RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
CHD8-211ENST00000556833 USP47Q96K76 1375 aa20.73■□□□□ 0.91
CHD8-211ENST00000556833 LY75O60449 1722 aa20.73■□□□□ 0.91
CHD8-211ENST00000556833 QSER1Q2KHR3 1735 aa20.73■□□□□ 0.91
CHD8-211ENST00000556833 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
CHD8-211ENST00000556833 CHD4Q14839 1912 aa20.72■□□□□ 0.91
CHD8-211ENST00000556833 NSD2O96028 1365 aa20.72■□□□□ 0.91
CHD8-211ENST00000556833 NBPF6Q5VWK0 638 aa20.71■□□□□ 0.91
CHD8-211ENST00000556833 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
CHD8-211ENST00000556833 NBPF4Q96M43 638 aa20.71■□□□□ 0.91
CHD8-211ENST00000556833 FYB1O15117 783 aa20.7■□□□□ 0.9
CHD8-211ENST00000556833 TMF1P82094 1093 aa20.7■□□□□ 0.9
CHD8-211ENST00000556833 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
CHD8-211ENST00000556833 PNPLA7Q6ZV29 1317 aa20.7■□□□□ 0.9
CHD8-211ENST00000556833 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
CHD8-211ENST00000556833 RTL1A6NKG5 1358 aa20.69■□□□□ 0.9
CHD8-211ENST00000556833 MSH5O43196 834 aa20.68■□□□□ 0.9
CHD8-211ENST00000556833 SLC27A3Q5K4L6 730 aa20.68■□□□□ 0.9
CHD8-211ENST00000556833 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
CHD8-211ENST00000556833 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
CHD8-211ENST00000556833 HSP90AB2PQ58FF8 381 aa20.66■□□□□ 0.9
CHD8-211ENST00000556833 ZNF784Q8NCA9 323 aaPredicted RBP20.66■□□□□ 0.9
CHD8-211ENST00000556833 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
CHD8-211ENST00000556833 C5P01031 1676 aa20.64■□□□□ 0.9
CHD8-211ENST00000556833 POLD1P28340 1107 aa20.64■□□□□ 0.89
CHD8-211ENST00000556833 GPR162Q16538 588 aa20.64■□□□□ 0.89
CHD8-211ENST00000556833 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
CHD8-211ENST00000556833 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
CHD8-211ENST00000556833 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
CHD8-211ENST00000556833 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
CHD8-211ENST00000556833 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
CHD8-211ENST00000556833 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
CHD8-211ENST00000556833 NLGN2Q8NFZ4 835 aa20.62■□□□□ 0.89
CHD8-211ENST00000556833 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
CHD8-211ENST00000556833 ITGB4P16144 1822 aa20.62■□□□□ 0.89
CHD8-211ENST00000556833 GOLGB1Q14789 3259 aaKnown RBP20.61■□□□□ 0.89
CHD8-211ENST00000556833 FLT4P35916 1363 aa20.6■□□□□ 0.89
CHD8-211ENST00000556833 TAF1LQ8IZX4 1826 aa20.6■□□□□ 0.89
CHD8-211ENST00000556833 SLC24A1O60721 1099 aa20.6■□□□□ 0.89
CHD8-211ENST00000556833 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
CHD8-211ENST00000556833 POLR3GLQ9BT43 218 aa20.6■□□□□ 0.89
CHD8-211ENST00000556833 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
CHD8-211ENST00000556833 INSRP06213 1382 aa20.59■□□□□ 0.89
CHD8-211ENST00000556833 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
CHD8-211ENST00000556833 MPRIPQ6WCQ1 1025 aa20.59■□□□□ 0.89
CHD8-211ENST00000556833 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
CHD8-211ENST00000556833 SLC16A10Q8TF71 515 aa20.59■□□□□ 0.89
CHD8-211ENST00000556833 PCDH11XQ9BZA7 1347 aa20.58■□□□□ 0.89
CHD8-211ENST00000556833 PCDH11YQ9BZA8 1340 aa20.58■□□□□ 0.89
CHD8-211ENST00000556833 MAP2P11137 1827 aaKnown RBP20.58■□□□□ 0.89
CHD8-211ENST00000556833 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
CHD8-211ENST00000556833 SMIM5Q71RC9 77 aa20.56■□□□□ 0.88
CHD8-211ENST00000556833 PALLDQ8WX93 1383 aa20.56■□□□□ 0.88
CHD8-211ENST00000556833 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
CHD8-211ENST00000556833 CYP27B1O15528 508 aa20.55■□□□□ 0.88
CHD8-211ENST00000556833 CDCA8Q53HL2 280 aa20.55■□□□□ 0.88
CHD8-211ENST00000556833 ANKRD26Q9UPS8 1709 aa20.54■□□□□ 0.88
CHD8-211ENST00000556833 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
CHD8-211ENST00000556833 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
CHD8-211ENST00000556833 PHF14O94880 888 aa20.51■□□□□ 0.87
CHD8-211ENST00000556833 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
CHD8-211ENST00000556833 YBX3P16989 372 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHD8-211ENST00000556833 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
CHD8-211ENST00000556833 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
CHD8-211ENST00000556833 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
CHD8-211ENST00000556833 KIF24Q5T7B8 1368 aa20.48■□□□□ 0.87
CHD8-211ENST00000556833 SENP3-EIF4A1A0A087X0R7 540 aa20.48■□□□□ 0.87
CHD8-211ENST00000556833 PIGBQ92521 554 aa20.48■□□□□ 0.87
CHD8-211ENST00000556833 AK7Q96M32 723 aa20.48■□□□□ 0.87
CHD8-211ENST00000556833 EYA1Q99502 592 aa20.47■□□□□ 0.87
CHD8-211ENST00000556833 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
CHD8-211ENST00000556833 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
CHD8-211ENST00000556833 C1QTNF8P60827 252 aa20.44■□□□□ 0.86
CHD8-211ENST00000556833 POLKQ9UBT6 870 aa20.44■□□□□ 0.86
CHD8-211ENST00000556833 LINC00116Q8NCU8 138 aa20.43■□□□□ 0.86
CHD8-211ENST00000556833 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
CHD8-211ENST00000556833 ASAP1Q9ULH1 1129 aa20.43■□□□□ 0.86
CHD8-211ENST00000556833 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
CHD8-211ENST00000556833 TMOD3Q9NYL9 352 aa20.42■□□□□ 0.86
CHD8-211ENST00000556833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
CHD8-211ENST00000556833 LOC102724428A0A0B4J2F2 783 aa20.41■□□□□ 0.86
CHD8-211ENST00000556833 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
CHD8-211ENST00000556833 SIK1P57059 783 aa20.41■□□□□ 0.86
CHD8-211ENST00000556833 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
CHD8-211ENST00000556833 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
CHD8-211ENST00000556833 PHKG2P15735 406 aa20.39■□□□□ 0.85
CHD8-211ENST00000556833 ITPK1Q13572 414 aa20.39■□□□□ 0.85
CHD8-211ENST00000556833 NKX1-1Q15270 411 aaPredicted RBP20.39■□□□□ 0.85
CHD8-211ENST00000556833 GNPATO15228 680 aa20.38■□□□□ 0.85
CHD8-211ENST00000556833 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
CHD8-211ENST00000556833 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
CHD8-211ENST00000556833 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
CHD8-211ENST00000556833 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
CHD8-211ENST00000556833 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
CHD8-211ENST00000556833 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
CHD8-211ENST00000556833 ATP10DQ9P241 1426 aa20.36■□□□□ 0.85
CHD8-211ENST00000556833 IGSF1Q8N6C5 1336 aa20.35■□□□□ 0.85
CHD8-211ENST00000556833 PANK3Q9H999 370 aa20.35■□□□□ 0.85
CHD8-211ENST00000556833 ATG3Q9NT62 314 aa20.35■□□□□ 0.85
CHD8-211ENST00000556833 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms