RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
ATXN3-247ENST00000557311 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-247ENST00000557311 RXRBP28702 533 aa7.65□□□□□ -1.18
ATXN3-247ENST00000557311 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-247ENST00000557311 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
ATXN3-247ENST00000557311 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-247ENST00000557311 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
ATXN3-247ENST00000557311 SYNMO15061 1565 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 MSH6P52701 1360 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 SPATA31A6Q5VVP1 1343 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 IDI1Q13907 227 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 BEGAINQ9BUH8 593 aa7.64□□□□□ -1.19
ATXN3-247ENST00000557311 ABCC3O15438 1527 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 SLIT1O75093 1534 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 ARHGAP31Q2M1Z3 1444 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 POTECB2RU33 542 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 ZNF598Q86UK7 904 aaKnown RBP7.63□□□□□ -1.19
ATXN3-247ENST00000557311 ANKLE1Q8NAG6 615 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 ZNF775Q96BV0 537 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-247ENST00000557311 TIAM1Q13009 1591 aa7.63□□□□□ -1.19
ATXN3-247ENST00000557311 USP46P62068 366 aa7.62□□□□□ -1.19
ATXN3-247ENST00000557311 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
ATXN3-247ENST00000557311 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
ATXN3-247ENST00000557311 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
ATXN3-247ENST00000557311 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
ATXN3-247ENST00000557311 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 GDF9O60383 454 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 MORN1Q5T089 497 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 SLC27A5Q9Y2P5 690 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 EHBP1L1Q8N3D4 1523 aa7.61□□□□□ -1.19
ATXN3-247ENST00000557311 FMNL1O95466 1100 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-247ENST00000557311 ADH1BP00325 375 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 NEUROD2Q15784 382 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 ZNF697Q5TEC3 545 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 SPSB2Q99619 263 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-247ENST00000557311 RRP7BPQ9NSQ0 103 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
ATXN3-247ENST00000557311 KANK1Q14678 1352 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRDM15P57071 1507 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-247ENST00000557311 TNFRSF10AO00220 468 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 MS4A1P11836 297 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-247ENST00000557311 ATF3P18847 181 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRR20EP86478 221 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRR20CP86479 221 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRR20DP86480 221 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRR20BP86481 221 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 PRR20AP86496 221 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 Q3C1V9 767 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 HLA-CQ95604 372 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
ATXN3-247ENST00000557311 ARHGEF5Q12774 1597 aa7.59□□□□□ -1.2
ATXN3-247ENST00000557311 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
ATXN3-247ENST00000557311 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-247ENST00000557311 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-247ENST00000557311 HOXA2O43364 376 aa7.58□□□□□ -1.2
ATXN3-247ENST00000557311 DGAT1O75907 488 aa7.58□□□□□ -1.2
ATXN3-247ENST00000557311 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
ATXN3-247ENST00000557311 PKDCCQ504Y2 493 aa7.58□□□□□ -1.2
ATXN3-247ENST00000557311 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-247ENST00000557311 SLC6A16Q9GZN6 736 aa7.58□□□□□ -1.2
ATXN3-247ENST00000557311 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
ATXN3-247ENST00000557311 C6orf229H3BNL8 230 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-247ENST00000557311 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
ATXN3-247ENST00000557311 DIXDC1Q155Q3 683 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 SPIRE2Q8WWL2 714 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 TBC1D2Q9BYX2 928 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 KDM4CQ9H3R0 1056 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
ATXN3-247ENST00000557311 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
ATXN3-247ENST00000557311 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 FDX1P10109 184 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 NDUFV2P19404 249 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 CSPP1Q1MSJ5 1256 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-247ENST00000557311 TET3O43151 1660 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
ATXN3-247ENST00000557311 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-247ENST00000557311 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-247ENST00000557311 NUTM2DQ5VT03 806 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-247ENST00000557311 RNF19BQ6ZMZ0 732 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-247ENST00000557311 PKD2L1Q9P0L9 805 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 EFCAB6Q5THR3 1501 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-247ENST00000557311 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms