RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
RD3L-201ENST00000557640 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
RD3L-201ENST00000557640 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
RD3L-201ENST00000557640 Q6ZNB5 142 aa12.02□□□□□ -0.49
RD3L-201ENST00000557640 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
RD3L-201ENST00000557640 RREB1Q92766 1687 aa12.02□□□□□ -0.49
RD3L-201ENST00000557640 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
RD3L-201ENST00000557640 PPP1R15BQ5SWA1 713 aa12.01□□□□□ -0.49
RD3L-201ENST00000557640 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
RD3L-201ENST00000557640 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
RD3L-201ENST00000557640 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
RD3L-201ENST00000557640 CCDC125Q86Z20 511 aa12□□□□□ -0.49
RD3L-201ENST00000557640 ADAM33Q9BZ11 813 aa12□□□□□ -0.49
RD3L-201ENST00000557640 EVI5O60447 810 aa11.99□□□□□ -0.49
RD3L-201ENST00000557640 VPS72Q15906 364 aa11.99□□□□□ -0.49
RD3L-201ENST00000557640 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
RD3L-201ENST00000557640 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
RD3L-201ENST00000557640 ARHGEF28Q8N1W1 1705 aaKnown RBP11.98□□□□□ -0.49
RD3L-201ENST00000557640 ANKRD30BQ9BXX2 1392 aa11.98□□□□□ -0.49
RD3L-201ENST00000557640 KRT28Q7Z3Y7 464 aa11.98□□□□□ -0.49
RD3L-201ENST00000557640 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
RD3L-201ENST00000557640 SBNO1A3KN83 1393 aa11.97□□□□□ -0.49
RD3L-201ENST00000557640 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
RD3L-201ENST00000557640 ANKK1Q8NFD2 765 aa11.97□□□□□ -0.49
RD3L-201ENST00000557640 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
RD3L-201ENST00000557640 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
RD3L-201ENST00000557640 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
RD3L-201ENST00000557640 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
RD3L-201ENST00000557640 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
RD3L-201ENST00000557640 DISP2A7MBM2 1401 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 PRR36Q9H6K5 1346 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 FAM83GA6ND36 823 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
RD3L-201ENST00000557640 HRCP23327 699 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
RD3L-201ENST00000557640 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
RD3L-201ENST00000557640 PDE4AP27815 886 aa11.93□□□□□ -0.5
RD3L-201ENST00000557640 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
RD3L-201ENST00000557640 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
RD3L-201ENST00000557640 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
RD3L-201ENST00000557640 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
RD3L-201ENST00000557640 ATP7BP35670 1465 aa11.92□□□□□ -0.5
RD3L-201ENST00000557640 BCAMP50895 628 aa11.92□□□□□ -0.5
RD3L-201ENST00000557640 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
RD3L-201ENST00000557640 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
RD3L-201ENST00000557640 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
RD3L-201ENST00000557640 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
RD3L-201ENST00000557640 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
RD3L-201ENST00000557640 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
RD3L-201ENST00000557640 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
RD3L-201ENST00000557640 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
RD3L-201ENST00000557640 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
RD3L-201ENST00000557640 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
RD3L-201ENST00000557640 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
RD3L-201ENST00000557640 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
RD3L-201ENST00000557640 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
RD3L-201ENST00000557640 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
RD3L-201ENST00000557640 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
RD3L-201ENST00000557640 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
RD3L-201ENST00000557640 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
RD3L-201ENST00000557640 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
RD3L-201ENST00000557640 BTG4Q9NY30 223 aa11.89□□□□□ -0.51
RD3L-201ENST00000557640 PARP4Q9UKK3 1724 aaKnown RBP11.89□□□□□ -0.51
RD3L-201ENST00000557640 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
RD3L-201ENST00000557640 SBF2Q86WG5 1849 aa11.88□□□□□ -0.51
RD3L-201ENST00000557640 MYT1Q01538 1121 aa11.88□□□□□ -0.51
RD3L-201ENST00000557640 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
RD3L-201ENST00000557640 SIRT1Q96EB6 747 aa11.88□□□□□ -0.51
RD3L-201ENST00000557640 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
RD3L-201ENST00000557640 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
RD3L-201ENST00000557640 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
RD3L-201ENST00000557640 LRRC37A3O60309 1634 aa11.87□□□□□ -0.51
RD3L-201ENST00000557640 BAG6P46379 1132 aa11.87□□□□□ -0.51
RD3L-201ENST00000557640 KCNC4Q03721 635 aa11.87□□□□□ -0.51
RD3L-201ENST00000557640 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
RD3L-201ENST00000557640 SOWAHBA6NEL2 793 aa11.86□□□□□ -0.51
RD3L-201ENST00000557640 PSME1Q06323 249 aa11.86□□□□□ -0.51
RD3L-201ENST00000557640 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
RD3L-201ENST00000557640 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
RD3L-201ENST00000557640 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
RD3L-201ENST00000557640 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
RD3L-201ENST00000557640 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
RD3L-201ENST00000557640 COL9A1P20849 921 aa11.85□□□□□ -0.51
RD3L-201ENST00000557640 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
RD3L-201ENST00000557640 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
RD3L-201ENST00000557640 LAPTM4BQ86VI4 370 aa11.84□□□□□ -0.51
RD3L-201ENST00000557640 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
RD3L-201ENST00000557640 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
RD3L-201ENST00000557640 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
RD3L-201ENST00000557640 ZFRQ96KR1 1074 aaKnown RBP11.83□□□□□ -0.52
RD3L-201ENST00000557640 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
RD3L-201ENST00000557640 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
RD3L-201ENST00000557640 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
RD3L-201ENST00000557640 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
RD3L-201ENST00000557640 MYOM1P52179 1685 aa11.82□□□□□ -0.52
RD3L-201ENST00000557640 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
RD3L-201ENST00000557640 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
RD3L-201ENST00000557640 UTRNP46939 3433 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms