RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 TNNT2P45379 298 aaPredicted RBP28.83■■■□□ 2.21
FOXA1-205ENST00000557418 RGPD3A6NKT7 1758 aaPredicted RBP28.83■■■□□ 2.21
FOXA1-205ENST00000557418 RGPD4Q7Z3J3 1758 aa28.83■■■□□ 2.21
FOXA1-205ENST00000557418 TATP17735 454 aaPredicted RBP28.82■■■□□ 2.2
FOXA1-205ENST00000557418 TXNRD1Q16881 649 aa28.82■■■□□ 2.2
FOXA1-205ENST00000557418 POLKQ9UBT6 870 aa28.82■■■□□ 2.2
FOXA1-205ENST00000557418 KNSTRNQ9Y448 316 aa28.79■■■□□ 2.2
FOXA1-205ENST00000557418 NHSQ6T4R5 1651 aa28.79■■■□□ 2.2
FOXA1-205ENST00000557418 MEGF6O75095 1541 aa28.79■■■□□ 2.2
FOXA1-205ENST00000557418 LRP5O75197 1615 aa28.76■■■□□ 2.19
FOXA1-205ENST00000557418 PRIM1P49642 420 aaKnown RBP28.75■■■□□ 2.19
FOXA1-205ENST00000557418 MORC1Q86VD1 984 aa28.75■■■□□ 2.19
FOXA1-205ENST00000557418 SYTL4Q96C24 671 aaPredicted RBP28.75■■■□□ 2.19
FOXA1-205ENST00000557418 ANKRD26Q9UPS8 1709 aa28.74■■■□□ 2.19
FOXA1-205ENST00000557418 NSD2O96028 1365 aa28.74■■■□□ 2.19
FOXA1-205ENST00000557418 DDX10Q13206 875 aaKnown RBP28.73■■■□□ 2.19
FOXA1-205ENST00000557418 ANO8Q9HCE9 1232 aaPredicted RBP28.73■■■□□ 2.19
FOXA1-205ENST00000557418 STK32BQ9NY57 414 aa28.73■■■□□ 2.19
FOXA1-205ENST00000557418 BTAF1O14981 1849 aa28.72■■■□□ 2.19
FOXA1-205ENST00000557418 EYA1Q99502 592 aa28.72■■■□□ 2.19
FOXA1-205ENST00000557418 PER1O15534 1290 aaPredicted RBP28.69■■■□□ 2.18
FOXA1-205ENST00000557418 SHANK3Q9BYB0 1731 aa28.69■■■□□ 2.18
FOXA1-205ENST00000557418 EIF4A2Q14240 407 aaKnown RBP28.68■■■□□ 2.18
FOXA1-205ENST00000557418 SLC15A2Q16348 729 aa28.68■■■□□ 2.18
FOXA1-205ENST00000557418 PCDH11XQ9BZA7 1347 aa28.68■■■□□ 2.18
FOXA1-205ENST00000557418 PCDH11YQ9BZA8 1340 aa28.68■■■□□ 2.18
FOXA1-205ENST00000557418 SPON1Q9HCB6 807 aa28.67■■■□□ 2.18
FOXA1-205ENST00000557418 SPG7Q9UQ90 795 aa28.66■■■□□ 2.18
FOXA1-205ENST00000557418 CYP27B1O15528 508 aa28.64■■■□□ 2.18
FOXA1-205ENST00000557418 AMER1Q5JTC6 1135 aaPredicted RBP28.64■■■□□ 2.18
FOXA1-205ENST00000557418 SLC27A3Q5K4L6 730 aa28.64■■■□□ 2.18
FOXA1-205ENST00000557418 LRRC4BQ9NT99 713 aa28.63■■■□□ 2.17
FOXA1-205ENST00000557418 DOT1LQ8TEK3 1739 aa28.63■■■□□ 2.17
FOXA1-205ENST00000557418 NCAPD2Q15021 1401 aa28.62■■■□□ 2.17
FOXA1-205ENST00000557418 PDGFDQ9GZP0 370 aaPredicted RBP28.61■■■□□ 2.17
FOXA1-205ENST00000557418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.61■■■□□ 2.17
FOXA1-205ENST00000557418 PPP1R1BQ9UD71 204 aaPredicted RBP28.59■■■□□ 2.17
FOXA1-205ENST00000557418 MPRIPQ6WCQ1 1025 aa28.57■■■□□ 2.16
FOXA1-205ENST00000557418 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
FOXA1-205ENST00000557418 NKX1-1Q15270 411 aaPredicted RBP28.56■■■□□ 2.16
FOXA1-205ENST00000557418 NPC1L1Q9UHC9 1359 aa28.55■■■□□ 2.16
FOXA1-205ENST00000557418 IGSF1Q8N6C5 1336 aa28.55■■■□□ 2.16
FOXA1-205ENST00000557418 KCNQ4P56696 695 aa28.55■■■□□ 2.16
FOXA1-205ENST00000557418 IFNL2Q8IZJ0 200 aa28.55■■■□□ 2.16
FOXA1-205ENST00000557418 PKD1L3Q7Z443 1732 aa28.55■■■□□ 2.16
FOXA1-205ENST00000557418 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
FOXA1-205ENST00000557418 CCNL1Q9UK58 526 aaPredicted RBP28.54■■■□□ 2.16
FOXA1-205ENST00000557418 ATF5Q9Y2D1 282 aaPredicted RBP28.54■■■□□ 2.16
FOXA1-205ENST00000557418 ZNF827Q17R98 1081 aa28.53■■■□□ 2.16
FOXA1-205ENST00000557418 CASZ1Q86V15 1759 aa28.52■■■□□ 2.16
FOXA1-205ENST00000557418 AKT1S1Q96B36 256 aa28.52■■■□□ 2.16
FOXA1-205ENST00000557418 PHKG2P15735 406 aa28.51■■■□□ 2.15
FOXA1-205ENST00000557418 MTHFSP49914 203 aa28.5■■■□□ 2.15
FOXA1-205ENST00000557418 PLEKHO1Q53GL0 409 aaPredicted RBP28.5■■■□□ 2.15
FOXA1-205ENST00000557418 MTFR1LQ9H019 292 aa28.5■■■□□ 2.15
FOXA1-205ENST00000557418 LY75O60449 1722 aa28.49■■■□□ 2.15
FOXA1-205ENST00000557418 CNGB1Q14028 1251 aaPredicted RBP28.49■■■□□ 2.15
FOXA1-205ENST00000557418 SMARCC1Q92922 1105 aaPredicted RBP28.49■■■□□ 2.15
FOXA1-205ENST00000557418 TFCP2L1Q9NZI6 479 aa28.49■■■□□ 2.15
FOXA1-205ENST00000557418 PAPPAQ13219 1627 aa28.49■■■□□ 2.15
FOXA1-205ENST00000557418 HMGB2P26583 209 aaKnown RBP28.48■■■□□ 2.15
FOXA1-205ENST00000557418 IL13P35225 146 aa28.48■■■□□ 2.15
FOXA1-205ENST00000557418 PIGBQ92521 554 aa28.48■■■□□ 2.15
FOXA1-205ENST00000557418 ITGB4P16144 1822 aa28.48■■■□□ 2.15
FOXA1-205ENST00000557418 SULT6B1Q6IMI4 303 aa28.47■■■□□ 2.15
FOXA1-205ENST00000557418 PLEKHG2Q9H7P9 1386 aa28.47■■■□□ 2.15
FOXA1-205ENST00000557418 AMOTQ4VCS5 1084 aa28.46■■■□□ 2.15
FOXA1-205ENST00000557418 PTGER2P43116 358 aa28.45■■■□□ 2.14
FOXA1-205ENST00000557418 AEBP1Q8IUX7 1158 aa28.45■■■□□ 2.14
FOXA1-205ENST00000557418 TMOD3Q9NYL9 352 aa28.45■■■□□ 2.14
FOXA1-205ENST00000557418 PALLDQ8WX93 1383 aa28.44■■■□□ 2.14
FOXA1-205ENST00000557418 HSP90AB1P08238 724 aaKnown RBP28.43■■■□□ 2.14
FOXA1-205ENST00000557418 TOGARAM1Q9Y4F4 1720 aa28.43■■■□□ 2.14
FOXA1-205ENST00000557418 ZNF530Q6P9A1 599 aaPredicted RBP28.42■■■□□ 2.14
FOXA1-205ENST00000557418 SLC16A10Q8TF71 515 aa28.42■■■□□ 2.14
FOXA1-205ENST00000557418 PNPLA7Q6ZV29 1317 aa28.41■■■□□ 2.14
FOXA1-205ENST00000557418 DIAPH1O60610 1272 aaKnown RBP28.39■■■□□ 2.14
FOXA1-205ENST00000557418 C1orf141Q5JVX7 400 aa28.39■■■□□ 2.14
FOXA1-205ENST00000557418 DCAF5Q96JK2 942 aa28.39■■■□□ 2.14
FOXA1-205ENST00000557418 ERVV-2B6SEH9 535 aa28.38■■■□□ 2.13
FOXA1-205ENST00000557418 MSH5O43196 834 aa28.37■■■□□ 2.13
FOXA1-205ENST00000557418 SGIP1Q9BQI5 828 aa28.37■■■□□ 2.13
FOXA1-205ENST00000557418 ASAP1Q9ULH1 1129 aa28.37■■■□□ 2.13
FOXA1-205ENST00000557418 KDRP35968 1356 aa28.37■■■□□ 2.13
FOXA1-205ENST00000557418 QSER1Q2KHR3 1735 aa28.36■■■□□ 2.13
FOXA1-205ENST00000557418 DCAF8L1A6NGE4 600 aa28.35■■■□□ 2.13
FOXA1-205ENST00000557418 ARXQ96QS3 562 aa28.35■■■□□ 2.13
FOXA1-205ENST00000557418 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
FOXA1-205ENST00000557418 HMOX1P09601 288 aa28.34■■■□□ 2.13
FOXA1-205ENST00000557418 SIK1P57059 783 aa28.34■■■□□ 2.13
FOXA1-205ENST00000557418 DIEXFQ68CQ4 756 aaKnown RBP28.34■■■□□ 2.13
FOXA1-205ENST00000557418 ATG3Q9NT62 314 aa28.34■■■□□ 2.13
FOXA1-205ENST00000557418 CABP4P57796 275 aa28.33■■■□□ 2.13
FOXA1-205ENST00000557418 COL23A1Q86Y22 540 aaPredicted RBP28.33■■■□□ 2.13
FOXA1-205ENST00000557418 PRKRIP1Q9H875 184 aaPredicted RBP28.33■■■□□ 2.13
FOXA1-205ENST00000557418 POLD1P28340 1107 aa28.32■■■□□ 2.12
FOXA1-205ENST00000557418 FLAD1Q8NFF5 587 aa28.32■■■□□ 2.12
FOXA1-205ENST00000557418 TUBGCP6Q96RT7 1819 aa28.32■■■□□ 2.12
FOXA1-205ENST00000557418 C5P01031 1676 aa28.31■■■□□ 2.12
FOXA1-205ENST00000557418 TAF1LQ8IZX4 1826 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms