RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 NBPF6Q5VWK0 638 aa32.07■■■□□ 2.72
RIPK3-207ENST00000557662 NBPF4Q96M43 638 aa32.07■■■□□ 2.72
RIPK3-207ENST00000557662 LRRC4BQ9NT99 713 aa32.07■■■□□ 2.72
RIPK3-207ENST00000557662 NSD3Q9BZ95 1437 aa32.07■■■□□ 2.72
RIPK3-207ENST00000557662 PKD1L3Q7Z443 1732 aa32.06■■■□□ 2.72
RIPK3-207ENST00000557662 FLT4P35916 1363 aa32.06■■■□□ 2.72
RIPK3-207ENST00000557662 DDX54Q8TDD1 881 aaKnown RBP32.05■■■□□ 2.72
RIPK3-207ENST00000557662 SGIP1Q9BQI5 828 aa32.05■■■□□ 2.72
RIPK3-207ENST00000557662 NCAPD2Q15021 1401 aa32.05■■■□□ 2.72
RIPK3-207ENST00000557662 ZBTB7AO95365 584 aa32.04■■■□□ 2.72
RIPK3-207ENST00000557662 SMG6Q86US8 1419 aaKnown RBP32.03■■■□□ 2.72
RIPK3-207ENST00000557662 ZCRB1Q8TBF4 217 aaKnown RBP32.03■■■□□ 2.72
RIPK3-207ENST00000557662 PPP1R1BQ9UD71 204 aaPredicted RBP32.03■■■□□ 2.72
RIPK3-207ENST00000557662 CGNL1Q0VF96 1302 aa32.02■■■□□ 2.72
RIPK3-207ENST00000557662 TOGARAM1Q9Y4F4 1720 aa32.01■■■□□ 2.72
RIPK3-207ENST00000557662 ZNF827Q17R98 1081 aa32.01■■■□□ 2.71
RIPK3-207ENST00000557662 HSP90AB2PQ58FF8 381 aa32.01■■■□□ 2.71
RIPK3-207ENST00000557662 ITGB4P16144 1822 aa32■■■□□ 2.71
RIPK3-207ENST00000557662 AKT1S1Q96B36 256 aa31.99■■■□□ 2.71
RIPK3-207ENST00000557662 MTFR1LQ9H019 292 aa31.99■■■□□ 2.71
RIPK3-207ENST00000557662 SLC27A3Q5K4L6 730 aa31.98■■■□□ 2.71
RIPK3-207ENST00000557662 PRIM1P49642 420 aaKnown RBP31.97■■■□□ 2.71
RIPK3-207ENST00000557662 USHBP1Q8N6Y0 703 aa31.97■■■□□ 2.71
RIPK3-207ENST00000557662 TAF1LQ8IZX4 1826 aa31.96■■■□□ 2.71
RIPK3-207ENST00000557662 ATF5Q9Y2D1 282 aaPredicted RBP31.96■■■□□ 2.71
RIPK3-207ENST00000557662 PCGF6Q9BYE7 350 aa31.94■■■□□ 2.7
RIPK3-207ENST00000557662 EMILIN1Q9Y6C2 1016 aa31.94■■■□□ 2.7
RIPK3-207ENST00000557662 C5P01031 1676 aa31.92■■■□□ 2.7
RIPK3-207ENST00000557662 UTRNP46939 3433 aa31.91■■■□□ 2.7
RIPK3-207ENST00000557662 RAPGEF4Q8WZA2 1011 aa31.91■■■□□ 2.7
RIPK3-207ENST00000557662 MAP3K5Q99683 1374 aa31.89■■■□□ 2.7
RIPK3-207ENST00000557662 TATP17735 454 aaPredicted RBP31.88■■■□□ 2.69
RIPK3-207ENST00000557662 SYTL4Q96C24 671 aaPredicted RBP31.88■■■□□ 2.69
RIPK3-207ENST00000557662 WASHC2AQ641Q2 1341 aa31.87■■■□□ 2.69
RIPK3-207ENST00000557662 PNPLA7Q6ZV29 1317 aa31.87■■■□□ 2.69
RIPK3-207ENST00000557662 PCDH11XQ9BZA7 1347 aa31.87■■■□□ 2.69
RIPK3-207ENST00000557662 PCDH11YQ9BZA8 1340 aa31.87■■■□□ 2.69
RIPK3-207ENST00000557662 CHD4Q14839 1912 aa31.85■■■□□ 2.69
RIPK3-207ENST00000557662 CYP27B1O15528 508 aa31.85■■■□□ 2.69
RIPK3-207ENST00000557662 SYT17Q9BSW7 474 aa31.85■■■□□ 2.69
RIPK3-207ENST00000557662 FHDC1Q9C0D6 1143 aaPredicted RBP31.85■■■□□ 2.69
RIPK3-207ENST00000557662 KCNQ4P56696 695 aa31.84■■■□□ 2.69
RIPK3-207ENST00000557662 SLC16A10Q8TF71 515 aa31.83■■■□□ 2.69
RIPK3-207ENST00000557662 POLKQ9UBT6 870 aa31.82■■■□□ 2.68
RIPK3-207ENST00000557662 HSPA5P11021 654 aaKnown RBP31.8■■■□□ 2.68
RIPK3-207ENST00000557662 EIF4G2P78344 907 aaKnown RBP eCLIP31.8■■■□□ 2.68
RIPK3-207ENST00000557662 ARXQ96QS3 562 aa31.79■■■□□ 2.68
RIPK3-207ENST00000557662 YY1P25490 414 aa31.78■■■□□ 2.68
RIPK3-207ENST00000557662 CCNL1Q9UK58 526 aaPredicted RBP31.78■■■□□ 2.68
RIPK3-207ENST00000557662 NKX1-1Q15270 411 aaPredicted RBP31.77■■■□□ 2.68
RIPK3-207ENST00000557662 EYA1Q99502 592 aa31.77■■■□□ 2.68
RIPK3-207ENST00000557662 UBR3Q6ZT12 1888 aa31.77■■■□□ 2.68
RIPK3-207ENST00000557662 PLEKHG2Q9H7P9 1386 aa31.77■■■□□ 2.68
RIPK3-207ENST00000557662 C4BP0C0L5 1744 aa31.75■■■□□ 2.67
RIPK3-207ENST00000557662 DCAF8L1A6NGE4 600 aa31.74■■■□□ 2.67
RIPK3-207ENST00000557662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.74■■■□□ 2.67
RIPK3-207ENST00000557662 TFCP2L1Q9NZI6 479 aa31.74■■■□□ 2.67
RIPK3-207ENST00000557662 PALLDQ8WX93 1383 aa31.73■■■□□ 2.67
RIPK3-207ENST00000557662 PPM1GO15355 546 aaPredicted RBP31.72■■■□□ 2.67
RIPK3-207ENST00000557662 EIF4A2Q14240 407 aaKnown RBP31.69■■■□□ 2.66
RIPK3-207ENST00000557662 PANK3Q9H999 370 aa31.69■■■□□ 2.66
RIPK3-207ENST00000557662 GOLGB1Q14789 3259 aaKnown RBP31.67■■■□□ 2.66
RIPK3-207ENST00000557662 MPRIPQ6WCQ1 1025 aa31.67■■■□□ 2.66
RIPK3-207ENST00000557662 COL23A1Q86Y22 540 aaPredicted RBP31.67■■■□□ 2.66
RIPK3-207ENST00000557662 POLR3GLQ9BT43 218 aa31.67■■■□□ 2.66
RIPK3-207ENST00000557662 SPG7Q9UQ90 795 aa31.67■■■□□ 2.66
RIPK3-207ENST00000557662 IGSF1Q8N6C5 1336 aa31.67■■■□□ 2.66
RIPK3-207ENST00000557662 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
RIPK3-207ENST00000557662 PIGBQ92521 554 aa31.66■■■□□ 2.66
RIPK3-207ENST00000557662 ZNF831Q5JPB2 1677 aa31.66■■■□□ 2.66
RIPK3-207ENST00000557662 POLD1P28340 1107 aa31.63■■■□□ 2.65
RIPK3-207ENST00000557662 SMARCC1Q92922 1105 aaPredicted RBP31.63■■■□□ 2.65
RIPK3-207ENST00000557662 PHKG2P15735 406 aa31.62■■■□□ 2.65
RIPK3-207ENST00000557662 TNNT2P45379 298 aaPredicted RBP31.61■■■□□ 2.65
RIPK3-207ENST00000557662 HMGB2P26583 209 aaKnown RBP31.6■■■□□ 2.65
RIPK3-207ENST00000557662 IFNL2Q8IZJ0 200 aa31.59■■■□□ 2.65
RIPK3-207ENST00000557662 AMIGO3Q86WK7 504 aa31.58■■■□□ 2.65
RIPK3-207ENST00000557662 COL5A3P25940 1745 aaPredicted RBP31.58■■■□□ 2.65
RIPK3-207ENST00000557662 FLAD1Q8NFF5 587 aa31.55■■■□□ 2.64
RIPK3-207ENST00000557662 KDRP35968 1356 aa31.54■■■□□ 2.64
RIPK3-207ENST00000557662 LOC102724428A0A0B4J2F2 783 aa31.53■■■□□ 2.64
RIPK3-207ENST00000557662 SIK1P57059 783 aa31.53■■■□□ 2.64
RIPK3-207ENST00000557662 NLGN2Q8NFZ4 835 aa31.53■■■□□ 2.64
RIPK3-207ENST00000557662 VIRMAQ69YN4 1812 aaKnown RBP31.52■■■□□ 2.64
RIPK3-207ENST00000557662 TMOD3Q9NYL9 352 aa31.52■■■□□ 2.64
RIPK3-207ENST00000557662 ASAP1Q9ULH1 1129 aa31.52■■■□□ 2.64
RIPK3-207ENST00000557662 SCN11AQ9UI33 1791 aa31.52■■■□□ 2.64
RIPK3-207ENST00000557662 KDM6AO15550 1401 aaPredicted RBP31.51■■■□□ 2.64
RIPK3-207ENST00000557662 AMER1Q5JTC6 1135 aaPredicted RBP31.51■■■□□ 2.63
RIPK3-207ENST00000557662 LINC00116Q8NCU8 138 aa31.5■■■□□ 2.63
RIPK3-207ENST00000557662 KIF7Q2M1P5 1343 aa31.49■■■□□ 2.63
RIPK3-207ENST00000557662 CICQ96RK0 1608 aaPredicted RBP31.49■■■□□ 2.63
RIPK3-207ENST00000557662 ITPK1Q13572 414 aa31.49■■■□□ 2.63
RIPK3-207ENST00000557662 MSL1Q68DK7 614 aa31.49■■■□□ 2.63
RIPK3-207ENST00000557662 MORC1Q86VD1 984 aa31.49■■■□□ 2.63
RIPK3-207ENST00000557662 ZNF784Q8NCA9 323 aaPredicted RBP31.49■■■□□ 2.63
RIPK3-207ENST00000557662 ATG3Q9NT62 314 aa31.49■■■□□ 2.63
RIPK3-207ENST00000557662 MYH14Q7Z406 1995 aaKnown RBP31.48■■■□□ 2.63
RIPK3-207ENST00000557662 MSH5O43196 834 aa31.48■■■□□ 2.63
RIPK3-207ENST00000557662 SSFA2P28290 1259 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms