RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
GABRB3-213ENST00000557765 IL2RBP14784 551 aa13.68□□□□□ -0.22
GABRB3-213ENST00000557765 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
GABRB3-213ENST00000557765 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
GABRB3-213ENST00000557765 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
GABRB3-213ENST00000557765 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
GABRB3-213ENST00000557765 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-213ENST00000557765 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
GABRB3-213ENST00000557765 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 NRAPQ86VF7 1730 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
GABRB3-213ENST00000557765 HSPA1LP34931 641 aa13.65□□□□□ -0.22
GABRB3-213ENST00000557765 VPS72Q15906 364 aa13.65□□□□□ -0.22
GABRB3-213ENST00000557765 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
GABRB3-213ENST00000557765 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
GABRB3-213ENST00000557765 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
GABRB3-213ENST00000557765 ZNF853P0CG23 659 aa13.64□□□□□ -0.23
GABRB3-213ENST00000557765 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
GABRB3-213ENST00000557765 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-213ENST00000557765 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
GABRB3-213ENST00000557765 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
GABRB3-213ENST00000557765 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 LRRC37A3O60309 1634 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
GABRB3-213ENST00000557765 HOXB7P09629 217 aa13.62□□□□□ -0.23
GABRB3-213ENST00000557765 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
GABRB3-213ENST00000557765 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-213ENST00000557765 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-213ENST00000557765 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
GABRB3-213ENST00000557765 LRP6O75581 1613 aa13.61□□□□□ -0.23
GABRB3-213ENST00000557765 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
GABRB3-213ENST00000557765 CHL1O00533 1208 aa13.61□□□□□ -0.23
GABRB3-213ENST00000557765 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
GABRB3-213ENST00000557765 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-213ENST00000557765 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
GABRB3-213ENST00000557765 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
GABRB3-213ENST00000557765 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 MEGF6O75095 1541 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 MS4A1P11836 297 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 TEFQ10587 303 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
GABRB3-213ENST00000557765 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-213ENST00000557765 STRN4Q9NRL3 753 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-213ENST00000557765 MRC1P22897 1456 aa13.6□□□□□ -0.23
GABRB3-213ENST00000557765 BCL9O00512 1426 aa13.59□□□□□ -0.23
GABRB3-213ENST00000557765 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
GABRB3-213ENST00000557765 EXOC5O00471 708 aa13.59□□□□□ -0.23
GABRB3-213ENST00000557765 PHKG2P15735 406 aa13.59□□□□□ -0.23
GABRB3-213ENST00000557765 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-213ENST00000557765 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
GABRB3-213ENST00000557765 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
GABRB3-213ENST00000557765 WNK3Q9BYP7 1800 aa13.58□□□□□ -0.24
GABRB3-213ENST00000557765 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-213ENST00000557765 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-213ENST00000557765 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-213ENST00000557765 USP21Q9UK80 565 aa13.58□□□□□ -0.24
GABRB3-213ENST00000557765 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
GABRB3-213ENST00000557765 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
GABRB3-213ENST00000557765 AAMPQ13685 434 aa13.57□□□□□ -0.24
GABRB3-213ENST00000557765 USHBP1Q8N6Y0 703 aa13.57□□□□□ -0.24
GABRB3-213ENST00000557765 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
GABRB3-213ENST00000557765 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
GABRB3-213ENST00000557765 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
GABRB3-213ENST00000557765 NEFLP07196 543 aa13.56□□□□□ -0.24
GABRB3-213ENST00000557765 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
GABRB3-213ENST00000557765 ATRNO75882 1429 aa13.56□□□□□ -0.24
GABRB3-213ENST00000557765 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
GABRB3-213ENST00000557765 DDB1Q16531 1140 aa13.55□□□□□ -0.24
GABRB3-213ENST00000557765 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
GABRB3-213ENST00000557765 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
GABRB3-213ENST00000557765 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
GABRB3-213ENST00000557765 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
GABRB3-213ENST00000557765 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
GABRB3-213ENST00000557765 KIF16BQ96L93 1317 aa13.54□□□□□ -0.24
GABRB3-213ENST00000557765 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
GABRB3-213ENST00000557765 CYP27B1O15528 508 aa13.53□□□□□ -0.24
GABRB3-213ENST00000557765 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
GABRB3-213ENST00000557765 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
GABRB3-213ENST00000557765 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-213ENST00000557765 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
GABRB3-213ENST00000557765 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
GABRB3-213ENST00000557765 MCM10Q7L590 875 aa13.52□□□□□ -0.25
GABRB3-213ENST00000557765 AFF2P51816 1311 aa13.52□□□□□ -0.25
GABRB3-213ENST00000557765 SIPA1L3O60292 1781 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-213ENST00000557765 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
GABRB3-213ENST00000557765 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms