RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.34
GPHN-216ENST00000557678 MTMR14Q8NCE2 650 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 NLRP3Q96P20 1036 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 PCDHB11Q9Y5F2 797 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 RHOQP17081 205 aa6.7□□□□□ -1.34
GPHN-216ENST00000557678 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
GPHN-216ENST00000557678 FOXD4L5Q5VV16 416 aaPredicted RBP6.7□□□□□ -1.34
GPHN-216ENST00000557678 COL25A1Q9BXS0 654 aaPredicted RBP6.7□□□□□ -1.34
GPHN-216ENST00000557678 SLC27A3Q5K4L6 730 aa6.69□□□□□ -1.34
GPHN-216ENST00000557678 CC2D2BQ6DHV5 1058 aa6.69□□□□□ -1.34
GPHN-216ENST00000557678 A0A1W2PRU2 124 aa6.68□□□□□ -1.34
GPHN-216ENST00000557678 XP32Q5T750 250 aa6.68□□□□□ -1.34
GPHN-216ENST00000557678 CYP2U1Q7Z449 544 aa6.68□□□□□ -1.34
GPHN-216ENST00000557678 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
GPHN-216ENST00000557678 KDF1Q8NAX2 398 aaPredicted RBP6.68□□□□□ -1.34
GPHN-216ENST00000557678 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
GPHN-216ENST00000557678 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
GPHN-216ENST00000557678 SENP3-EIF4A1A0A087X0R7 540 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
GPHN-216ENST00000557678 SCTRP47872 440 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
GPHN-216ENST00000557678 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 KRT76Q01546 638 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 NANOS1Q8WY41 292 aaKnown RBP6.66□□□□□ -1.34
GPHN-216ENST00000557678 GAS2L1Q99501 681 aaPredicted RBP6.66□□□□□ -1.34
GPHN-216ENST00000557678 RAB6BQ9NRW1 208 aa6.66□□□□□ -1.34
GPHN-216ENST00000557678 POU4F2Q12837 409 aa6.65□□□□□ -1.34
GPHN-216ENST00000557678 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.34
GPHN-216ENST00000557678 ARHGEF10LQ9HCE6 1279 aa6.65□□□□□ -1.34
GPHN-216ENST00000557678 SOCS7O14512 581 aa6.64□□□□□ -1.35
GPHN-216ENST00000557678 EIF4G2P78344 907 aaKnown RBP eCLIP6.64□□□□□ -1.35
GPHN-216ENST00000557678 RASSF7Q02833 373 aa6.64□□□□□ -1.35
GPHN-216ENST00000557678 FOXR1Q6PIV2 292 aa6.64□□□□□ -1.35
GPHN-216ENST00000557678 CEP126Q9P2H0 1117 aa6.64□□□□□ -1.35
GPHN-216ENST00000557678 GPR37L1O60883 481 aa6.63□□□□□ -1.35
GPHN-216ENST00000557678 GDF11O95390 407 aa6.63□□□□□ -1.35
GPHN-216ENST00000557678 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
GPHN-216ENST00000557678 GPC1P35052 558 aa6.63□□□□□ -1.35
GPHN-216ENST00000557678 ABL2P42684 1182 aa6.63□□□□□ -1.35
GPHN-216ENST00000557678 SLFNL1Q499Z3 407 aa6.63□□□□□ -1.35
GPHN-216ENST00000557678 CUEDC1Q9NWM3 386 aaPredicted RBP6.63□□□□□ -1.35
GPHN-216ENST00000557678 CLN3Q13286 438 aa6.62□□□□□ -1.35
GPHN-216ENST00000557678 TMEM151AQ8N4L1 468 aa6.62□□□□□ -1.35
GPHN-216ENST00000557678 OSBPL3Q9H4L5 887 aa6.62□□□□□ -1.35
GPHN-216ENST00000557678 GPR25O00155 361 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 PRKCSHP14314 528 aaPredicted RBP6.61□□□□□ -1.35
GPHN-216ENST00000557678 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 CCDC85AQ96PX6 553 aaPredicted RBP6.61□□□□□ -1.35
GPHN-216ENST00000557678 CDCA7Q9BWT1 371 aaPredicted RBP6.61□□□□□ -1.35
GPHN-216ENST00000557678 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 GDPD2Q9HCC8 539 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 TIMMDC1Q9NPL8 285 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 DOLKQ9UPQ8 538 aa6.61□□□□□ -1.35
GPHN-216ENST00000557678 H7C1W4 665 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 GNRH1P01148 92 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 PHKA2P46019 1235 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 NBPF10Q6P3W6 841 aaKnown RBP6.6□□□□□ -1.35
GPHN-216ENST00000557678 TAS1R3Q7RTX0 852 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 RNF135Q8IUD6 432 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 CNKSR1Q969H4 720 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 DYRK1BQ9Y463 629 aa6.6□□□□□ -1.35
GPHN-216ENST00000557678 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 TRAK2O60296 914 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 ADAMTS2O95450 1211 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 ZNF385CQ66K41 422 aaPredicted RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 GPAT2Q6NUI2 795 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 TMEM214Q6NUQ4 689 aaKnown RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 GTPBP3Q969Y2 492 aaKnown RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 ZNF837Q96EG3 531 aaPredicted RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 TRERF1Q96PN7 1200 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 ZSCAN10Q96SZ4 725 aaPredicted RBP6.59□□□□□ -1.35
GPHN-216ENST00000557678 GRIP2Q9C0E4 1043 aa6.59□□□□□ -1.35
GPHN-216ENST00000557678 CENPCQ03188 943 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 USP4Q13107 963 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 DBN1Q16643 649 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 GMCL1Q96IK5 515 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 ESYT1Q9BSJ8 1104 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 GPAMQ9HCL2 828 aa6.58□□□□□ -1.36
GPHN-216ENST00000557678 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
GPHN-216ENST00000557678 RNF225M0QZC1 329 aaPredicted RBP6.57□□□□□ -1.36
GPHN-216ENST00000557678 IL2RAP01589 272 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 SLURP2P0DP57 97 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 SEMA3FQ13275 785 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 IRF5Q13568 498 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 TSGA10IPQ3SY00 556 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 GNASQ5JWF2 1037 aa6.57□□□□□ -1.36
GPHN-216ENST00000557678 SPATA31C2B4DYI2 1134 aa6.56□□□□□ -1.36
GPHN-216ENST00000557678 SRSF11Q05519 484 aaKnown RBP6.56□□□□□ -1.36
GPHN-216ENST00000557678 GAS6Q14393 721 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms