RNA–Protein interactions for RNA: ENST00000557065.1

COCH-211, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-211ENST00000557065 SYT17Q9BSW7 474 aa11.35□□□□□ -0.59
COCH-211ENST00000557065 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
COCH-211ENST00000557065 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
COCH-211ENST00000557065 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
COCH-211ENST00000557065 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
COCH-211ENST00000557065 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
COCH-211ENST00000557065 ARXQ96QS3 562 aa11.34□□□□□ -0.59
COCH-211ENST00000557065 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
COCH-211ENST00000557065 USP54Q70EL1 1684 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 TATP17735 454 aaPredicted RBP11.33□□□□□ -0.6
COCH-211ENST00000557065 HMGB2P26583 209 aaKnown RBP11.33□□□□□ -0.6
COCH-211ENST00000557065 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 USHBP1Q8N6Y0 703 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
COCH-211ENST00000557065 POLD1P28340 1107 aa11.32□□□□□ -0.6
COCH-211ENST00000557065 KCNQ4P56696 695 aa11.32□□□□□ -0.6
COCH-211ENST00000557065 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
COCH-211ENST00000557065 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
COCH-211ENST00000557065 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
COCH-211ENST00000557065 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
COCH-211ENST00000557065 PCGF6Q9BYE7 350 aa11.31□□□□□ -0.6
COCH-211ENST00000557065 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
COCH-211ENST00000557065 LTN1O94822 1766 aa11.31□□□□□ -0.6
COCH-211ENST00000557065 INSRP06213 1382 aa11.3□□□□□ -0.6
COCH-211ENST00000557065 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
COCH-211ENST00000557065 FLT4P35916 1363 aa11.29□□□□□ -0.6
COCH-211ENST00000557065 KIF24Q5T7B8 1368 aa11.29□□□□□ -0.6
COCH-211ENST00000557065 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
COCH-211ENST00000557065 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
COCH-211ENST00000557065 KAT6BQ8WYB5 2073 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 GPR162Q16538 588 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 EMILIN1Q9Y6C2 1016 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
COCH-211ENST00000557065 MEGF6O75095 1541 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 SPG7Q9UQ90 795 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 WASHC2AQ641Q2 1341 aa11.27□□□□□ -0.61
COCH-211ENST00000557065 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
COCH-211ENST00000557065 NSD2O96028 1365 aa11.26□□□□□ -0.61
COCH-211ENST00000557065 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
COCH-211ENST00000557065 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
COCH-211ENST00000557065 CYP27B1O15528 508 aa11.25□□□□□ -0.61
COCH-211ENST00000557065 COL23A1Q86Y22 540 aaPredicted RBP11.25□□□□□ -0.61
COCH-211ENST00000557065 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
COCH-211ENST00000557065 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
COCH-211ENST00000557065 BTAF1O14981 1849 aa11.24□□□□□ -0.61
COCH-211ENST00000557065 EIF4G2P78344 907 aaKnown RBP eCLIP11.24□□□□□ -0.61
COCH-211ENST00000557065 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
COCH-211ENST00000557065 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
COCH-211ENST00000557065 EYA1Q99502 592 aa11.24□□□□□ -0.61
COCH-211ENST00000557065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.617e-8■□□□□ 9.9
COCH-211ENST00000557065 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
COCH-211ENST00000557065 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
COCH-211ENST00000557065 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
COCH-211ENST00000557065 PIGBQ92521 554 aa11.23□□□□□ -0.61
COCH-211ENST00000557065 MYOM1P52179 1685 aa11.22□□□□□ -0.61
COCH-211ENST00000557065 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
COCH-211ENST00000557065 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
COCH-211ENST00000557065 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.61
COCH-211ENST00000557065 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
COCH-211ENST00000557065 AK7Q96M32 723 aa11.21□□□□□ -0.61
COCH-211ENST00000557065 PANK3Q9H999 370 aa11.21□□□□□ -0.61
COCH-211ENST00000557065 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.61
COCH-211ENST00000557065 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
COCH-211ENST00000557065 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
COCH-211ENST00000557065 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
COCH-211ENST00000557065 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
COCH-211ENST00000557065 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
COCH-211ENST00000557065 GRIN3BO60391 1043 aa11.19□□□□□ -0.62
COCH-211ENST00000557065 PHKG2P15735 406 aa11.19□□□□□ -0.62
COCH-211ENST00000557065 SIK1P57059 783 aa11.19□□□□□ -0.62
COCH-211ENST00000557065 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
COCH-211ENST00000557065 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
COCH-211ENST00000557065 ASAP1Q9ULH1 1129 aa11.18□□□□□ -0.62
COCH-211ENST00000557065 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
COCH-211ENST00000557065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
COCH-211ENST00000557065 PHF14O94880 888 aa11.17□□□□□ -0.62
COCH-211ENST00000557065 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
COCH-211ENST00000557065 PLEKHO1Q53GL0 409 aaPredicted RBP11.17□□□□□ -0.62
COCH-211ENST00000557065 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
COCH-211ENST00000557065 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
COCH-211ENST00000557065 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
COCH-211ENST00000557065 DOT1LQ8TEK3 1739 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
COCH-211ENST00000557065 SSFA2P28290 1259 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 AMOTQ4VCS5 1084 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
COCH-211ENST00000557065 YBX3P16989 372 aaKnown RBP eCLIP11.15□□□□□ -0.62
COCH-211ENST00000557065 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms