RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OFD1O75665 1012 aa14.52□□□□□ -0.09
VIPAS39-211ENST00000557658 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-211ENST00000557658 KIAA1211Q6ZU35 1233 aa14.52□□□□□ -0.09
VIPAS39-211ENST00000557658 WAPLQ7Z5K2 1190 aa14.52□□□□□ -0.09
VIPAS39-211ENST00000557658 NME9Q86XW9 330 aa14.52□□□□□ -0.09
VIPAS39-211ENST00000557658 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
VIPAS39-211ENST00000557658 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-211ENST00000557658 PKP1Q13835 747 aa14.5□□□□□ -0.09
VIPAS39-211ENST00000557658 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
VIPAS39-211ENST00000557658 COG3Q96JB2 828 aa14.5□□□□□ -0.09
VIPAS39-211ENST00000557658 PRPF40AO75400 957 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 RGS12O14924 1447 aa14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 RTL1A6NKG5 1358 aa14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 ERC2O15083 957 aa14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 SMARCA5O60264 1052 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 FBXO31Q5XUX0 539 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 RBSNQ9H1K0 784 aa14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
VIPAS39-211ENST00000557658 PTPRCP08575 1304 aa14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 TERF1P54274 439 aa14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 MSH6P52701 1360 aa14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 APBB1O00213 710 aa14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 RRS1Q15050 365 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 PDLIM2Q96JY6 352 aa14.48□□□□□ -0.09
VIPAS39-211ENST00000557658 WASLO00401 505 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 PRIM1P49642 420 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 GPT2Q8TD30 523 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 HMMRO75330 724 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 NOL7Q9UMY1 257 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 ZDHHC9Q9Y397 364 aa14.47□□□□□ -0.09
VIPAS39-211ENST00000557658 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.09
VIPAS39-211ENST00000557658 SETD1AO15047 1707 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-211ENST00000557658 CHL1O00533 1208 aa14.46□□□□□ -0.09
VIPAS39-211ENST00000557658 MEIS3Q99687 375 aa14.46□□□□□ -0.09
VIPAS39-211ENST00000557658 PDCL3Q9H2J4 239 aa14.46□□□□□ -0.09
VIPAS39-211ENST00000557658 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 ZNF500O60304 480 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 KRT24Q2M2I5 525 aa14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 OSBPL3Q9H4L5 887 aa14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 CPS1P31327 1500 aa14.45□□□□□ -0.1
VIPAS39-211ENST00000557658 MBD3O95983 291 aa14.44□□□□□ -0.1
VIPAS39-211ENST00000557658 MCM2P49736 904 aa14.44□□□□□ -0.1
VIPAS39-211ENST00000557658 NRKQ7Z2Y5 1582 aa14.44□□□□□ -0.1
VIPAS39-211ENST00000557658 NUDT16Q96DE0 195 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-211ENST00000557658 MCM5P33992 734 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 SULT6B1Q6IMI4 303 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 C3P01024 1663 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
VIPAS39-211ENST00000557658 A2ML1A8K2U0 1454 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 NEK4P51957 841 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 PDE1AP54750 535 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 SYCE3A1L190 88 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 MCM10Q7L590 875 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 ZKSCAN5Q9Y2L8 839 aa14.42□□□□□ -0.1
VIPAS39-211ENST00000557658 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 MCCP23508 829 aa14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 EIF4A2Q14240 407 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 CCT4P50991 539 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 CSPP1Q1MSJ5 1256 aa14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 R3HCC1Q9Y3T6 440 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-211ENST00000557658 ZMYND15Q9H091 742 aa14.4□□□□□ -0.1
VIPAS39-211ENST00000557658 BRD1O95696 1058 aa14.4□□□□□ -0.1
VIPAS39-211ENST00000557658 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.4□□□□□ -0.1
VIPAS39-211ENST00000557658 FOXD4L5Q5VV16 416 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 CUL4AQ13619 759 aa14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 PKNOX2Q96KN3 472 aa14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 NSFL1CQ9UNZ2 370 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-211ENST00000557658 ANAPC15P60006 121 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 XPCQ01831 940 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 SLC4A10Q6U841 1118 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 INTS4Q96HW7 963 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 GNAI2P04899 355 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 MAP7D2Q96T17 732 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 CRB1P82279 1406 aa14.38□□□□□ -0.11
VIPAS39-211ENST00000557658 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
VIPAS39-211ENST00000557658 TUBGCP6Q96RT7 1819 aa14.37□□□□□ -0.11
VIPAS39-211ENST00000557658 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
VIPAS39-211ENST00000557658 NRXN3Q9Y4C0 1643 aa14.37□□□□□ -0.11
VIPAS39-211ENST00000557658 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 LRRCC1Q9C099 1032 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms