RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 MCM4P33991 863 aa16.57■□□□□ 0.24
CPNE6-204ENST00000557829 NUCB1Q02818 461 aa16.57■□□□□ 0.24
CPNE6-204ENST00000557829 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
CPNE6-204ENST00000557829 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
CPNE6-204ENST00000557829 SOX12O15370 315 aa16.56■□□□□ 0.24
CPNE6-204ENST00000557829 TOM1O60784 492 aa16.56■□□□□ 0.24
CPNE6-204ENST00000557829 RBM25P49756 843 aaKnown RBP16.56■□□□□ 0.24
CPNE6-204ENST00000557829 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
CPNE6-204ENST00000557829 SNX21Q969T3 373 aa16.56■□□□□ 0.24
CPNE6-204ENST00000557829 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
CPNE6-204ENST00000557829 NLRP6P59044 892 aa16.55■□□□□ 0.24
CPNE6-204ENST00000557829 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
CPNE6-204ENST00000557829 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
CPNE6-204ENST00000557829 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
CPNE6-204ENST00000557829 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
CPNE6-204ENST00000557829 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
CPNE6-204ENST00000557829 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
CPNE6-204ENST00000557829 ROBO1Q9Y6N7 1651 aa16.54■□□□□ 0.24
CPNE6-204ENST00000557829 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
CPNE6-204ENST00000557829 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
CPNE6-204ENST00000557829 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
CPNE6-204ENST00000557829 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.24
CPNE6-204ENST00000557829 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
CPNE6-204ENST00000557829 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
CPNE6-204ENST00000557829 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
CPNE6-204ENST00000557829 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
CPNE6-204ENST00000557829 DDIT3P35638 169 aa16.51■□□□□ 0.23
CPNE6-204ENST00000557829 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
CPNE6-204ENST00000557829 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
CPNE6-204ENST00000557829 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
CPNE6-204ENST00000557829 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
CPNE6-204ENST00000557829 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
CPNE6-204ENST00000557829 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
CPNE6-204ENST00000557829 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
CPNE6-204ENST00000557829 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
CPNE6-204ENST00000557829 TRPM3Q9HCF6 1732 aaPredicted RBP16.49■□□□□ 0.23
CPNE6-204ENST00000557829 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
CPNE6-204ENST00000557829 TRAK2O60296 914 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 HSPA1LP34931 641 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 GNAI1P63096 354 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
CPNE6-204ENST00000557829 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
CPNE6-204ENST00000557829 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 VAMP4O75379 141 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 PTMSP20962 102 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 PRKAR2BP31323 418 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 IL13P35225 146 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
CPNE6-204ENST00000557829 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
CPNE6-204ENST00000557829 LTN1O94822 1766 aa16.46■□□□□ 0.22
CPNE6-204ENST00000557829 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
CPNE6-204ENST00000557829 CFAP44Q96MT7 982 aa16.45■□□□□ 0.22
CPNE6-204ENST00000557829 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
CPNE6-204ENST00000557829 PXDNQ92626 1479 aa16.45■□□□□ 0.22
CPNE6-204ENST00000557829 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
CPNE6-204ENST00000557829 ABCC4O15439 1325 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 MRE11P49959 708 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 SBNO1A3KN83 1393 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 HMOX1P09601 288 aa16.44■□□□□ 0.22
CPNE6-204ENST00000557829 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
CPNE6-204ENST00000557829 NFAT5O94916 1531 aa16.43■□□□□ 0.22
CPNE6-204ENST00000557829 AMPHP49418 695 aa16.43■□□□□ 0.22
CPNE6-204ENST00000557829 FLT4P35916 1363 aa16.42■□□□□ 0.22
CPNE6-204ENST00000557829 SKOR2Q2VWA4 1001 aaPredicted RBP16.42■□□□□ 0.22
CPNE6-204ENST00000557829 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
CPNE6-204ENST00000557829 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
CPNE6-204ENST00000557829 ALS2Q96Q42 1657 aa16.42■□□□□ 0.22
CPNE6-204ENST00000557829 GCP02774 474 aa16.41■□□□□ 0.22
CPNE6-204ENST00000557829 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
CPNE6-204ENST00000557829 SLIT3O75094 1523 aa16.41■□□□□ 0.22
CPNE6-204ENST00000557829 TNS3Q68CZ2 1445 aa16.41■□□□□ 0.22
CPNE6-204ENST00000557829 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 HOXC9P31274 260 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 KCNH5Q8NCM2 988 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 KIF2CQ99661 725 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
CPNE6-204ENST00000557829 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
CPNE6-204ENST00000557829 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
CPNE6-204ENST00000557829 NHSL1Q5SYE7 1610 aa16.39■□□□□ 0.21
CPNE6-204ENST00000557829 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
CPNE6-204ENST00000557829 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
CPNE6-204ENST00000557829 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
CPNE6-204ENST00000557829 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
CPNE6-204ENST00000557829 RRAGDQ9NQL2 400 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-204ENST00000557829 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
CPNE6-204ENST00000557829 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-204ENST00000557829 AHDC1Q5TGY3 1603 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-204ENST00000557829 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-204ENST00000557829 CABLES1Q8TDN4 633 aa16.38■□□□□ 0.21
CPNE6-204ENST00000557829 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
CPNE6-204ENST00000557829 CDC45O75419 566 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms