RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 MEGF6O75095 1541 aa18.8■□□□□ 0.6
SUPT16H-208ENST00000557652 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-208ENST00000557652 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
SUPT16H-208ENST00000557652 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
SUPT16H-208ENST00000557652 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
SUPT16H-208ENST00000557652 NEFMP07197 916 aa18.79■□□□□ 0.6
SUPT16H-208ENST00000557652 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
SUPT16H-208ENST00000557652 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
SUPT16H-208ENST00000557652 BCL9O00512 1426 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 A0A0G2JS52 829 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 MYT1Q01538 1121 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
SUPT16H-208ENST00000557652 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
SUPT16H-208ENST00000557652 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
SUPT16H-208ENST00000557652 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
SUPT16H-208ENST00000557652 RSPH6AQ9H0K4 717 aa18.76■□□□□ 0.59
SUPT16H-208ENST00000557652 AEBP1Q8IUX7 1158 aa18.75■□□□□ 0.59
SUPT16H-208ENST00000557652 HMOX1P09601 288 aa18.74■□□□□ 0.59
SUPT16H-208ENST00000557652 PNISRQ8TF01 805 aaKnown RBP18.74■□□□□ 0.59
SUPT16H-208ENST00000557652 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
SUPT16H-208ENST00000557652 SBF2Q86WG5 1849 aa18.73■□□□□ 0.59
SUPT16H-208ENST00000557652 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
SUPT16H-208ENST00000557652 GAS2L2Q8NHY3 880 aa18.73■□□□□ 0.59
SUPT16H-208ENST00000557652 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
SUPT16H-208ENST00000557652 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
SUPT16H-208ENST00000557652 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
SUPT16H-208ENST00000557652 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
SUPT16H-208ENST00000557652 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
SUPT16H-208ENST00000557652 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
SUPT16H-208ENST00000557652 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
SUPT16H-208ENST00000557652 C1orf141Q5JVX7 400 aa18.69■□□□□ 0.58
SUPT16H-208ENST00000557652 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
SUPT16H-208ENST00000557652 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
SUPT16H-208ENST00000557652 ADAMTS8Q9UP79 889 aa18.69■□□□□ 0.58
SUPT16H-208ENST00000557652 CCDC184Q52MB2 194 aa18.68■□□□□ 0.58
SUPT16H-208ENST00000557652 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
SUPT16H-208ENST00000557652 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
SUPT16H-208ENST00000557652 MARCH10Q8NA82 808 aaPredicted RBP18.68■□□□□ 0.58
SUPT16H-208ENST00000557652 ADAMTS7Q9UKP4 1686 aa18.68■□□□□ 0.58
SUPT16H-208ENST00000557652 CYP27B1O15528 508 aa18.67■□□□□ 0.58
SUPT16H-208ENST00000557652 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
SUPT16H-208ENST00000557652 PHKG2P15735 406 aa18.67■□□□□ 0.58
SUPT16H-208ENST00000557652 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
SUPT16H-208ENST00000557652 MIER1Q8N108 512 aa18.67■□□□□ 0.58
SUPT16H-208ENST00000557652 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
SUPT16H-208ENST00000557652 ITGB4P16144 1822 aa18.66■□□□□ 0.58
SUPT16H-208ENST00000557652 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
SUPT16H-208ENST00000557652 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
SUPT16H-208ENST00000557652 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
SUPT16H-208ENST00000557652 MTHFSDQ2M296 383 aaKnown RBP18.65■□□□□ 0.58
SUPT16H-208ENST00000557652 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
SUPT16H-208ENST00000557652 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
SUPT16H-208ENST00000557652 LMOD3Q0VAK6 560 aa18.64■□□□□ 0.57
SUPT16H-208ENST00000557652 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
SUPT16H-208ENST00000557652 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
SUPT16H-208ENST00000557652 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
SUPT16H-208ENST00000557652 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
SUPT16H-208ENST00000557652 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
SUPT16H-208ENST00000557652 RGPD3A6NKT7 1758 aaPredicted RBP18.61■□□□□ 0.57
SUPT16H-208ENST00000557652 RGPD4Q7Z3J3 1758 aa18.61■□□□□ 0.57
SUPT16H-208ENST00000557652 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
SUPT16H-208ENST00000557652 MRC1P22897 1456 aa18.6■□□□□ 0.57
SUPT16H-208ENST00000557652 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
SUPT16H-208ENST00000557652 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
SUPT16H-208ENST00000557652 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
SUPT16H-208ENST00000557652 SIPA1L3O60292 1781 aaPredicted RBP18.59■□□□□ 0.57
SUPT16H-208ENST00000557652 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
SUPT16H-208ENST00000557652 BTAF1O14981 1849 aa18.58■□□□□ 0.57
SUPT16H-208ENST00000557652 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.57
SUPT16H-208ENST00000557652 HMGB2P26583 209 aaKnown RBP18.58■□□□□ 0.56
SUPT16H-208ENST00000557652 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
SUPT16H-208ENST00000557652 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
SUPT16H-208ENST00000557652 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
SUPT16H-208ENST00000557652 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
SUPT16H-208ENST00000557652 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
SUPT16H-208ENST00000557652 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
SUPT16H-208ENST00000557652 RIPK4P57078 832 aa18.55■□□□□ 0.56
SUPT16H-208ENST00000557652 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
SUPT16H-208ENST00000557652 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
SUPT16H-208ENST00000557652 EP400Q96L91 3159 aa18.54■□□□□ 0.56
SUPT16H-208ENST00000557652 APAF1O14727 1248 aa18.54■□□□□ 0.56
SUPT16H-208ENST00000557652 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
SUPT16H-208ENST00000557652 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
SUPT16H-208ENST00000557652 CABP4P57796 275 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 TEFQ10587 303 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 SLC52A2Q9HAB3 445 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 BABAM1Q9NWV8 329 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 ZNF831Q5JPB2 1677 aa18.53■□□□□ 0.56
SUPT16H-208ENST00000557652 LY75O60449 1722 aa18.52■□□□□ 0.56
SUPT16H-208ENST00000557652 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
SUPT16H-208ENST00000557652 IL17REQ8NFR9 667 aa18.52■□□□□ 0.56
SUPT16H-208ENST00000557652 PLSCR1O15162 318 aa18.51■□□□□ 0.55
SUPT16H-208ENST00000557652 TRIM37O94972 964 aa18.51■□□□□ 0.55
SUPT16H-208ENST00000557652 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms