RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
SLIRP-211ENST00000557623 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
SLIRP-211ENST00000557623 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
SLIRP-211ENST00000557623 EXOC5O00471 708 aa17.04■□□□□ 0.32
SLIRP-211ENST00000557623 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
SLIRP-211ENST00000557623 IL2RBP14784 551 aa17.04■□□□□ 0.32
SLIRP-211ENST00000557623 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
SLIRP-211ENST00000557623 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
SLIRP-211ENST00000557623 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
SLIRP-211ENST00000557623 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
SLIRP-211ENST00000557623 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
SLIRP-211ENST00000557623 TNS1Q9HBL0 1735 aaKnown RBP17.02■□□□□ 0.32
SLIRP-211ENST00000557623 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.32
SLIRP-211ENST00000557623 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
SLIRP-211ENST00000557623 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.31
SLIRP-211ENST00000557623 TNS2Q63HR2 1409 aa17.02■□□□□ 0.31
SLIRP-211ENST00000557623 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
SLIRP-211ENST00000557623 EP400Q96L91 3159 aa17■□□□□ 0.31
SLIRP-211ENST00000557623 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
SLIRP-211ENST00000557623 NBPF4Q96M43 638 aa17■□□□□ 0.31
SLIRP-211ENST00000557623 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
SLIRP-211ENST00000557623 BAG6P46379 1132 aa16.98■□□□□ 0.31
SLIRP-211ENST00000557623 BCL9O00512 1426 aa16.97■□□□□ 0.31
SLIRP-211ENST00000557623 TRIM37O94972 964 aa16.97■□□□□ 0.31
SLIRP-211ENST00000557623 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
SLIRP-211ENST00000557623 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.31
SLIRP-211ENST00000557623 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
SLIRP-211ENST00000557623 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
SLIRP-211ENST00000557623 USHBP1Q8N6Y0 703 aa16.95■□□□□ 0.3
SLIRP-211ENST00000557623 MEGF6O75095 1541 aa16.95■□□□□ 0.3
SLIRP-211ENST00000557623 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
SLIRP-211ENST00000557623 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
SLIRP-211ENST00000557623 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
SLIRP-211ENST00000557623 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
SLIRP-211ENST00000557623 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
SLIRP-211ENST00000557623 EYA1Q99502 592 aa16.93■□□□□ 0.3
SLIRP-211ENST00000557623 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
SLIRP-211ENST00000557623 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
SLIRP-211ENST00000557623 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
SLIRP-211ENST00000557623 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
SLIRP-211ENST00000557623 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
SLIRP-211ENST00000557623 APBA3O96018 575 aa16.91■□□□□ 0.3
SLIRP-211ENST00000557623 MTHFSP49914 203 aa16.91■□□□□ 0.3
SLIRP-211ENST00000557623 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
SLIRP-211ENST00000557623 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
SLIRP-211ENST00000557623 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
SLIRP-211ENST00000557623 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
SLIRP-211ENST00000557623 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
SLIRP-211ENST00000557623 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.3
SLIRP-211ENST00000557623 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
SLIRP-211ENST00000557623 RREB1Q92766 1687 aa16.88■□□□□ 0.29
SLIRP-211ENST00000557623 DOT1LQ8TEK3 1739 aa16.88■□□□□ 0.29
SLIRP-211ENST00000557623 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
SLIRP-211ENST00000557623 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
SLIRP-211ENST00000557623 BTAF1O14981 1849 aa16.87■□□□□ 0.29
SLIRP-211ENST00000557623 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
SLIRP-211ENST00000557623 PLSCR1O15162 318 aa16.86■□□□□ 0.29
SLIRP-211ENST00000557623 IL13P35225 146 aa16.86■□□□□ 0.29
SLIRP-211ENST00000557623 CAMKK2Q96RR4 588 aa16.86■□□□□ 0.29
SLIRP-211ENST00000557623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.29
SLIRP-211ENST00000557623 DIAPH1O60610 1272 aaKnown RBP16.85■□□□□ 0.29
SLIRP-211ENST00000557623 FKBP8Q14318 412 aa16.85■□□□□ 0.29
SLIRP-211ENST00000557623 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
SLIRP-211ENST00000557623 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
SLIRP-211ENST00000557623 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
SLIRP-211ENST00000557623 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
SLIRP-211ENST00000557623 KCNQ2O43526 872 aa16.83■□□□□ 0.28
SLIRP-211ENST00000557623 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
SLIRP-211ENST00000557623 ITGB4P16144 1822 aa16.82■□□□□ 0.28
SLIRP-211ENST00000557623 KDRP35968 1356 aa16.82■□□□□ 0.28
SLIRP-211ENST00000557623 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
SLIRP-211ENST00000557623 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
SLIRP-211ENST00000557623 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
SLIRP-211ENST00000557623 CYP27B1O15528 508 aa16.81■□□□□ 0.28
SLIRP-211ENST00000557623 PPP2R1AP30153 589 aa16.81■□□□□ 0.28
SLIRP-211ENST00000557623 AMOTQ4VCS5 1084 aa16.81■□□□□ 0.28
SLIRP-211ENST00000557623 PLEKHO1Q53GL0 409 aaPredicted RBP16.81■□□□□ 0.28
SLIRP-211ENST00000557623 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
SLIRP-211ENST00000557623 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
SLIRP-211ENST00000557623 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
SLIRP-211ENST00000557623 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
SLIRP-211ENST00000557623 NKX1-1Q15270 411 aaPredicted RBP16.79■□□□□ 0.28
SLIRP-211ENST00000557623 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
SLIRP-211ENST00000557623 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
SLIRP-211ENST00000557623 SPDYE1Q8NFV5 336 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-211ENST00000557623 LY75O60449 1722 aa16.78■□□□□ 0.28
SLIRP-211ENST00000557623 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
SLIRP-211ENST00000557623 PHKG2P15735 406 aa16.77■□□□□ 0.28
SLIRP-211ENST00000557623 RALBP1Q15311 655 aa16.77■□□□□ 0.28
SLIRP-211ENST00000557623 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
SLIRP-211ENST00000557623 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.27
SLIRP-211ENST00000557623 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
SLIRP-211ENST00000557623 HMOX1P09601 288 aa16.76■□□□□ 0.27
SLIRP-211ENST00000557623 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
SLIRP-211ENST00000557623 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
SLIRP-211ENST00000557623 ZNF530Q6P9A1 599 aaPredicted RBP16.75■□□□□ 0.27
SLIRP-211ENST00000557623 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
SLIRP-211ENST00000557623 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
SLIRP-211ENST00000557623 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
SLIRP-211ENST00000557623 PROM2Q8N271 834 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms