RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
HNRNPC-227ENST00000556897 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
HNRNPC-227ENST00000556897 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
HNRNPC-227ENST00000556897 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-227ENST00000556897 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
HNRNPC-227ENST00000556897 NSD2O96028 1365 aa12.8□□□□□ -0.36
HNRNPC-227ENST00000556897 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
HNRNPC-227ENST00000556897 TUBGCP6Q96RT7 1819 aa12.79□□□□□ -0.36
HNRNPC-227ENST00000556897 FBLN1P23142 703 aa12.79□□□□□ -0.36
HNRNPC-227ENST00000556897 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-227ENST00000556897 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-227ENST00000556897 HOXC9P31274 260 aa12.78□□□□□ -0.36
HNRNPC-227ENST00000556897 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-227ENST00000556897 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
HNRNPC-227ENST00000556897 MEGF6O75095 1541 aa12.78□□□□□ -0.36
HNRNPC-227ENST00000556897 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
HNRNPC-227ENST00000556897 AMPHP49418 695 aa12.77□□□□□ -0.37
HNRNPC-227ENST00000556897 COG3Q96JB2 828 aa12.77□□□□□ -0.37
HNRNPC-227ENST00000556897 LY75O60449 1722 aa12.76□□□□□ -0.37
HNRNPC-227ENST00000556897 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-227ENST00000556897 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-227ENST00000556897 PUS7Q96PZ0 661 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-227ENST00000556897 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
HNRNPC-227ENST00000556897 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
HNRNPC-227ENST00000556897 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
HNRNPC-227ENST00000556897 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
HNRNPC-227ENST00000556897 USP47Q96K76 1375 aa12.75□□□□□ -0.37
HNRNPC-227ENST00000556897 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
HNRNPC-227ENST00000556897 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-227ENST00000556897 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
HNRNPC-227ENST00000556897 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
HNRNPC-227ENST00000556897 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
HNRNPC-227ENST00000556897 TESK2Q96S53 571 aa12.74□□□□□ -0.37
HNRNPC-227ENST00000556897 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
HNRNPC-227ENST00000556897 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
HNRNPC-227ENST00000556897 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
HNRNPC-227ENST00000556897 TONSLQ96HA7 1378 aa12.71□□□□□ -0.37
HNRNPC-227ENST00000556897 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
HNRNPC-227ENST00000556897 ATP10DQ9P241 1426 aa12.71□□□□□ -0.38
HNRNPC-227ENST00000556897 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
HNRNPC-227ENST00000556897 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
HNRNPC-227ENST00000556897 C5P01031 1676 aa12.7□□□□□ -0.38
HNRNPC-227ENST00000556897 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-227ENST00000556897 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
HNRNPC-227ENST00000556897 FYB1O15117 783 aa12.69□□□□□ -0.38
HNRNPC-227ENST00000556897 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-227ENST00000556897 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
HNRNPC-227ENST00000556897 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
HNRNPC-227ENST00000556897 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
HNRNPC-227ENST00000556897 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
HNRNPC-227ENST00000556897 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
HNRNPC-227ENST00000556897 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-227ENST00000556897 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
HNRNPC-227ENST00000556897 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
HNRNPC-227ENST00000556897 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-227ENST00000556897 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
HNRNPC-227ENST00000556897 INSRP06213 1382 aa12.67□□□□□ -0.38
HNRNPC-227ENST00000556897 CYP27B1O15528 508 aa12.66□□□□□ -0.38
HNRNPC-227ENST00000556897 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
HNRNPC-227ENST00000556897 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
HNRNPC-227ENST00000556897 AK7Q96M32 723 aa12.66□□□□□ -0.38
HNRNPC-227ENST00000556897 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
HNRNPC-227ENST00000556897 PHF14O94880 888 aa12.65□□□□□ -0.38
HNRNPC-227ENST00000556897 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-227ENST00000556897 ADCY9O60503 1353 aa12.65□□□□□ -0.38
HNRNPC-227ENST00000556897 FLT4P35916 1363 aa12.65□□□□□ -0.38
HNRNPC-227ENST00000556897 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
HNRNPC-227ENST00000556897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-227ENST00000556897 PIGBQ92521 554 aa12.64□□□□□ -0.39
HNRNPC-227ENST00000556897 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-227ENST00000556897 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
HNRNPC-227ENST00000556897 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
HNRNPC-227ENST00000556897 TMF1P82094 1093 aa12.63□□□□□ -0.39
HNRNPC-227ENST00000556897 ITGB4P16144 1822 aa12.62□□□□□ -0.39
HNRNPC-227ENST00000556897 KIF24Q5T7B8 1368 aa12.62□□□□□ -0.39
HNRNPC-227ENST00000556897 HSPA6P17066 643 aa12.62□□□□□ -0.39
HNRNPC-227ENST00000556897 EMILIN1Q9Y6C2 1016 aa12.62□□□□□ -0.39
HNRNPC-227ENST00000556897 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
HNRNPC-227ENST00000556897 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
HNRNPC-227ENST00000556897 SIK1P57059 783 aa12.61□□□□□ -0.39
HNRNPC-227ENST00000556897 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
HNRNPC-227ENST00000556897 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 SSFA2P28290 1259 aa12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
HNRNPC-227ENST00000556897 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
HNRNPC-227ENST00000556897 GNPATO15228 680 aa12.59□□□□□ -0.39
HNRNPC-227ENST00000556897 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
HNRNPC-227ENST00000556897 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
HNRNPC-227ENST00000556897 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
HNRNPC-227ENST00000556897 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-227ENST00000556897 ITPK1Q13572 414 aa12.58□□□□□ -0.4
HNRNPC-227ENST00000556897 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
HNRNPC-227ENST00000556897 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
HNRNPC-227ENST00000556897 KIF3CO14782 793 aa12.57□□□□□ -0.4
HNRNPC-227ENST00000556897 MMP10P09238 476 aa12.57□□□□□ -0.4
HNRNPC-227ENST00000556897 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
HNRNPC-227ENST00000556897 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms