
IGKV2D-28-202ENST00000558026 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
IGKV2D-28-202ENST00000558026 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
IGKV2D-28-202ENST00000558026 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
IGKV2D-28-202ENST00000558026 TOGARAM1Q9Y4F4 1720 aa14.26□□□□□ -0.13
IGKV2D-28-202ENST00000558026 TNRC6CQ9HCJ0 1690 aaKnown RBP14.26□□□□□ -0.13
IGKV2D-28-202ENST00000558026 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
IGKV2D-28-202ENST00000558026 KIAA1210Q9ULL0 1709 aa14.25□□□□□ -0.13
IGKV2D-28-202ENST00000558026 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
IGKV2D-28-202ENST00000558026 PLEKHG2Q9H7P9 1386 aa14.24□□□□□ -0.13
IGKV2D-28-202ENST00000558026 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
IGKV2D-28-202ENST00000558026 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
IGKV2D-28-202ENST00000558026 MLLT1Q03111 559 aaPredicted RBP14.24□□□□□ -0.13
IGKV2D-28-202ENST00000558026 PHF14O94880 888 aa14.23□□□□□ -0.13
IGKV2D-28-202ENST00000558026 FLAD1Q8NFF5 587 aa14.23□□□□□ -0.13
IGKV2D-28-202ENST00000558026 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
IGKV2D-28-202ENST00000558026 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
IGKV2D-28-202ENST00000558026 USP47Q96K76 1375 aa14.22□□□□□ -0.13
IGKV2D-28-202ENST00000558026 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
IGKV2D-28-202ENST00000558026 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
IGKV2D-28-202ENST00000558026 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.13
IGKV2D-28-202ENST00000558026 ANKRD24Q8TF21 1146 aa14.21□□□□□ -0.13
IGKV2D-28-202ENST00000558026 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
IGKV2D-28-202ENST00000558026 C4BP0C0L5 1744 aa14.21□□□□□ -0.14
IGKV2D-28-202ENST00000558026 TTC21BQ7Z4L5 1316 aa14.2□□□□□ -0.14
IGKV2D-28-202ENST00000558026 FCHSD2O94868 740 aa14.2□□□□□ -0.14
IGKV2D-28-202ENST00000558026 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
IGKV2D-28-202ENST00000558026 BRCA1P38398 1863 aaKnown RBP14.2□□□□□ -0.14
IGKV2D-28-202ENST00000558026 LTN1O94822 1766 aa14.19□□□□□ -0.14
IGKV2D-28-202ENST00000558026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.19□□□□□ -0.14
IGKV2D-28-202ENST00000558026 MMP10P09238 476 aa14.17□□□□□ -0.14
IGKV2D-28-202ENST00000558026 DPEP1P16444 411 aa14.17□□□□□ -0.14
IGKV2D-28-202ENST00000558026 LBX1P52954 281 aa14.17□□□□□ -0.14
IGKV2D-28-202ENST00000558026 AK7Q96M32 723 aa14.17□□□□□ -0.14
IGKV2D-28-202ENST00000558026 ARFGEF1Q9Y6D6 1849 aa14.17□□□□□ -0.14
IGKV2D-28-202ENST00000558026 SBF1O95248 1867 aa14.16□□□□□ -0.14
IGKV2D-28-202ENST00000558026 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
IGKV2D-28-202ENST00000558026 TGFB2P61812 414 aa14.16□□□□□ -0.14
IGKV2D-28-202ENST00000558026 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
IGKV2D-28-202ENST00000558026 CCDC85CA6NKD9 419 aa14.15□□□□□ -0.14
IGKV2D-28-202ENST00000558026 RGS19P49795 217 aa14.15□□□□□ -0.14
IGKV2D-28-202ENST00000558026 AIDAQ96BJ3 306 aa14.13□□□□□ -0.15
IGKV2D-28-202ENST00000558026 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
IGKV2D-28-202ENST00000558026 KCNA3P22001 575 aa14.12□□□□□ -0.15
IGKV2D-28-202ENST00000558026 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
IGKV2D-28-202ENST00000558026 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
IGKV2D-28-202ENST00000558026 ZCRB1Q8TBF4 217 aaKnown RBP14.11□□□□□ -0.15
IGKV2D-28-202ENST00000558026 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
IGKV2D-28-202ENST00000558026 TNRC18O15417 2968 aaPredicted RBP14.11□□□□□ -0.15
IGKV2D-28-202ENST00000558026 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 RGPD2P0DJD1 1756 aa14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 SSFA2P28290 1259 aa14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 DCAF5Q96JK2 942 aa14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 MEGF6O75095 1541 aa14.1□□□□□ -0.15
IGKV2D-28-202ENST00000558026 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
IGKV2D-28-202ENST00000558026 NBPF1Q3BBV0 1214 aa14.09□□□□□ -0.15
IGKV2D-28-202ENST00000558026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
IGKV2D-28-202ENST00000558026 NSD3Q9BZ95 1437 aa14.08□□□□□ -0.15
IGKV2D-28-202ENST00000558026 HSPA8P11142 646 aaKnown RBP14.08□□□□□ -0.16
IGKV2D-28-202ENST00000558026 RASSF7Q02833 373 aa14.08□□□□□ -0.16
IGKV2D-28-202ENST00000558026 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
IGKV2D-28-202ENST00000558026 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.16
IGKV2D-28-202ENST00000558026 WBP1LQ9NX94 342 aa14.08□□□□□ -0.16
IGKV2D-28-202ENST00000558026 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
IGKV2D-28-202ENST00000558026 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
IGKV2D-28-202ENST00000558026 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
IGKV2D-28-202ENST00000558026 NME9Q86XW9 330 aa14.07□□□□□ -0.16
IGKV2D-28-202ENST00000558026 POTECB2RU33 542 aa14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 GNPATO15228 680 aa14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 VEGFBP49765 207 aa14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 PIM2Q9P1W9 311 aa14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 C4AP0C0L4 1744 aa14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
IGKV2D-28-202ENST00000558026 DALRD3Q5D0E6 543 aaKnown RBP14.05□□□□□ -0.16
IGKV2D-28-202ENST00000558026 CFAP44Q96MT7 982 aa14.05□□□□□ -0.16
IGKV2D-28-202ENST00000558026 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms