RNA–Protein interactions for RNA: ENST00000557018.5

PPP4R3A-211, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-211ENST00000557018 USHBP1Q8N6Y0 703 aa23.79■■□□□ 1.4
PPP4R3A-211ENST00000557018 CARD14Q9BXL6 1004 aa23.79■■□□□ 1.4
PPP4R3A-211ENST00000557018 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
PPP4R3A-211ENST00000557018 HSP90AB2PQ58FF8 381 aa23.78■■□□□ 1.4
PPP4R3A-211ENST00000557018 SMG6Q86US8 1419 aaKnown RBP23.77■■□□□ 1.4
PPP4R3A-211ENST00000557018 SLC27A3Q5K4L6 730 aa23.77■■□□□ 1.4
PPP4R3A-211ENST00000557018 MYOM1P52179 1685 aa23.76■■□□□ 1.39
PPP4R3A-211ENST00000557018 YY1P25490 414 aa23.76■■□□□ 1.39
PPP4R3A-211ENST00000557018 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
PPP4R3A-211ENST00000557018 INSRP06213 1382 aa23.76■■□□□ 1.39
PPP4R3A-211ENST00000557018 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
PPP4R3A-211ENST00000557018 CGNL1Q0VF96 1302 aa23.75■■□□□ 1.39
PPP4R3A-211ENST00000557018 FLT4P35916 1363 aa23.75■■□□□ 1.39
PPP4R3A-211ENST00000557018 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
PPP4R3A-211ENST00000557018 NSD3Q9BZ95 1437 aa23.75■■□□□ 1.39
PPP4R3A-211ENST00000557018 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
PPP4R3A-211ENST00000557018 SHANK3Q9BYB0 1731 aa23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 KCNQ4P56696 695 aa23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 FHDC1Q9C0D6 1143 aaPredicted RBP23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 NSD2O96028 1365 aa23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 KIF24Q5T7B8 1368 aa23.73■■□□□ 1.39
PPP4R3A-211ENST00000557018 SYT17Q9BSW7 474 aa23.72■■□□□ 1.39
PPP4R3A-211ENST00000557018 DOT1LQ8TEK3 1739 aa23.72■■□□□ 1.39
PPP4R3A-211ENST00000557018 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
PPP4R3A-211ENST00000557018 ARXQ96QS3 562 aa23.69■■□□□ 1.38
PPP4R3A-211ENST00000557018 PPM1GO15355 546 aaPredicted RBP23.68■■□□□ 1.38
PPP4R3A-211ENST00000557018 POLR3GLQ9BT43 218 aa23.68■■□□□ 1.38
PPP4R3A-211ENST00000557018 TFCP2L1Q9NZI6 479 aa23.68■■□□□ 1.38
PPP4R3A-211ENST00000557018 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
PPP4R3A-211ENST00000557018 CCNL1Q9UK58 526 aaPredicted RBP23.67■■□□□ 1.38
PPP4R3A-211ENST00000557018 PCDH11XQ9BZA7 1347 aa23.66■■□□□ 1.38
PPP4R3A-211ENST00000557018 PCDH11YQ9BZA8 1340 aa23.66■■□□□ 1.38
PPP4R3A-211ENST00000557018 SLC16A10Q8TF71 515 aa23.66■■□□□ 1.38
PPP4R3A-211ENST00000557018 LY75O60449 1722 aa23.64■■□□□ 1.38
PPP4R3A-211ENST00000557018 WASHC2AQ641Q2 1341 aa23.62■■□□□ 1.37
PPP4R3A-211ENST00000557018 CYP27B1O15528 508 aa23.62■■□□□ 1.37
PPP4R3A-211ENST00000557018 QSER1Q2KHR3 1735 aa23.62■■□□□ 1.37
PPP4R3A-211ENST00000557018 POLD1P28340 1107 aa23.61■■□□□ 1.37
PPP4R3A-211ENST00000557018 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
PPP4R3A-211ENST00000557018 UTRNP46939 3433 aa23.6■■□□□ 1.37
PPP4R3A-211ENST00000557018 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
PPP4R3A-211ENST00000557018 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
PPP4R3A-211ENST00000557018 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
PPP4R3A-211ENST00000557018 EYA1Q99502 592 aa23.58■■□□□ 1.37
PPP4R3A-211ENST00000557018 NCAPD2Q15021 1401 aa23.58■■□□□ 1.36
PPP4R3A-211ENST00000557018 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
PPP4R3A-211ENST00000557018 HSPA5P11021 654 aaKnown RBP23.57■■□□□ 1.36
PPP4R3A-211ENST00000557018 TNNT2P45379 298 aaPredicted RBP23.57■■□□□ 1.36
PPP4R3A-211ENST00000557018 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
PPP4R3A-211ENST00000557018 SPG7Q9UQ90 795 aa23.57■■□□□ 1.36
PPP4R3A-211ENST00000557018 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
PPP4R3A-211ENST00000557018 PALLDQ8WX93 1383 aa23.56■■□□□ 1.36
PPP4R3A-211ENST00000557018 MSH5O43196 834 aa23.56■■□□□ 1.36
PPP4R3A-211ENST00000557018 MAP2P11137 1827 aaKnown RBP23.55■■□□□ 1.36
PPP4R3A-211ENST00000557018 COL23A1Q86Y22 540 aaPredicted RBP23.55■■□□□ 1.36
PPP4R3A-211ENST00000557018 PKD1L3Q7Z443 1732 aa23.54■■□□□ 1.36
PPP4R3A-211ENST00000557018 NKX1-1Q15270 411 aaPredicted RBP23.54■■□□□ 1.36
PPP4R3A-211ENST00000557018 PANK3Q9H999 370 aa23.54■■□□□ 1.36
PPP4R3A-211ENST00000557018 SMARCC1Q92922 1105 aaPredicted RBP23.53■■□□□ 1.36
PPP4R3A-211ENST00000557018 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
PPP4R3A-211ENST00000557018 HMGB2P26583 209 aaKnown RBP23.52■■□□□ 1.36
PPP4R3A-211ENST00000557018 EIF4A2Q14240 407 aaKnown RBP23.52■■□□□ 1.36
PPP4R3A-211ENST00000557018 PIGBQ92521 554 aa23.52■■□□□ 1.36
PPP4R3A-211ENST00000557018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
PPP4R3A-211ENST00000557018 TOGARAM1Q9Y4F4 1720 aa23.52■■□□□ 1.36
PPP4R3A-211ENST00000557018 GPR162Q16538 588 aa23.51■■□□□ 1.35
PPP4R3A-211ENST00000557018 C5P01031 1676 aa23.5■■□□□ 1.35
PPP4R3A-211ENST00000557018 ITGB4P16144 1822 aa23.49■■□□□ 1.35
PPP4R3A-211ENST00000557018 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
PPP4R3A-211ENST00000557018 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
PPP4R3A-211ENST00000557018 FLAD1Q8NFF5 587 aa23.48■■□□□ 1.35
PPP4R3A-211ENST00000557018 PHKG2P15735 406 aa23.47■■□□□ 1.35
PPP4R3A-211ENST00000557018 ZNF784Q8NCA9 323 aaPredicted RBP23.47■■□□□ 1.35
PPP4R3A-211ENST00000557018 NLGN2Q8NFZ4 835 aa23.47■■□□□ 1.35
PPP4R3A-211ENST00000557018 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
PPP4R3A-211ENST00000557018 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
PPP4R3A-211ENST00000557018 AK7Q96M32 723 aa23.46■■□□□ 1.35
PPP4R3A-211ENST00000557018 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
PPP4R3A-211ENST00000557018 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
PPP4R3A-211ENST00000557018 C4BP0C0L5 1744 aa23.43■■□□□ 1.34
PPP4R3A-211ENST00000557018 LOC102724428A0A0B4J2F2 783 aa23.43■■□□□ 1.34
PPP4R3A-211ENST00000557018 SIK1P57059 783 aa23.43■■□□□ 1.34
PPP4R3A-211ENST00000557018 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
PPP4R3A-211ENST00000557018 MORC1Q86VD1 984 aa23.42■■□□□ 1.34
PPP4R3A-211ENST00000557018 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
PPP4R3A-211ENST00000557018 CHD4Q14839 1912 aa23.41■■□□□ 1.34
PPP4R3A-211ENST00000557018 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
PPP4R3A-211ENST00000557018 PHF14O94880 888 aa23.41■■□□□ 1.34
PPP4R3A-211ENST00000557018 LINC00116Q8NCU8 138 aa23.41■■□□□ 1.34
PPP4R3A-211ENST00000557018 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
PPP4R3A-211ENST00000557018 SMIM5Q71RC9 77 aa23.4■■□□□ 1.34
PPP4R3A-211ENST00000557018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.39■■□□□ 1.33
PPP4R3A-211ENST00000557018 ATP6V1AP38606 617 aa23.39■■□□□ 1.33
PPP4R3A-211ENST00000557018 ATG3Q9NT62 314 aa23.39■■□□□ 1.33
PPP4R3A-211ENST00000557018 ITPK1Q13572 414 aa23.38■■□□□ 1.33
PPP4R3A-211ENST00000557018 PLEKHO1Q53GL0 409 aaPredicted RBP23.38■■□□□ 1.33
PPP4R3A-211ENST00000557018 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
PPP4R3A-211ENST00000557018 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
PPP4R3A-211ENST00000557018 SSFA2P28290 1259 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms