RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 SYTL4Q96C24 671 aaPredicted RBP18.02■□□□□ 0.48
CNOT10-219ENST00000556853 NFAT5O94916 1531 aa18.02■□□□□ 0.47
CNOT10-219ENST00000556853 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.47
CNOT10-219ENST00000556853 ERBB3P21860 1342 aa18.01■□□□□ 0.47
CNOT10-219ENST00000556853 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CNOT10-219ENST00000556853 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
CNOT10-219ENST00000556853 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
CNOT10-219ENST00000556853 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
CNOT10-219ENST00000556853 USP54Q70EL1 1684 aa18■□□□□ 0.47
CNOT10-219ENST00000556853 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
CNOT10-219ENST00000556853 DOT1LQ8TEK3 1739 aa17.99■□□□□ 0.47
CNOT10-219ENST00000556853 SMC1BQ8NDV3 1235 aa17.99■□□□□ 0.47
CNOT10-219ENST00000556853 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
CNOT10-219ENST00000556853 CABP1Q9NZU7 370 aa17.99■□□□□ 0.47
CNOT10-219ENST00000556853 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
CNOT10-219ENST00000556853 C5P01031 1676 aa17.98■□□□□ 0.47
CNOT10-219ENST00000556853 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
CNOT10-219ENST00000556853 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
CNOT10-219ENST00000556853 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
CNOT10-219ENST00000556853 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
CNOT10-219ENST00000556853 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
CNOT10-219ENST00000556853 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
CNOT10-219ENST00000556853 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
CNOT10-219ENST00000556853 BCS1LQ9Y276 419 aa17.95■□□□□ 0.46
CNOT10-219ENST00000556853 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
CNOT10-219ENST00000556853 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
CNOT10-219ENST00000556853 C9orf131Q5VYM1 1079 aa17.94■□□□□ 0.46
CNOT10-219ENST00000556853 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
CNOT10-219ENST00000556853 PRDM10Q9NQV6 1147 aa17.94■□□□□ 0.46
CNOT10-219ENST00000556853 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
CNOT10-219ENST00000556853 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
CNOT10-219ENST00000556853 USP47Q96K76 1375 aa17.93■□□□□ 0.46
CNOT10-219ENST00000556853 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
CNOT10-219ENST00000556853 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
CNOT10-219ENST00000556853 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
CNOT10-219ENST00000556853 KIF13BQ9NQT8 1826 aa17.92■□□□□ 0.46
CNOT10-219ENST00000556853 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
CNOT10-219ENST00000556853 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
CNOT10-219ENST00000556853 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
CNOT10-219ENST00000556853 FOXN1O15353 648 aa17.9■□□□□ 0.46
CNOT10-219ENST00000556853 TGFB2P61812 414 aa17.9■□□□□ 0.46
CNOT10-219ENST00000556853 TTC21AQ8NDW8 1320 aa17.9■□□□□ 0.46
CNOT10-219ENST00000556853 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
CNOT10-219ENST00000556853 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
CNOT10-219ENST00000556853 C4BP0C0L5 1744 aa17.88■□□□□ 0.45
CNOT10-219ENST00000556853 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
CNOT10-219ENST00000556853 KIAA1210Q9ULL0 1709 aa17.87■□□□□ 0.45
CNOT10-219ENST00000556853 MLLT1Q03111 559 aaPredicted RBP17.87■□□□□ 0.45
CNOT10-219ENST00000556853 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
CNOT10-219ENST00000556853 LTN1O94822 1766 aa17.86■□□□□ 0.45
CNOT10-219ENST00000556853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.86■□□□□ 0.45
CNOT10-219ENST00000556853 PHF14O94880 888 aa17.86■□□□□ 0.45
CNOT10-219ENST00000556853 ABHD8Q96I13 439 aa17.86■□□□□ 0.45
CNOT10-219ENST00000556853 AK7Q96M32 723 aa17.86■□□□□ 0.45
CNOT10-219ENST00000556853 FCHSD2O94868 740 aa17.85■□□□□ 0.45
CNOT10-219ENST00000556853 BRCA1P38398 1863 aaKnown RBP17.85■□□□□ 0.45
CNOT10-219ENST00000556853 RGS19P49795 217 aa17.84■□□□□ 0.45
CNOT10-219ENST00000556853 NSD3Q9BZ95 1437 aa17.83■□□□□ 0.45
CNOT10-219ENST00000556853 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
CNOT10-219ENST00000556853 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
CNOT10-219ENST00000556853 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
CNOT10-219ENST00000556853 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
CNOT10-219ENST00000556853 MMP10P09238 476 aa17.82■□□□□ 0.44
CNOT10-219ENST00000556853 DPEP1P16444 411 aa17.82■□□□□ 0.44
CNOT10-219ENST00000556853 SSFA2P28290 1259 aa17.82■□□□□ 0.44
CNOT10-219ENST00000556853 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
CNOT10-219ENST00000556853 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
CNOT10-219ENST00000556853 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
CNOT10-219ENST00000556853 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
CNOT10-219ENST00000556853 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
CNOT10-219ENST00000556853 SBF1O95248 1867 aa17.8■□□□□ 0.44
CNOT10-219ENST00000556853 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
CNOT10-219ENST00000556853 KCNA3P22001 575 aa17.78■□□□□ 0.44
CNOT10-219ENST00000556853 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
CNOT10-219ENST00000556853 NBPF1Q3BBV0 1214 aa17.77■□□□□ 0.44
CNOT10-219ENST00000556853 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
CNOT10-219ENST00000556853 LBX1P52954 281 aa17.76■□□□□ 0.43
CNOT10-219ENST00000556853 AIDAQ96BJ3 306 aa17.76■□□□□ 0.43
CNOT10-219ENST00000556853 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
CNOT10-219ENST00000556853 MEGF6O75095 1541 aa17.75■□□□□ 0.43
CNOT10-219ENST00000556853 ZC3H4Q9UPT8 1303 aaKnown RBP17.74■□□□□ 0.43
CNOT10-219ENST00000556853 IP6K1Q92551 441 aa17.74■□□□□ 0.43
CNOT10-219ENST00000556853 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
CNOT10-219ENST00000556853 GLTPD2A6NH11 291 aa17.73■□□□□ 0.43
CNOT10-219ENST00000556853 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
CNOT10-219ENST00000556853 PIM2Q9P1W9 311 aa17.73■□□□□ 0.43
CNOT10-219ENST00000556853 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
CNOT10-219ENST00000556853 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
CNOT10-219ENST00000556853 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
CNOT10-219ENST00000556853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
CNOT10-219ENST00000556853 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
CNOT10-219ENST00000556853 SMARCC1Q92922 1105 aaPredicted RBP17.72■□□□□ 0.43
CNOT10-219ENST00000556853 CCDC85CA6NKD9 419 aa17.71■□□□□ 0.43
CNOT10-219ENST00000556853 MPRIPQ6WCQ1 1025 aa17.71■□□□□ 0.43
CNOT10-219ENST00000556853 NME9Q86XW9 330 aa17.71■□□□□ 0.43
CNOT10-219ENST00000556853 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
CNOT10-219ENST00000556853 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
CNOT10-219ENST00000556853 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
CNOT10-219ENST00000556853 NLGN1Q8N2Q7 840 aa17.7■□□□□ 0.42
CNOT10-219ENST00000556853 KDM6AO15550 1401 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms