RNA–Protein interactions for RNA: ENST00000557059.1

TTC7B-212, Transcript of tetratricopeptide repeat domain 7B, humanhuman

TSL 4

Gene TTC7B, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7B-212ENST00000557059 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
TTC7B-212ENST00000557059 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
TTC7B-212ENST00000557059 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
TTC7B-212ENST00000557059 TNS1Q9HBL0 1735 aaKnown RBP18.2■□□□□ 0.5
TTC7B-212ENST00000557059 PLEKHG2Q9H7P9 1386 aa18.19■□□□□ 0.5
TTC7B-212ENST00000557059 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
TTC7B-212ENST00000557059 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.5
TTC7B-212ENST00000557059 BCL9O00512 1426 aa18.18■□□□□ 0.5
TTC7B-212ENST00000557059 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
TTC7B-212ENST00000557059 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
TTC7B-212ENST00000557059 DOT1LQ8TEK3 1739 aa18.17■□□□□ 0.5
TTC7B-212ENST00000557059 NHSQ6T4R5 1651 aa18.16■□□□□ 0.5
TTC7B-212ENST00000557059 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
TTC7B-212ENST00000557059 HMOX1P09601 288 aa18.15■□□□□ 0.5
TTC7B-212ENST00000557059 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
TTC7B-212ENST00000557059 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
TTC7B-212ENST00000557059 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
TTC7B-212ENST00000557059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
TTC7B-212ENST00000557059 TOGARAM1Q9Y4F4 1720 aa18.14■□□□□ 0.49
TTC7B-212ENST00000557059 CYP27B1O15528 508 aa18.13■□□□□ 0.49
TTC7B-212ENST00000557059 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
TTC7B-212ENST00000557059 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
TTC7B-212ENST00000557059 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
TTC7B-212ENST00000557059 TRIM37O94972 964 aa18.11■□□□□ 0.49
TTC7B-212ENST00000557059 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
TTC7B-212ENST00000557059 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
TTC7B-212ENST00000557059 BTAF1O14981 1849 aa18.09■□□□□ 0.49
TTC7B-212ENST00000557059 ANP32CO43423 234 aa18.09■□□□□ 0.49
TTC7B-212ENST00000557059 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
TTC7B-212ENST00000557059 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
TTC7B-212ENST00000557059 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
TTC7B-212ENST00000557059 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
TTC7B-212ENST00000557059 PTF1AQ7RTS3 328 aa18.09■□□□□ 0.49
TTC7B-212ENST00000557059 ITGB4P16144 1822 aa18.09■□□□□ 0.49
TTC7B-212ENST00000557059 PHKG2P15735 406 aa18.08■□□□□ 0.48
TTC7B-212ENST00000557059 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
TTC7B-212ENST00000557059 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
TTC7B-212ENST00000557059 RGPD3A6NKT7 1758 aaPredicted RBP18.07■□□□□ 0.48
TTC7B-212ENST00000557059 RGPD4Q7Z3J3 1758 aa18.07■□□□□ 0.48
TTC7B-212ENST00000557059 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
TTC7B-212ENST00000557059 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
TTC7B-212ENST00000557059 ACSBG1Q96GR2 724 aa18.07■□□□□ 0.48
TTC7B-212ENST00000557059 KCNQ2O43526 872 aa18.06■□□□□ 0.48
TTC7B-212ENST00000557059 SF3B2Q13435 895 aaKnown RBP18.06■□□□□ 0.48
TTC7B-212ENST00000557059 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
TTC7B-212ENST00000557059 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
TTC7B-212ENST00000557059 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
TTC7B-212ENST00000557059 FCHSD2O94868 740 aa18.05■□□□□ 0.48
TTC7B-212ENST00000557059 ADAMTS7Q9UKP4 1686 aa18.05■□□□□ 0.48
TTC7B-212ENST00000557059 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
TTC7B-212ENST00000557059 RREB1Q92766 1687 aa18.04■□□□□ 0.48
TTC7B-212ENST00000557059 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
TTC7B-212ENST00000557059 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
TTC7B-212ENST00000557059 DEFB132Q7Z7B7 95 aa18.04■□□□□ 0.48
TTC7B-212ENST00000557059 APBA3O96018 575 aa18.03■□□□□ 0.48
TTC7B-212ENST00000557059 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
TTC7B-212ENST00000557059 BAG6P46379 1132 aa18.02■□□□□ 0.48
TTC7B-212ENST00000557059 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
TTC7B-212ENST00000557059 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.48
TTC7B-212ENST00000557059 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
TTC7B-212ENST00000557059 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
TTC7B-212ENST00000557059 EN1Q05925 392 aaPredicted RBP18■□□□□ 0.47
TTC7B-212ENST00000557059 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
TTC7B-212ENST00000557059 AKAP4Q5JQC9 854 aa18■□□□□ 0.47
TTC7B-212ENST00000557059 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
TTC7B-212ENST00000557059 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
TTC7B-212ENST00000557059 PLEKHF1Q96S99 279 aa18■□□□□ 0.47
TTC7B-212ENST00000557059 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
TTC7B-212ENST00000557059 LY75O60449 1722 aa17.99■□□□□ 0.47
TTC7B-212ENST00000557059 DCAF5Q96JK2 942 aa17.99■□□□□ 0.47
TTC7B-212ENST00000557059 MAP3K5Q99683 1374 aa17.99■□□□□ 0.47
TTC7B-212ENST00000557059 MRC1P22897 1456 aa17.99■□□□□ 0.47
TTC7B-212ENST00000557059 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
TTC7B-212ENST00000557059 CAMKK2Q96RR4 588 aa17.98■□□□□ 0.47
TTC7B-212ENST00000557059 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
TTC7B-212ENST00000557059 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
TTC7B-212ENST00000557059 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
TTC7B-212ENST00000557059 PLSCR1O15162 318 aa17.96■□□□□ 0.47
TTC7B-212ENST00000557059 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
TTC7B-212ENST00000557059 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
TTC7B-212ENST00000557059 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
TTC7B-212ENST00000557059 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
TTC7B-212ENST00000557059 PIGBQ92521 554 aa17.95■□□□□ 0.46
TTC7B-212ENST00000557059 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
TTC7B-212ENST00000557059 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
TTC7B-212ENST00000557059 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
TTC7B-212ENST00000557059 PNNQ9H307 717 aaKnown RBP17.94■□□□□ 0.46
TTC7B-212ENST00000557059 LGR6Q9HBX8 967 aa17.94■□□□□ 0.46
TTC7B-212ENST00000557059 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
TTC7B-212ENST00000557059 NEFMP07197 916 aa17.93■□□□□ 0.46
TTC7B-212ENST00000557059 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
TTC7B-212ENST00000557059 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
TTC7B-212ENST00000557059 CABP4P57796 275 aa17.92■□□□□ 0.46
TTC7B-212ENST00000557059 NFE2L2Q16236 605 aa17.92■□□□□ 0.46
TTC7B-212ENST00000557059 PROM2Q8N271 834 aa17.92■□□□□ 0.46
TTC7B-212ENST00000557059 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
TTC7B-212ENST00000557059 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
TTC7B-212ENST00000557059 TXNRD1Q16881 649 aa17.91■□□□□ 0.46
TTC7B-212ENST00000557059 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
TTC7B-212ENST00000557059 RUNDC1Q96C34 613 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms