RNA–Protein interactions for RNA: ENST00000556908.5

COCH-210, Transcript of cochlin, humanhuman

TSL 3

Gene COCH, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-210ENST00000556908 PRIM1P49642 420 aaKnown RBP26.81■■□□□ 1.88
COCH-210ENST00000556908 NHSQ6T4R5 1651 aa26.81■■□□□ 1.88
COCH-210ENST00000556908 LRRC4BQ9NT99 713 aa26.8■■□□□ 1.88
COCH-210ENST00000556908 PPM1GO15355 546 aaPredicted RBP26.79■■□□□ 1.88
COCH-210ENST00000556908 SLC15A2Q16348 729 aa26.79■■□□□ 1.88
COCH-210ENST00000556908 SMG6Q86US8 1419 aaKnown RBP26.79■■□□□ 1.88
COCH-210ENST00000556908 RAPGEF4Q8WZA2 1011 aa26.78■■□□□ 1.88
COCH-210ENST00000556908 NCAPD2Q15021 1401 aa26.77■■□□□ 1.88
COCH-210ENST00000556908 TATP17735 454 aaPredicted RBP26.77■■□□□ 1.88
COCH-210ENST00000556908 NSD2O96028 1365 aa26.76■■□□□ 1.87
COCH-210ENST00000556908 EYA1Q99502 592 aa26.76■■□□□ 1.87
COCH-210ENST00000556908 TNNT2P45379 298 aaPredicted RBP26.75■■□□□ 1.87
COCH-210ENST00000556908 CYP27B1O15528 508 aa26.74■■□□□ 1.87
COCH-210ENST00000556908 SPON1Q9HCB6 807 aa26.74■■□□□ 1.87
COCH-210ENST00000556908 STK32BQ9NY57 414 aa26.74■■□□□ 1.87
COCH-210ENST00000556908 SHANK3Q9BYB0 1731 aa26.73■■□□□ 1.87
COCH-210ENST00000556908 KIF7Q2M1P5 1343 aa26.72■■□□□ 1.87
COCH-210ENST00000556908 SYTL4Q96C24 671 aaPredicted RBP26.72■■□□□ 1.87
COCH-210ENST00000556908 EIF4A2Q14240 407 aaKnown RBP26.71■■□□□ 1.87
COCH-210ENST00000556908 BTAF1O14981 1849 aa26.7■■□□□ 1.87
COCH-210ENST00000556908 ZNF827Q17R98 1081 aa26.7■■□□□ 1.86
COCH-210ENST00000556908 SLC27A3Q5K4L6 730 aa26.69■■□□□ 1.86
COCH-210ENST00000556908 AKT1S1Q96B36 256 aa26.69■■□□□ 1.86
COCH-210ENST00000556908 ANKRD26Q9UPS8 1709 aa26.68■■□□□ 1.86
COCH-210ENST00000556908 ZBTB7AO95365 584 aa26.68■■□□□ 1.86
COCH-210ENST00000556908 PTGER2P43116 358 aa26.68■■□□□ 1.86
COCH-210ENST00000556908 KCNQ4P56696 695 aa26.68■■□□□ 1.86
COCH-210ENST00000556908 AMER1Q5JTC6 1135 aaPredicted RBP26.68■■□□□ 1.86
COCH-210ENST00000556908 PCDH11XQ9BZA7 1347 aa26.67■■□□□ 1.86
COCH-210ENST00000556908 PCDH11YQ9BZA8 1340 aa26.67■■□□□ 1.86
COCH-210ENST00000556908 PER1O15534 1290 aaPredicted RBP26.67■■□□□ 1.86
COCH-210ENST00000556908 NKX1-1Q15270 411 aaPredicted RBP26.67■■□□□ 1.86
COCH-210ENST00000556908 CASZ1Q86V15 1759 aa26.66■■□□□ 1.86
COCH-210ENST00000556908 PAPPAQ13219 1627 aa26.65■■□□□ 1.86
COCH-210ENST00000556908 MAP2P11137 1827 aaKnown RBP26.65■■□□□ 1.86
COCH-210ENST00000556908 MORC1Q86VD1 984 aa26.65■■□□□ 1.86
COCH-210ENST00000556908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.65■■□□□ 1.867e-8■□□□□ 9.9
COCH-210ENST00000556908 KNSTRNQ9Y448 316 aa26.65■■□□□ 1.86
COCH-210ENST00000556908 SGIP1Q9BQI5 828 aa26.64■■□□□ 1.86
COCH-210ENST00000556908 ATF5Q9Y2D1 282 aaPredicted RBP26.64■■□□□ 1.86
COCH-210ENST00000556908 KAT6BQ8WYB5 2073 aa26.62■■□□□ 1.85
COCH-210ENST00000556908 SPG7Q9UQ90 795 aa26.61■■□□□ 1.85
COCH-210ENST00000556908 IGSF1Q8N6C5 1336 aa26.61■■□□□ 1.85
COCH-210ENST00000556908 MTFR1LQ9H019 292 aa26.6■■□□□ 1.85
COCH-210ENST00000556908 UTRNP46939 3433 aa26.59■■□□□ 1.85
COCH-210ENST00000556908 DOT1LQ8TEK3 1739 aa26.59■■□□□ 1.85
COCH-210ENST00000556908 MPRIPQ6WCQ1 1025 aa26.58■■□□□ 1.85
COCH-210ENST00000556908 PPP1R1BQ9UD71 204 aaPredicted RBP26.58■■□□□ 1.85
COCH-210ENST00000556908 PHKG2P15735 406 aa26.57■■□□□ 1.84
COCH-210ENST00000556908 PIGBQ92521 554 aa26.57■■□□□ 1.84
COCH-210ENST00000556908 CCNL1Q9UK58 526 aaPredicted RBP26.57■■□□□ 1.84
COCH-210ENST00000556908 IFNL2Q8IZJ0 200 aa26.55■■□□□ 1.84
COCH-210ENST00000556908 PNPLA7Q6ZV29 1317 aa26.55■■□□□ 1.84
COCH-210ENST00000556908 PKD1L3Q7Z443 1732 aa26.54■■□□□ 1.84
COCH-210ENST00000556908 IL13P35225 146 aa26.54■■□□□ 1.84
COCH-210ENST00000556908 LY75O60449 1722 aa26.53■■□□□ 1.84
COCH-210ENST00000556908 AEBP1Q8IUX7 1158 aa26.52■■□□□ 1.84
COCH-210ENST00000556908 PLEKHG2Q9H7P9 1386 aa26.52■■□□□ 1.84
COCH-210ENST00000556908 TFCP2L1Q9NZI6 479 aa26.52■■□□□ 1.84
COCH-210ENST00000556908 SLC16A10Q8TF71 515 aa26.51■■□□□ 1.83
COCH-210ENST00000556908 PALLDQ8WX93 1383 aa26.5■■□□□ 1.83
COCH-210ENST00000556908 TOGARAM1Q9Y4F4 1720 aa26.49■■□□□ 1.83
COCH-210ENST00000556908 MTHFSP49914 203 aa26.49■■□□□ 1.83
COCH-210ENST00000556908 SMARCC1Q92922 1105 aaPredicted RBP26.48■■□□□ 1.83
COCH-210ENST00000556908 COL23A1Q86Y22 540 aaPredicted RBP26.47■■□□□ 1.83
COCH-210ENST00000556908 SYT17Q9BSW7 474 aa26.47■■□□□ 1.83
COCH-210ENST00000556908 ASAP1Q9ULH1 1129 aa26.47■■□□□ 1.83
COCH-210ENST00000556908 PLEKHO1Q53GL0 409 aaPredicted RBP26.46■■□□□ 1.83
COCH-210ENST00000556908 CC2D1BQ5T0F9 858 aaKnown RBP26.46■■□□□ 1.83
COCH-210ENST00000556908 SULT6B1Q6IMI4 303 aa26.46■■□□□ 1.83
COCH-210ENST00000556908 FHDC1Q9C0D6 1143 aaPredicted RBP26.46■■□□□ 1.83
COCH-210ENST00000556908 KDRP35968 1356 aa26.46■■□□□ 1.83
COCH-210ENST00000556908 ARXQ96QS3 562 aa26.45■■□□□ 1.82
COCH-210ENST00000556908 AMOTQ4VCS5 1084 aa26.44■■□□□ 1.82
COCH-210ENST00000556908 ATG3Q9NT62 314 aa26.44■■□□□ 1.82
COCH-210ENST00000556908 TMOD3Q9NYL9 352 aa26.44■■□□□ 1.82
COCH-210ENST00000556908 NPC1L1Q9UHC9 1359 aa26.44■■□□□ 1.82
COCH-210ENST00000556908 GOLGB1Q14789 3259 aaKnown RBP26.43■■□□□ 1.82
COCH-210ENST00000556908 AMIGO3Q86WK7 504 aa26.43■■□□□ 1.82
COCH-210ENST00000556908 ERVV-2B6SEH9 535 aa26.42■■□□□ 1.82
COCH-210ENST00000556908 LOC102724428A0A0B4J2F2 783 aa26.41■■□□□ 1.82
COCH-210ENST00000556908 SIK1P57059 783 aa26.41■■□□□ 1.82
COCH-210ENST00000556908 DCAF5Q96JK2 942 aa26.41■■□□□ 1.82
COCH-210ENST00000556908 ITGB4P16144 1822 aa26.4■■□□□ 1.82
COCH-210ENST00000556908 ZNF530Q6P9A1 599 aaPredicted RBP26.4■■□□□ 1.82
COCH-210ENST00000556908 QSER1Q2KHR3 1735 aa26.39■■□□□ 1.82
COCH-210ENST00000556908 HSP90AB1P08238 724 aaKnown RBP26.39■■□□□ 1.82
COCH-210ENST00000556908 ITPK1Q13572 414 aa26.39■■□□□ 1.82
COCH-210ENST00000556908 SLC4A9Q96Q91 983 aa26.39■■□□□ 1.82
COCH-210ENST00000556908 HMGB2P26583 209 aaKnown RBP26.38■■□□□ 1.81
COCH-210ENST00000556908 LINC00116Q8NCU8 138 aa26.38■■□□□ 1.81
COCH-210ENST00000556908 KDM6AO15550 1401 aaPredicted RBP26.38■■□□□ 1.81
COCH-210ENST00000556908 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
COCH-210ENST00000556908 SMIM5Q71RC9 77 aa26.37■■□□□ 1.81
COCH-210ENST00000556908 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
COCH-210ENST00000556908 COL24A1Q17RW2 1714 aa26.34■■□□□ 1.81
COCH-210ENST00000556908 DIAPH1O60610 1272 aaKnown RBP26.34■■□□□ 1.81
COCH-210ENST00000556908 FLAD1Q8NFF5 587 aa26.34■■□□□ 1.81
COCH-210ENST00000556908 HMOX1P09601 288 aa26.33■■□□□ 1.81
COCH-210ENST00000556908 POLD1P28340 1107 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms