RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SYTL4Q96C24 671 aaPredicted RBP17.97■□□□□ 0.47
PSEN1-221ENST00000557293 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
PSEN1-221ENST00000557293 CCNL1Q9UK58 526 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-221ENST00000557293 FBLN1P23142 703 aa17.95■□□□□ 0.46
PSEN1-221ENST00000557293 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
PSEN1-221ENST00000557293 MSL1Q68DK7 614 aa17.94■□□□□ 0.46
PSEN1-221ENST00000557293 TMC1Q8TDI8 760 aa17.94■□□□□ 0.46
PSEN1-221ENST00000557293 EDC4Q6P2E9 1401 aaKnown RBP17.94■□□□□ 0.46
PSEN1-221ENST00000557293 HDGFL2Q7Z4V5 671 aaPredicted RBP17.93■□□□□ 0.46
PSEN1-221ENST00000557293 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
PSEN1-221ENST00000557293 ADCY9O60503 1353 aa17.92■□□□□ 0.46
PSEN1-221ENST00000557293 MSH5O43196 834 aa17.92■□□□□ 0.46
PSEN1-221ENST00000557293 HSPA6P17066 643 aa17.92■□□□□ 0.46
PSEN1-221ENST00000557293 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
PSEN1-221ENST00000557293 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
PSEN1-221ENST00000557293 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
PSEN1-221ENST00000557293 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
PSEN1-221ENST00000557293 HOXC9P31274 260 aa17.91■□□□□ 0.46
PSEN1-221ENST00000557293 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
PSEN1-221ENST00000557293 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
PSEN1-221ENST00000557293 MEGF6O75095 1541 aa17.9■□□□□ 0.46
PSEN1-221ENST00000557293 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
PSEN1-221ENST00000557293 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
PSEN1-221ENST00000557293 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
PSEN1-221ENST00000557293 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.45
PSEN1-221ENST00000557293 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
PSEN1-221ENST00000557293 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
PSEN1-221ENST00000557293 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
PSEN1-221ENST00000557293 USP47Q96K76 1375 aa17.88■□□□□ 0.45
PSEN1-221ENST00000557293 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
PSEN1-221ENST00000557293 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
PSEN1-221ENST00000557293 KIF3CO14782 793 aa17.85■□□□□ 0.45
PSEN1-221ENST00000557293 AMPHP49418 695 aa17.85■□□□□ 0.45
PSEN1-221ENST00000557293 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
PSEN1-221ENST00000557293 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
PSEN1-221ENST00000557293 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
PSEN1-221ENST00000557293 COG3Q96JB2 828 aa17.83■□□□□ 0.44
PSEN1-221ENST00000557293 C5P01031 1676 aa17.81■□□□□ 0.44
PSEN1-221ENST00000557293 CGNL1Q0VF96 1302 aa17.81■□□□□ 0.44
PSEN1-221ENST00000557293 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
PSEN1-221ENST00000557293 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
PSEN1-221ENST00000557293 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
PSEN1-221ENST00000557293 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
PSEN1-221ENST00000557293 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
PSEN1-221ENST00000557293 CYP27B1O15528 508 aa17.8■□□□□ 0.44
PSEN1-221ENST00000557293 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
PSEN1-221ENST00000557293 TESK2Q96S53 571 aa17.8■□□□□ 0.44
PSEN1-221ENST00000557293 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
PSEN1-221ENST00000557293 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
PSEN1-221ENST00000557293 FYB1O15117 783 aa17.78■□□□□ 0.44
PSEN1-221ENST00000557293 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
PSEN1-221ENST00000557293 TATP17735 454 aaPredicted RBP17.77■□□□□ 0.44
PSEN1-221ENST00000557293 RTL1A6NKG5 1358 aa17.77■□□□□ 0.43
PSEN1-221ENST00000557293 C4BP0C0L5 1744 aa17.76■□□□□ 0.43
PSEN1-221ENST00000557293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
PSEN1-221ENST00000557293 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
PSEN1-221ENST00000557293 PIGBQ92521 554 aa17.76■□□□□ 0.43
PSEN1-221ENST00000557293 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
PSEN1-221ENST00000557293 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
PSEN1-221ENST00000557293 AK7Q96M32 723 aa17.75■□□□□ 0.43
PSEN1-221ENST00000557293 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
PSEN1-221ENST00000557293 UBR3Q6ZT12 1888 aa17.75■□□□□ 0.43
PSEN1-221ENST00000557293 PCDH11XQ9BZA7 1347 aa17.74■□□□□ 0.43
PSEN1-221ENST00000557293 PCDH11YQ9BZA8 1340 aa17.74■□□□□ 0.43
PSEN1-221ENST00000557293 PHF14O94880 888 aa17.74■□□□□ 0.43
PSEN1-221ENST00000557293 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
PSEN1-221ENST00000557293 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
PSEN1-221ENST00000557293 INSRP06213 1382 aa17.73■□□□□ 0.43
PSEN1-221ENST00000557293 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
PSEN1-221ENST00000557293 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
PSEN1-221ENST00000557293 SSFA2P28290 1259 aa17.72■□□□□ 0.43
PSEN1-221ENST00000557293 APLP1P51693 650 aa17.72■□□□□ 0.43
PSEN1-221ENST00000557293 ITGB4P16144 1822 aa17.72■□□□□ 0.43
PSEN1-221ENST00000557293 ITPK1Q13572 414 aa17.71■□□□□ 0.43
PSEN1-221ENST00000557293 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
PSEN1-221ENST00000557293 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
PSEN1-221ENST00000557293 TOMM70O94826 608 aa17.7■□□□□ 0.42
PSEN1-221ENST00000557293 SIK1P57059 783 aa17.7■□□□□ 0.42
PSEN1-221ENST00000557293 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
PSEN1-221ENST00000557293 NMRK2Q9NPI5 230 aa17.68■□□□□ 0.42
PSEN1-221ENST00000557293 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
PSEN1-221ENST00000557293 PXDNLA1KZ92 1463 aa17.68■□□□□ 0.42
PSEN1-221ENST00000557293 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
PSEN1-221ENST00000557293 MMP10P09238 476 aa17.67■□□□□ 0.42
PSEN1-221ENST00000557293 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
PSEN1-221ENST00000557293 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
PSEN1-221ENST00000557293 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
PSEN1-221ENST00000557293 GNPATO15228 680 aa17.66■□□□□ 0.42
PSEN1-221ENST00000557293 TGFB2P61812 414 aa17.66■□□□□ 0.42
PSEN1-221ENST00000557293 FLT4P35916 1363 aa17.66■□□□□ 0.42
PSEN1-221ENST00000557293 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
PSEN1-221ENST00000557293 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
PSEN1-221ENST00000557293 PKD1L3Q7Z443 1732 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 KIF13BQ9NQT8 1826 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 BCS1LQ9Y276 419 aa17.64■□□□□ 0.41
PSEN1-221ENST00000557293 DPEP1P16444 411 aa17.63■□□□□ 0.41
PSEN1-221ENST00000557293 KCNA3P22001 575 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms