RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
RCCD1-207ENST00000556774 KCNQ4P56696 695 aa22.25■■□□□ 1.15
RCCD1-207ENST00000556774 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
RCCD1-207ENST00000556774 AMPHP49418 695 aa22.24■■□□□ 1.15
RCCD1-207ENST00000556774 PNPLA7Q6ZV29 1317 aa22.24■■□□□ 1.15
RCCD1-207ENST00000556774 KIF20BQ96Q89 1820 aa22.23■■□□□ 1.15
RCCD1-207ENST00000556774 PRIM1P49642 420 aaKnown RBP22.23■■□□□ 1.15
RCCD1-207ENST00000556774 KLHL34Q8N239 644 aa22.22■■□□□ 1.15
RCCD1-207ENST00000556774 RTL1A6NKG5 1358 aa22.22■■□□□ 1.15
RCCD1-207ENST00000556774 GOLGB1Q14789 3259 aaKnown RBP22.21■■□□□ 1.15
RCCD1-207ENST00000556774 ZCRB1Q8TBF4 217 aaKnown RBP22.2■■□□□ 1.14
RCCD1-207ENST00000556774 SLC16A10Q8TF71 515 aa22.2■■□□□ 1.14
RCCD1-207ENST00000556774 TFCP2L1Q9NZI6 479 aa22.2■■□□□ 1.14
RCCD1-207ENST00000556774 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
RCCD1-207ENST00000556774 C5P01031 1676 aa22.18■■□□□ 1.14
RCCD1-207ENST00000556774 POLD1P28340 1107 aa22.18■■□□□ 1.14
RCCD1-207ENST00000556774 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
RCCD1-207ENST00000556774 GPR162Q16538 588 aa22.17■■□□□ 1.14
RCCD1-207ENST00000556774 SMG6Q86US8 1419 aaKnown RBP22.16■■□□□ 1.14
RCCD1-207ENST00000556774 NBPF6Q5VWK0 638 aa22.16■■□□□ 1.14
RCCD1-207ENST00000556774 NBPF4Q96M43 638 aa22.16■■□□□ 1.14
RCCD1-207ENST00000556774 GGNBP2Q9H3C7 697 aa22.16■■□□□ 1.14
RCCD1-207ENST00000556774 CCNL1Q9UK58 526 aaPredicted RBP22.16■■□□□ 1.14
RCCD1-207ENST00000556774 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
RCCD1-207ENST00000556774 TAF1LQ8IZX4 1826 aa22.14■■□□□ 1.13
RCCD1-207ENST00000556774 USP47Q96K76 1375 aa22.13■■□□□ 1.13
RCCD1-207ENST00000556774 FYB1O15117 783 aa22.13■■□□□ 1.13
RCCD1-207ENST00000556774 NLGN2Q8NFZ4 835 aa22.13■■□□□ 1.13
RCCD1-207ENST00000556774 TOGARAM1Q9Y4F4 1720 aa22.13■■□□□ 1.13
RCCD1-207ENST00000556774 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
RCCD1-207ENST00000556774 ITGB4P16144 1822 aa22.11■■□□□ 1.13
RCCD1-207ENST00000556774 RAPGEF4Q8WZA2 1011 aa22.11■■□□□ 1.13
RCCD1-207ENST00000556774 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
RCCD1-207ENST00000556774 MSH5O43196 834 aa22.1■■□□□ 1.13
RCCD1-207ENST00000556774 TMF1P82094 1093 aa22.1■■□□□ 1.13
RCCD1-207ENST00000556774 PKD1L3Q7Z443 1732 aa22.1■■□□□ 1.13
RCCD1-207ENST00000556774 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
RCCD1-207ENST00000556774 COL23A1Q86Y22 540 aaPredicted RBP22.09■■□□□ 1.13
RCCD1-207ENST00000556774 INSRP06213 1382 aa22.09■■□□□ 1.13
RCCD1-207ENST00000556774 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
RCCD1-207ENST00000556774 MSL1Q68DK7 614 aa22.08■■□□□ 1.13
RCCD1-207ENST00000556774 FLT4P35916 1363 aa22.08■■□□□ 1.12
RCCD1-207ENST00000556774 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
RCCD1-207ENST00000556774 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
RCCD1-207ENST00000556774 SENP3-EIF4A1A0A087X0R7 540 aa22.07■■□□□ 1.12
RCCD1-207ENST00000556774 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
RCCD1-207ENST00000556774 C1QTNF8P60827 252 aa22.06■■□□□ 1.12
RCCD1-207ENST00000556774 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
RCCD1-207ENST00000556774 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
RCCD1-207ENST00000556774 KIF24Q5T7B8 1368 aa22.04■■□□□ 1.12
RCCD1-207ENST00000556774 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
RCCD1-207ENST00000556774 NSD3Q9BZ95 1437 aa22.03■■□□□ 1.12
RCCD1-207ENST00000556774 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
RCCD1-207ENST00000556774 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
RCCD1-207ENST00000556774 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
RCCD1-207ENST00000556774 CYP27B1O15528 508 aa22.01■■□□□ 1.11
RCCD1-207ENST00000556774 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
RCCD1-207ENST00000556774 MAP2P11137 1827 aaKnown RBP22■■□□□ 1.11
RCCD1-207ENST00000556774 NCAPD2Q15021 1401 aa21.99■■□□□ 1.11
RCCD1-207ENST00000556774 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
RCCD1-207ENST00000556774 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
RCCD1-207ENST00000556774 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
RCCD1-207ENST00000556774 GRIN3BO60391 1043 aa21.96■■□□□ 1.11
RCCD1-207ENST00000556774 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
RCCD1-207ENST00000556774 FLAD1Q8NFF5 587 aa21.95■■□□□ 1.1
RCCD1-207ENST00000556774 AK7Q96M32 723 aa21.95■■□□□ 1.1
RCCD1-207ENST00000556774 PHF14O94880 888 aa21.94■■□□□ 1.1
RCCD1-207ENST00000556774 PIGBQ92521 554 aa21.94■■□□□ 1.1
RCCD1-207ENST00000556774 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
RCCD1-207ENST00000556774 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
RCCD1-207ENST00000556774 CD2APQ9Y5K6 639 aa21.93■■□□□ 1.1
RCCD1-207ENST00000556774 ATP10DQ9P241 1426 aa21.92■■□□□ 1.1
RCCD1-207ENST00000556774 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
RCCD1-207ENST00000556774 SPG7Q9UQ90 795 aa21.91■■□□□ 1.1
RCCD1-207ENST00000556774 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
RCCD1-207ENST00000556774 WASHC2AQ641Q2 1341 aa21.89■■□□□ 1.1
RCCD1-207ENST00000556774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.89■■□□□ 1.09
RCCD1-207ENST00000556774 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
RCCD1-207ENST00000556774 EYA1Q99502 592 aa21.89■■□□□ 1.09
RCCD1-207ENST00000556774 CEP350Q5VT06 3117 aa21.89■■□□□ 1.09
RCCD1-207ENST00000556774 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
RCCD1-207ENST00000556774 SIK1P57059 783 aa21.88■■□□□ 1.09
RCCD1-207ENST00000556774 TMOD3Q9NYL9 352 aa21.87■■□□□ 1.09
RCCD1-207ENST00000556774 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
RCCD1-207ENST00000556774 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
RCCD1-207ENST00000556774 SSFA2P28290 1259 aa21.86■■□□□ 1.09
RCCD1-207ENST00000556774 ADCY9O60503 1353 aa21.86■■□□□ 1.09
RCCD1-207ENST00000556774 ITPK1Q13572 414 aa21.85■■□□□ 1.09
RCCD1-207ENST00000556774 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
RCCD1-207ENST00000556774 ASAP1Q9ULH1 1129 aa21.85■■□□□ 1.09
RCCD1-207ENST00000556774 GNPATO15228 680 aa21.84■■□□□ 1.09
RCCD1-207ENST00000556774 PHKG2P15735 406 aa21.84■■□□□ 1.09
RCCD1-207ENST00000556774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.84■■□□□ 1.091e-8■■□□□ 11.4
RCCD1-207ENST00000556774 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
RCCD1-207ENST00000556774 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.08
RCCD1-207ENST00000556774 TNNT2P45379 298 aaPredicted RBP21.82■■□□□ 1.08
RCCD1-207ENST00000556774 EIF4A2Q14240 407 aaKnown RBP21.82■■□□□ 1.08
RCCD1-207ENST00000556774 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
RCCD1-207ENST00000556774 POLR3GLQ9BT43 218 aa21.82■■□□□ 1.08
RCCD1-207ENST00000556774 COL5A3P25940 1745 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms