RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 UPF1Q92900 1129 aaKnown RBP eCLIP22.51■■□□□ 1.19
PBX4-202ENST00000557978 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
PBX4-202ENST00000557978 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
PBX4-202ENST00000557978 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
PBX4-202ENST00000557978 MARCH10Q8NA82 808 aaPredicted RBP22.48■■□□□ 1.19
PBX4-202ENST00000557978 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
PBX4-202ENST00000557978 MYBBP1AQ9BQG0 1328 aaKnown RBP22.47■■□□□ 1.19
PBX4-202ENST00000557978 SULT6B1Q6IMI4 303 aa22.47■■□□□ 1.19
PBX4-202ENST00000557978 PRKRIP1Q9H875 184 aaPredicted RBP22.47■■□□□ 1.19
PBX4-202ENST00000557978 KDRP35968 1356 aa22.46■■□□□ 1.19
PBX4-202ENST00000557978 DDX54Q8TDD1 881 aaKnown RBP22.46■■□□□ 1.19
PBX4-202ENST00000557978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
PBX4-202ENST00000557978 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
PBX4-202ENST00000557978 BCL9O00512 1426 aa22.46■■□□□ 1.19
PBX4-202ENST00000557978 SF3B2Q13435 895 aaKnown RBP22.45■■□□□ 1.18
PBX4-202ENST00000557978 TNS1Q9HBL0 1735 aaKnown RBP22.45■■□□□ 1.18
PBX4-202ENST00000557978 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
PBX4-202ENST00000557978 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
PBX4-202ENST00000557978 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
PBX4-202ENST00000557978 VIRMAQ69YN4 1812 aaKnown RBP22.42■■□□□ 1.18
PBX4-202ENST00000557978 AEBP1Q8IUX7 1158 aa22.41■■□□□ 1.18
PBX4-202ENST00000557978 NHSQ6T4R5 1651 aa22.41■■□□□ 1.18
PBX4-202ENST00000557978 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
PBX4-202ENST00000557978 TRIM37O94972 964 aa22.4■■□□□ 1.18
PBX4-202ENST00000557978 HMOX1P09601 288 aa22.4■■□□□ 1.18
PBX4-202ENST00000557978 AMOTQ4VCS5 1084 aa22.4■■□□□ 1.18
PBX4-202ENST00000557978 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
PBX4-202ENST00000557978 ITGB4P16144 1822 aa22.39■■□□□ 1.17
PBX4-202ENST00000557978 ANP32CO43423 234 aa22.39■■□□□ 1.17
PBX4-202ENST00000557978 CYP27B1O15528 508 aa22.37■■□□□ 1.17
PBX4-202ENST00000557978 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
PBX4-202ENST00000557978 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
PBX4-202ENST00000557978 IFNL2Q8IZJ0 200 aa22.37■■□□□ 1.17
PBX4-202ENST00000557978 BTAF1O14981 1849 aa22.36■■□□□ 1.17
PBX4-202ENST00000557978 BCL11BQ9C0K0 894 aaPredicted RBP22.36■■□□□ 1.17
PBX4-202ENST00000557978 BAG6P46379 1132 aa22.35■■□□□ 1.17
PBX4-202ENST00000557978 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
PBX4-202ENST00000557978 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
PBX4-202ENST00000557978 FCHSD2O94868 740 aa22.33■■□□□ 1.17
PBX4-202ENST00000557978 APBA3O96018 575 aa22.33■■□□□ 1.17
PBX4-202ENST00000557978 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.17
PBX4-202ENST00000557978 ACSBG1Q96GR2 724 aa22.33■■□□□ 1.17
PBX4-202ENST00000557978 SCN11AQ9UI33 1791 aa22.33■■□□□ 1.16
PBX4-202ENST00000557978 HSP90AB1P08238 724 aaKnown RBP22.32■■□□□ 1.16
PBX4-202ENST00000557978 PHKG2P15735 406 aa22.32■■□□□ 1.16
PBX4-202ENST00000557978 C1orf141Q5JVX7 400 aa22.32■■□□□ 1.16
PBX4-202ENST00000557978 ZNF530Q6P9A1 599 aaPredicted RBP22.32■■□□□ 1.16
PBX4-202ENST00000557978 TOGARAM1Q9Y4F4 1720 aa22.31■■□□□ 1.16
PBX4-202ENST00000557978 RSPH6AQ9H0K4 717 aa22.31■■□□□ 1.16
PBX4-202ENST00000557978 PNNQ9H307 717 aaKnown RBP22.31■■□□□ 1.16
PBX4-202ENST00000557978 KCNQ2O43526 872 aa22.3■■□□□ 1.16
PBX4-202ENST00000557978 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
PBX4-202ENST00000557978 NEFMP07197 916 aa22.29■■□□□ 1.16
PBX4-202ENST00000557978 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
PBX4-202ENST00000557978 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
PBX4-202ENST00000557978 DLG5Q8TDM6 1919 aa22.28■■□□□ 1.16
PBX4-202ENST00000557978 PLSCR1O15162 318 aa22.28■■□□□ 1.16
PBX4-202ENST00000557978 PRIM1P49642 420 aaKnown RBP22.28■■□□□ 1.16
PBX4-202ENST00000557978 AKAP4Q5JQC9 854 aa22.28■■□□□ 1.16
PBX4-202ENST00000557978 EN1Q05925 392 aaPredicted RBP22.27■■□□□ 1.16
PBX4-202ENST00000557978 MTHFSDQ2M296 383 aaKnown RBP22.27■■□□□ 1.16
PBX4-202ENST00000557978 GAS2L2Q8NHY3 880 aa22.27■■□□□ 1.16
PBX4-202ENST00000557978 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
PBX4-202ENST00000557978 WDR43Q15061 677 aaKnown RBP eCLIP22.26■■□□□ 1.15
PBX4-202ENST00000557978 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
PBX4-202ENST00000557978 RREB1Q92766 1687 aa22.26■■□□□ 1.15
PBX4-202ENST00000557978 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
PBX4-202ENST00000557978 LY75O60449 1722 aa22.23■■□□□ 1.15
PBX4-202ENST00000557978 ERVV-2B6SEH9 535 aa22.23■■□□□ 1.15
PBX4-202ENST00000557978 EZH2Q15910 746 aaKnown RBP22.23■■□□□ 1.15
PBX4-202ENST00000557978 MPRIPQ6WCQ1 1025 aa22.23■■□□□ 1.15
PBX4-202ENST00000557978 PHACTR3Q96KR7 559 aa22.23■■□□□ 1.15
PBX4-202ENST00000557978 ADAMTS7Q9UKP4 1686 aa22.22■■□□□ 1.15
PBX4-202ENST00000557978 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
PBX4-202ENST00000557978 MAPK8IP3Q9UPT6 1336 aa22.2■■□□□ 1.15
PBX4-202ENST00000557978 NUP188Q5SRE5 1749 aa22.2■■□□□ 1.14
PBX4-202ENST00000557978 KDM6AO15550 1401 aaPredicted RBP22.2■■□□□ 1.14
PBX4-202ENST00000557978 GNAT3A8MTJ3 354 aa22.2■■□□□ 1.14
PBX4-202ENST00000557978 PLEKHF1Q96S99 279 aa22.2■■□□□ 1.14
PBX4-202ENST00000557978 MAP3K5Q99683 1374 aa22.19■■□□□ 1.14
PBX4-202ENST00000557978 CABP4P57796 275 aa22.17■■□□□ 1.14
PBX4-202ENST00000557978 PIGBQ92521 554 aa22.17■■□□□ 1.14
PBX4-202ENST00000557978 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
PBX4-202ENST00000557978 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
PBX4-202ENST00000557978 RNMTO43148 476 aaKnown RBP22.16■■□□□ 1.14
PBX4-202ENST00000557978 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
PBX4-202ENST00000557978 SIPA1L3O60292 1781 aaPredicted RBP22.16■■□□□ 1.14
PBX4-202ENST00000557978 TXNRD1Q16881 649 aa22.15■■□□□ 1.14
PBX4-202ENST00000557978 LGR6Q9HBX8 967 aa22.15■■□□□ 1.14
PBX4-202ENST00000557978 TAF1LQ8IZX4 1826 aa22.15■■□□□ 1.14
PBX4-202ENST00000557978 CCDC184Q52MB2 194 aa22.14■■□□□ 1.14
PBX4-202ENST00000557978 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.14
PBX4-202ENST00000557978 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
PBX4-202ENST00000557978 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
PBX4-202ENST00000557978 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
PBX4-202ENST00000557978 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
PBX4-202ENST00000557978 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
PBX4-202ENST00000557978 MRC1P22897 1456 aa22.13■■□□□ 1.13
PBX4-202ENST00000557978 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
PBX4-202ENST00000557978 SLC27A3Q5K4L6 730 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms