RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-215ENST00000556959 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 GGNBP2Q9H3C7 697 aa11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 CCDC7Q96M83 1385 aa11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 SENP3-EIF4A1A0A087X0R7 540 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 IL2RBP14784 551 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 SMIM5Q71RC9 77 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 IP6K1Q92551 441 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 COG3Q96JB2 828 aa11.48□□□□□ -0.57
SIPA1L1-215ENST00000556959 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
SIPA1L1-215ENST00000556959 PNPLA7Q6ZV29 1317 aa11.47□□□□□ -0.57
SIPA1L1-215ENST00000556959 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
SIPA1L1-215ENST00000556959 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 HOXC9P31274 260 aa11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 GPR162Q16538 588 aa11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.57
SIPA1L1-215ENST00000556959 LY75O60449 1722 aa11.46□□□□□ -0.58
SIPA1L1-215ENST00000556959 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
SIPA1L1-215ENST00000556959 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SIPA1L1-215ENST00000556959 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
SIPA1L1-215ENST00000556959 MSL1Q68DK7 614 aa11.45□□□□□ -0.58
SIPA1L1-215ENST00000556959 QSER1Q2KHR3 1735 aa11.45□□□□□ -0.58
SIPA1L1-215ENST00000556959 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
SIPA1L1-215ENST00000556959 NSD2O96028 1365 aa11.44□□□□□ -0.58
SIPA1L1-215ENST00000556959 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
SIPA1L1-215ENST00000556959 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
SIPA1L1-215ENST00000556959 AMIGO3Q86WK7 504 aa11.43□□□□□ -0.58
SIPA1L1-215ENST00000556959 MEGF6O75095 1541 aa11.43□□□□□ -0.58
SIPA1L1-215ENST00000556959 AMPHP49418 695 aa11.42□□□□□ -0.58
SIPA1L1-215ENST00000556959 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
SIPA1L1-215ENST00000556959 COL23A1Q86Y22 540 aaPredicted RBP11.42□□□□□ -0.58
SIPA1L1-215ENST00000556959 TFCP2L1Q9NZI6 479 aa11.42□□□□□ -0.58
SIPA1L1-215ENST00000556959 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
SIPA1L1-215ENST00000556959 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
SIPA1L1-215ENST00000556959 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
SIPA1L1-215ENST00000556959 NBPF6Q5VWK0 638 aa11.41□□□□□ -0.58
SIPA1L1-215ENST00000556959 NBPF4Q96M43 638 aa11.41□□□□□ -0.58
SIPA1L1-215ENST00000556959 ITGB4P16144 1822 aa11.41□□□□□ -0.58
SIPA1L1-215ENST00000556959 MSH5O43196 834 aa11.4□□□□□ -0.58
SIPA1L1-215ENST00000556959 EMILIN1Q9Y6C2 1016 aa11.4□□□□□ -0.58
SIPA1L1-215ENST00000556959 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
SIPA1L1-215ENST00000556959 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
SIPA1L1-215ENST00000556959 TOGARAM1Q9Y4F4 1720 aa11.39□□□□□ -0.59
SIPA1L1-215ENST00000556959 INSRP06213 1382 aa11.39□□□□□ -0.59
SIPA1L1-215ENST00000556959 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
SIPA1L1-215ENST00000556959 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
SIPA1L1-215ENST00000556959 C5P01031 1676 aa11.38□□□□□ -0.59
SIPA1L1-215ENST00000556959 FLT4P35916 1363 aa11.38□□□□□ -0.59
SIPA1L1-215ENST00000556959 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
SIPA1L1-215ENST00000556959 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
SIPA1L1-215ENST00000556959 PANK3Q9H999 370 aa11.37□□□□□ -0.59
SIPA1L1-215ENST00000556959 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
SIPA1L1-215ENST00000556959 POLD1P28340 1107 aa11.36□□□□□ -0.59
SIPA1L1-215ENST00000556959 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
SIPA1L1-215ENST00000556959 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
SIPA1L1-215ENST00000556959 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
SIPA1L1-215ENST00000556959 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
SIPA1L1-215ENST00000556959 UBR3Q6ZT12 1888 aa11.35□□□□□ -0.59
SIPA1L1-215ENST00000556959 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
SIPA1L1-215ENST00000556959 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 ATP10DQ9P241 1426 aa11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
SIPA1L1-215ENST00000556959 CYP27B1O15528 508 aa11.33□□□□□ -0.6
SIPA1L1-215ENST00000556959 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
SIPA1L1-215ENST00000556959 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
SIPA1L1-215ENST00000556959 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
SIPA1L1-215ENST00000556959 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SIPA1L1-215ENST00000556959 PHF14O94880 888 aa11.32□□□□□ -0.6
SIPA1L1-215ENST00000556959 EYA1Q99502 592 aa11.32□□□□□ -0.6
SIPA1L1-215ENST00000556959 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
SIPA1L1-215ENST00000556959 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
SIPA1L1-215ENST00000556959 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
SIPA1L1-215ENST00000556959 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
SIPA1L1-215ENST00000556959 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
SIPA1L1-215ENST00000556959 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
SIPA1L1-215ENST00000556959 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
SIPA1L1-215ENST00000556959 PIGBQ92521 554 aa11.29□□□□□ -0.6
SIPA1L1-215ENST00000556959 ITPK1Q13572 414 aa11.28□□□□□ -0.6
SIPA1L1-215ENST00000556959 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
SIPA1L1-215ENST00000556959 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
SIPA1L1-215ENST00000556959 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 KIAA1551Q9HCM1 1747 aa11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 MYH14Q7Z406 1995 aaKnown RBP11.27□□□□□ -0.61
SIPA1L1-215ENST00000556959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
SIPA1L1-215ENST00000556959 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
SIPA1L1-215ENST00000556959 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
SIPA1L1-215ENST00000556959 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
SIPA1L1-215ENST00000556959 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms