RNA–Protein interactions for RNA: ENST00000557805.1

RCN2-204, Transcript of reticulocalbin 2, humanhuman

TSL 3

Gene RCN2, Length 691 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN2-204ENST00000557805 MTFR1LQ9H019 292 aa28.59■■■□□ 2.17
RCN2-204ENST00000557805 NSD3Q9BZ95 1437 aa28.59■■■□□ 2.17
RCN2-204ENST00000557805 RAPGEF4Q8WZA2 1011 aa28.58■■■□□ 2.17
RCN2-204ENST00000557805 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
RCN2-204ENST00000557805 SYTL4Q96C24 671 aaPredicted RBP28.57■■■□□ 2.16
RCN2-204ENST00000557805 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
RCN2-204ENST00000557805 NBPF6Q5VWK0 638 aa28.56■■■□□ 2.16
RCN2-204ENST00000557805 NBPF4Q96M43 638 aa28.56■■■□□ 2.16
RCN2-204ENST00000557805 ATF5Q9Y2D1 282 aaPredicted RBP28.55■■■□□ 2.16
RCN2-204ENST00000557805 PTGER2P43116 358 aa28.54■■■□□ 2.16
RCN2-204ENST00000557805 LY75O60449 1722 aa28.54■■■□□ 2.16
RCN2-204ENST00000557805 ANKRD26Q9UPS8 1709 aa28.53■■■□□ 2.16
RCN2-204ENST00000557805 TATP17735 454 aaPredicted RBP28.53■■■□□ 2.16
RCN2-204ENST00000557805 PRIM1P49642 420 aaKnown RBP28.52■■■□□ 2.16
RCN2-204ENST00000557805 CARD14Q9BXL6 1004 aa28.52■■■□□ 2.16
RCN2-204ENST00000557805 HSP90AB2PQ58FF8 381 aa28.51■■■□□ 2.15
RCN2-204ENST00000557805 USHBP1Q8N6Y0 703 aa28.51■■■□□ 2.15
RCN2-204ENST00000557805 LRRC4BQ9NT99 713 aa28.51■■■□□ 2.15
RCN2-204ENST00000557805 PCDH11XQ9BZA7 1347 aa28.5■■■□□ 2.15
RCN2-204ENST00000557805 PCDH11YQ9BZA8 1340 aa28.5■■■□□ 2.15
RCN2-204ENST00000557805 ZNF827Q17R98 1081 aa28.49■■■□□ 2.15
RCN2-204ENST00000557805 NSD2O96028 1365 aa28.49■■■□□ 2.15
RCN2-204ENST00000557805 YY1P25490 414 aa28.47■■■□□ 2.15
RCN2-204ENST00000557805 AKT1S1Q96B36 256 aa28.46■■■□□ 2.15
RCN2-204ENST00000557805 HMGB2P26583 209 aaKnown RBP28.45■■■□□ 2.14
RCN2-204ENST00000557805 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
RCN2-204ENST00000557805 EMILIN1Q9Y6C2 1016 aa28.45■■■□□ 2.14
RCN2-204ENST00000557805 PKD1L3Q7Z443 1732 aa28.45■■■□□ 2.14
RCN2-204ENST00000557805 MAP2P11137 1827 aaKnown RBP28.45■■■□□ 2.14
RCN2-204ENST00000557805 TUBGCP6Q96RT7 1819 aa28.44■■■□□ 2.14
RCN2-204ENST00000557805 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
RCN2-204ENST00000557805 FHDC1Q9C0D6 1143 aaPredicted RBP28.43■■■□□ 2.14
RCN2-204ENST00000557805 TFCP2L1Q9NZI6 479 aa28.43■■■□□ 2.14
RCN2-204ENST00000557805 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
RCN2-204ENST00000557805 EIF4G2P78344 907 aaKnown RBP eCLIP28.42■■■□□ 2.14
RCN2-204ENST00000557805 ARXQ96QS3 562 aa28.42■■■□□ 2.14
RCN2-204ENST00000557805 POLR3GLQ9BT43 218 aa28.42■■■□□ 2.14
RCN2-204ENST00000557805 CCNL1Q9UK58 526 aaPredicted RBP28.42■■■□□ 2.14
RCN2-204ENST00000557805 SYT17Q9BSW7 474 aa28.41■■■□□ 2.14
RCN2-204ENST00000557805 NCAPD2Q15021 1401 aa28.41■■■□□ 2.14
RCN2-204ENST00000557805 MAP3K5Q99683 1374 aa28.4■■■□□ 2.14
RCN2-204ENST00000557805 COL24A1Q17RW2 1714 aa28.4■■■□□ 2.14
RCN2-204ENST00000557805 WASHC2AQ641Q2 1341 aa28.4■■■□□ 2.14
RCN2-204ENST00000557805 POLD1P28340 1107 aa28.39■■■□□ 2.14
RCN2-204ENST00000557805 PNPLA7Q6ZV29 1317 aa28.39■■■□□ 2.13
RCN2-204ENST00000557805 C5P01031 1676 aa28.38■■■□□ 2.13
RCN2-204ENST00000557805 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
RCN2-204ENST00000557805 SPG7Q9UQ90 795 aa28.36■■■□□ 2.13
RCN2-204ENST00000557805 ITGB4P16144 1822 aa28.36■■■□□ 2.13
RCN2-204ENST00000557805 TOGARAM1Q9Y4F4 1720 aa28.35■■■□□ 2.13
RCN2-204ENST00000557805 KCNQ4P56696 695 aa28.35■■■□□ 2.13
RCN2-204ENST00000557805 CYP27B1O15528 508 aa28.33■■■□□ 2.13
RCN2-204ENST00000557805 PALLDQ8WX93 1383 aa28.33■■■□□ 2.13
RCN2-204ENST00000557805 HSPA5P11021 654 aaKnown RBP28.32■■■□□ 2.12
RCN2-204ENST00000557805 MPRIPQ6WCQ1 1025 aa28.32■■■□□ 2.12
RCN2-204ENST00000557805 SMARCC1Q92922 1105 aaPredicted RBP28.32■■■□□ 2.12
RCN2-204ENST00000557805 POLKQ9UBT6 870 aa28.32■■■□□ 2.12
RCN2-204ENST00000557805 PLEKHG2Q9H7P9 1386 aa28.32■■■□□ 2.12
RCN2-204ENST00000557805 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
RCN2-204ENST00000557805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.31■■■□□ 2.128e-7■■□□□ 11.5
RCN2-204ENST00000557805 EYA1Q99502 592 aa28.29■■■□□ 2.12
RCN2-204ENST00000557805 NKX1-1Q15270 411 aaPredicted RBP28.28■■■□□ 2.12
RCN2-204ENST00000557805 MSH5O43196 834 aa28.27■■■□□ 2.12
RCN2-204ENST00000557805 TNNT2P45379 298 aaPredicted RBP28.27■■■□□ 2.12
RCN2-204ENST00000557805 FLAD1Q8NFF5 587 aa28.27■■■□□ 2.12
RCN2-204ENST00000557805 UTRNP46939 3433 aa28.27■■■□□ 2.12
RCN2-204ENST00000557805 CHD4Q14839 1912 aa28.27■■■□□ 2.12
RCN2-204ENST00000557805 KLHL34Q8N239 644 aa28.25■■■□□ 2.11
RCN2-204ENST00000557805 PANK3Q9H999 370 aa28.25■■■□□ 2.11
RCN2-204ENST00000557805 C4BP0C0L5 1744 aa28.24■■■□□ 2.11
RCN2-204ENST00000557805 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
RCN2-204ENST00000557805 IFNL2Q8IZJ0 200 aa28.23■■■□□ 2.11
RCN2-204ENST00000557805 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
RCN2-204ENST00000557805 TMOD3Q9NYL9 352 aa28.22■■■□□ 2.11
RCN2-204ENST00000557805 PIGBQ92521 554 aa28.21■■■□□ 2.11
RCN2-204ENST00000557805 AK7Q96M32 723 aa28.2■■■□□ 2.1
RCN2-204ENST00000557805 PHKG2P15735 406 aa28.19■■■□□ 2.1
RCN2-204ENST00000557805 GPR162Q16538 588 aa28.19■■■□□ 2.1
RCN2-204ENST00000557805 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
RCN2-204ENST00000557805 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
RCN2-204ENST00000557805 UBR3Q6ZT12 1888 aa28.17■■■□□ 2.1
RCN2-204ENST00000557805 KNSTRNQ9Y448 316 aa28.16■■■□□ 2.1
RCN2-204ENST00000557805 LOC102724428A0A0B4J2F2 783 aa28.14■■■□□ 2.1
RCN2-204ENST00000557805 HSP90AB1P08238 724 aaKnown RBP28.14■■■□□ 2.1
RCN2-204ENST00000557805 SIK1P57059 783 aa28.14■■■□□ 2.1
RCN2-204ENST00000557805 PLEKHO1Q53GL0 409 aaPredicted RBP28.12■■■□□ 2.09
RCN2-204ENST00000557805 MSL1Q68DK7 614 aa28.12■■■□□ 2.09
RCN2-204ENST00000557805 PELP1Q8IZL8 1130 aaKnown RBP28.12■■■□□ 2.09
RCN2-204ENST00000557805 AMOTQ4VCS5 1084 aa28.11■■■□□ 2.09
RCN2-204ENST00000557805 SSFA2P28290 1259 aa28.1■■■□□ 2.09
RCN2-204ENST00000557805 DCAF5Q96JK2 942 aa28.1■■■□□ 2.09
RCN2-204ENST00000557805 GOLGB1Q14789 3259 aaKnown RBP28.1■■■□□ 2.09
RCN2-204ENST00000557805 ZNF831Q5JPB2 1677 aa28.1■■■□□ 2.09
RCN2-204ENST00000557805 ERVV-2B6SEH9 535 aa28.09■■■□□ 2.09
RCN2-204ENST00000557805 ZNF784Q8NCA9 323 aaPredicted RBP28.09■■■□□ 2.09
RCN2-204ENST00000557805 NLGN2Q8NFZ4 835 aa28.09■■■□□ 2.09
RCN2-204ENST00000557805 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
RCN2-204ENST00000557805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.07■■■□□ 2.08
RCN2-204ENST00000557805 PHF14O94880 888 aa28.07■■■□□ 2.08
RCN2-204ENST00000557805 ATP6V1AP38606 617 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms