RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
LINC00871-204ENST00000556886 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
LINC00871-204ENST00000556886 MYCP01106 439 aaPredicted RBP11.6□□□□□ -0.55
LINC00871-204ENST00000556886 USP4Q13107 963 aa11.6□□□□□ -0.55
LINC00871-204ENST00000556886 EML3Q32P44 896 aa11.6□□□□□ -0.55
LINC00871-204ENST00000556886 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
LINC00871-204ENST00000556886 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
LINC00871-204ENST00000556886 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
LINC00871-204ENST00000556886 BMP1P13497 986 aa11.59□□□□□ -0.55
LINC00871-204ENST00000556886 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
LINC00871-204ENST00000556886 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
LINC00871-204ENST00000556886 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
LINC00871-204ENST00000556886 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.56
LINC00871-204ENST00000556886 ADH1AP07327 375 aa11.58□□□□□ -0.56
LINC00871-204ENST00000556886 AGBL1Q96MI9 1066 aa11.58□□□□□ -0.56
LINC00871-204ENST00000556886 RFX1P22670 979 aa11.57□□□□□ -0.56
LINC00871-204ENST00000556886 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
LINC00871-204ENST00000556886 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
LINC00871-204ENST00000556886 TRIM46Q7Z4K8 759 aa11.56□□□□□ -0.56
LINC00871-204ENST00000556886 KDF1Q8NAX2 398 aaPredicted RBP11.56□□□□□ -0.56
LINC00871-204ENST00000556886 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
LINC00871-204ENST00000556886 RELBQ01201 579 aa11.55□□□□□ -0.56
LINC00871-204ENST00000556886 MRPL14Q6P1L8 145 aaKnown RBP11.55□□□□□ -0.56
LINC00871-204ENST00000556886 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
LINC00871-204ENST00000556886 CYP2U1Q7Z449 544 aa11.54□□□□□ -0.56
LINC00871-204ENST00000556886 ARID3AQ99856 593 aa11.54□□□□□ -0.56
LINC00871-204ENST00000556886 ATP13A2Q9NQ11 1180 aa11.54□□□□□ -0.56
LINC00871-204ENST00000556886 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
LINC00871-204ENST00000556886 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
LINC00871-204ENST00000556886 C6orf118Q5T5N4 469 aa11.53□□□□□ -0.56
LINC00871-204ENST00000556886 TSEN34Q9BSV6 310 aaKnown RBP11.53□□□□□ -0.56
LINC00871-204ENST00000556886 GTF2IP78347 998 aa11.52□□□□□ -0.57
LINC00871-204ENST00000556886 ZNF395Q9H8N7 513 aaPredicted RBP11.52□□□□□ -0.57
LINC00871-204ENST00000556886 UPP2O95045 317 aa11.51□□□□□ -0.57
LINC00871-204ENST00000556886 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
LINC00871-204ENST00000556886 PTGIRP43119 386 aa11.51□□□□□ -0.57
LINC00871-204ENST00000556886 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
LINC00871-204ENST00000556886 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
LINC00871-204ENST00000556886 PCDHGA11Q9Y5H2 935 aa11.51□□□□□ -0.57
LINC00871-204ENST00000556886 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.5□□□□□ -0.57
LINC00871-204ENST00000556886 BMP2P12643 396 aa11.5□□□□□ -0.57
LINC00871-204ENST00000556886 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
LINC00871-204ENST00000556886 RAB6BQ9NRW1 208 aa11.5□□□□□ -0.57
LINC00871-204ENST00000556886 CLDN10P78369 228 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 SCARF1Q14162 830 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 TRIM50Q86XT4 487 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
LINC00871-204ENST00000556886 SPINT1O43278 529 aa11.48□□□□□ -0.57
LINC00871-204ENST00000556886 GNRH1P01148 92 aa11.48□□□□□ -0.57
LINC00871-204ENST00000556886 PSME1Q06323 249 aa11.48□□□□□ -0.57
LINC00871-204ENST00000556886 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
LINC00871-204ENST00000556886 DCAF1Q9Y4B6 1507 aa11.47□□□□□ -0.57
LINC00871-204ENST00000556886 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
LINC00871-204ENST00000556886 RASA1P20936 1047 aa11.47□□□□□ -0.57
LINC00871-204ENST00000556886 SRPK2P78362 688 aaKnown RBP11.47□□□□□ -0.57
LINC00871-204ENST00000556886 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
LINC00871-204ENST00000556886 ATP1A2P50993 1020 aa11.46□□□□□ -0.57
LINC00871-204ENST00000556886 SCNN1DP51172 638 aa11.46□□□□□ -0.57
LINC00871-204ENST00000556886 CRTC2Q53ET0 693 aaPredicted RBP11.46□□□□□ -0.57
LINC00871-204ENST00000556886 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
LINC00871-204ENST00000556886 ETNK1Q9HBU6 452 aa11.46□□□□□ -0.57
LINC00871-204ENST00000556886 DNAAF2Q9NVR5 837 aaKnown RBP11.46□□□□□ -0.57
LINC00871-204ENST00000556886 GMPR2Q9P2T1 348 aaKnown RBP11.46□□□□□ -0.57
LINC00871-204ENST00000556886 MEN1O00255 615 aa11.45□□□□□ -0.58
LINC00871-204ENST00000556886 ZBTB7BO15156 539 aaPredicted RBP11.45□□□□□ -0.58
LINC00871-204ENST00000556886 IL2RAP01589 272 aa11.45□□□□□ -0.58
LINC00871-204ENST00000556886 CLN3Q13286 438 aa11.45□□□□□ -0.58
LINC00871-204ENST00000556886 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
LINC00871-204ENST00000556886 GDF10P55107 478 aa11.44□□□□□ -0.58
LINC00871-204ENST00000556886 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
LINC00871-204ENST00000556886 PBXIP1Q96AQ6 731 aa11.44□□□□□ -0.58
LINC00871-204ENST00000556886 FAM196BA6NMK8 535 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 TMEM229AB2RXF0 380 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L21D6R901 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 PTK7Q13308 1070 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
LINC00871-204ENST00000556886 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
LINC00871-204ENST00000556886 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
LINC00871-204ENST00000556886 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
LINC00871-204ENST00000556886 ESYT1Q9BSJ8 1104 aa11.42□□□□□ -0.58
LINC00871-204ENST00000556886 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
LINC00871-204ENST00000556886 POTECB2RU33 542 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 DKK1O94907 266 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms