RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
VRTN-202ENST00000557177 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
VRTN-202ENST00000557177 SYT17Q9BSW7 474 aa20.23■□□□□ 0.83
VRTN-202ENST00000557177 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
VRTN-202ENST00000557177 RRS1Q15050 365 aaKnown RBP20.22■□□□□ 0.83
VRTN-202ENST00000557177 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
VRTN-202ENST00000557177 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
VRTN-202ENST00000557177 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
VRTN-202ENST00000557177 PRIM1P49642 420 aaKnown RBP20.2■□□□□ 0.82
VRTN-202ENST00000557177 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
VRTN-202ENST00000557177 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
VRTN-202ENST00000557177 ARXQ96QS3 562 aa20.2■□□□□ 0.82
VRTN-202ENST00000557177 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
VRTN-202ENST00000557177 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
VRTN-202ENST00000557177 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
VRTN-202ENST00000557177 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
VRTN-202ENST00000557177 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
VRTN-202ENST00000557177 PNPLA7Q6ZV29 1317 aa20.17■□□□□ 0.82
VRTN-202ENST00000557177 INSRP06213 1382 aa20.17■□□□□ 0.82
VRTN-202ENST00000557177 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
VRTN-202ENST00000557177 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
VRTN-202ENST00000557177 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
VRTN-202ENST00000557177 SLC16A10Q8TF71 515 aa20.16■□□□□ 0.82
VRTN-202ENST00000557177 FLT4P35916 1363 aa20.16■□□□□ 0.82
VRTN-202ENST00000557177 KCNQ4P56696 695 aa20.15■□□□□ 0.82
VRTN-202ENST00000557177 CHD4Q14839 1912 aa20.14■□□□□ 0.81
VRTN-202ENST00000557177 HSP90AB2PQ58FF8 381 aa20.14■□□□□ 0.81
VRTN-202ENST00000557177 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
VRTN-202ENST00000557177 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
VRTN-202ENST00000557177 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
VRTN-202ENST00000557177 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
VRTN-202ENST00000557177 NSD3Q9BZ95 1437 aa20.11■□□□□ 0.81
VRTN-202ENST00000557177 PKD1L3Q7Z443 1732 aa20.11■□□□□ 0.81
VRTN-202ENST00000557177 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
VRTN-202ENST00000557177 CCNL1Q9UK58 526 aaPredicted RBP20.11■□□□□ 0.81
VRTN-202ENST00000557177 NCAPD2Q15021 1401 aa20.1■□□□□ 0.81
VRTN-202ENST00000557177 C5P01031 1676 aa20.1■□□□□ 0.81
VRTN-202ENST00000557177 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
VRTN-202ENST00000557177 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
VRTN-202ENST00000557177 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
VRTN-202ENST00000557177 POLD1P28340 1107 aa20.09■□□□□ 0.81
VRTN-202ENST00000557177 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.81
VRTN-202ENST00000557177 TIMELESSQ9UNS1 1208 aa20.08■□□□□ 0.81
VRTN-202ENST00000557177 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.81
VRTN-202ENST00000557177 TAF1LQ8IZX4 1826 aa20.08■□□□□ 0.8
VRTN-202ENST00000557177 ITGB4P16144 1822 aa20.07■□□□□ 0.8
VRTN-202ENST00000557177 CYP27B1O15528 508 aa20.06■□□□□ 0.8
VRTN-202ENST00000557177 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
VRTN-202ENST00000557177 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
VRTN-202ENST00000557177 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
VRTN-202ENST00000557177 GPR162Q16538 588 aa20.02■□□□□ 0.8
VRTN-202ENST00000557177 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
VRTN-202ENST00000557177 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.79
VRTN-202ENST00000557177 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.79
VRTN-202ENST00000557177 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
VRTN-202ENST00000557177 NLGN2Q8NFZ4 835 aa20.01■□□□□ 0.79
VRTN-202ENST00000557177 C4BP0C0L5 1744 aa20.01■□□□□ 0.79
VRTN-202ENST00000557177 NKX1-1Q15270 411 aaPredicted RBP20■□□□□ 0.79
VRTN-202ENST00000557177 MSH5O43196 834 aa19.99■□□□□ 0.79
VRTN-202ENST00000557177 HMGB2P26583 209 aaKnown RBP19.99■□□□□ 0.79
VRTN-202ENST00000557177 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
VRTN-202ENST00000557177 EYA1Q99502 592 aa19.98■□□□□ 0.79
VRTN-202ENST00000557177 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
VRTN-202ENST00000557177 UBR3Q6ZT12 1888 aa19.98■□□□□ 0.79
VRTN-202ENST00000557177 PIGBQ92521 554 aa19.97■□□□□ 0.79
VRTN-202ENST00000557177 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
VRTN-202ENST00000557177 SPG7Q9UQ90 795 aa19.97■□□□□ 0.79
VRTN-202ENST00000557177 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
VRTN-202ENST00000557177 FLAD1Q8NFF5 587 aa19.96■□□□□ 0.79
VRTN-202ENST00000557177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.96■□□□□ 0.79
VRTN-202ENST00000557177 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
VRTN-202ENST00000557177 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
VRTN-202ENST00000557177 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
VRTN-202ENST00000557177 YBX3P16989 372 aaKnown RBP eCLIP19.93■□□□□ 0.78
VRTN-202ENST00000557177 AK7Q96M32 723 aa19.92■□□□□ 0.78
VRTN-202ENST00000557177 PHKG2P15735 406 aa19.91■□□□□ 0.78
VRTN-202ENST00000557177 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
VRTN-202ENST00000557177 CD2APQ9Y5K6 639 aa19.91■□□□□ 0.78
VRTN-202ENST00000557177 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
VRTN-202ENST00000557177 SIK1P57059 783 aa19.9■□□□□ 0.78
VRTN-202ENST00000557177 IFNL2Q8IZJ0 200 aa19.9■□□□□ 0.78
VRTN-202ENST00000557177 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
VRTN-202ENST00000557177 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
VRTN-202ENST00000557177 LINC00116Q8NCU8 138 aa19.89■□□□□ 0.77
VRTN-202ENST00000557177 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
VRTN-202ENST00000557177 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.77
VRTN-202ENST00000557177 ASAP1Q9ULH1 1129 aa19.89■□□□□ 0.77
VRTN-202ENST00000557177 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
VRTN-202ENST00000557177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.88■□□□□ 0.77
VRTN-202ENST00000557177 SSFA2P28290 1259 aa19.88■□□□□ 0.77
VRTN-202ENST00000557177 TNNT2P45379 298 aaPredicted RBP19.88■□□□□ 0.77
VRTN-202ENST00000557177 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
VRTN-202ENST00000557177 PHF14O94880 888 aa19.87■□□□□ 0.77
VRTN-202ENST00000557177 EIF4G2P78344 907 aaKnown RBP eCLIP19.87■□□□□ 0.77
VRTN-202ENST00000557177 SMIM5Q71RC9 77 aa19.87■□□□□ 0.77
VRTN-202ENST00000557177 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
VRTN-202ENST00000557177 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
VRTN-202ENST00000557177 ITPK1Q13572 414 aa19.86■□□□□ 0.77
VRTN-202ENST00000557177 KDRP35968 1356 aa19.85■□□□□ 0.77
VRTN-202ENST00000557177 PANK3Q9H999 370 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms