RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 NHSQ6T4R5 1651 aa18.19■□□□□ 0.5
SRP54-AS1-204ENST00000556705 PLSCR1O15162 318 aa18.19■□□□□ 0.5
SRP54-AS1-204ENST00000556705 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
SRP54-AS1-204ENST00000556705 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
SRP54-AS1-204ENST00000556705 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
SRP54-AS1-204ENST00000556705 R3HDM1Q15032 1099 aaKnown RBP18.18■□□□□ 0.5
SRP54-AS1-204ENST00000556705 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
SRP54-AS1-204ENST00000556705 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
SRP54-AS1-204ENST00000556705 BTAF1O14981 1849 aa18.16■□□□□ 0.5
SRP54-AS1-204ENST00000556705 NSD2O96028 1365 aa18.16■□□□□ 0.5
SRP54-AS1-204ENST00000556705 PROM2Q8N271 834 aa18.15■□□□□ 0.5
SRP54-AS1-204ENST00000556705 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
SRP54-AS1-204ENST00000556705 TATP17735 454 aaPredicted RBP18.14■□□□□ 0.49
SRP54-AS1-204ENST00000556705 MORC1Q86VD1 984 aa18.14■□□□□ 0.49
SRP54-AS1-204ENST00000556705 AMER1Q5JTC6 1135 aaPredicted RBP18.13■□□□□ 0.49
SRP54-AS1-204ENST00000556705 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
SRP54-AS1-204ENST00000556705 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
SRP54-AS1-204ENST00000556705 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
SRP54-AS1-204ENST00000556705 EYA1Q99502 592 aa18.12■□□□□ 0.49
SRP54-AS1-204ENST00000556705 NCAPD2Q15021 1401 aa18.12■□□□□ 0.49
SRP54-AS1-204ENST00000556705 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
SRP54-AS1-204ENST00000556705 TXNRD1Q16881 649 aa18.11■□□□□ 0.49
SRP54-AS1-204ENST00000556705 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
SRP54-AS1-204ENST00000556705 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
SRP54-AS1-204ENST00000556705 LRP5O75197 1615 aa18.09■□□□□ 0.49
SRP54-AS1-204ENST00000556705 PRIM1P49642 420 aaKnown RBP18.08■□□□□ 0.48
SRP54-AS1-204ENST00000556705 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
SRP54-AS1-204ENST00000556705 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
SRP54-AS1-204ENST00000556705 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
SRP54-AS1-204ENST00000556705 CYP27B1O15528 508 aa18.06■□□□□ 0.48
SRP54-AS1-204ENST00000556705 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
SRP54-AS1-204ENST00000556705 ITGB4P16144 1822 aa18.05■□□□□ 0.48
SRP54-AS1-204ENST00000556705 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
SRP54-AS1-204ENST00000556705 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
SRP54-AS1-204ENST00000556705 LRRC4BQ9NT99 713 aa18.03■□□□□ 0.48
SRP54-AS1-204ENST00000556705 LY75O60449 1722 aa18.03■□□□□ 0.48
SRP54-AS1-204ENST00000556705 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
SRP54-AS1-204ENST00000556705 SPG7Q9UQ90 795 aa18.02■□□□□ 0.48
SRP54-AS1-204ENST00000556705 MTHFSP49914 203 aa18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 STK32BQ9NY57 414 aa18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.471e-12■□□□□ 8.4
SRP54-AS1-204ENST00000556705 CASZ1Q86V15 1759 aa18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
SRP54-AS1-204ENST00000556705 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
SRP54-AS1-204ENST00000556705 IL13P35225 146 aa17.99■□□□□ 0.47
SRP54-AS1-204ENST00000556705 KCNQ4P56696 695 aa17.99■□□□□ 0.47
SRP54-AS1-204ENST00000556705 NKX1-1Q15270 411 aaPredicted RBP17.99■□□□□ 0.47
SRP54-AS1-204ENST00000556705 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
SRP54-AS1-204ENST00000556705 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
SRP54-AS1-204ENST00000556705 PHKG2P15735 406 aa17.97■□□□□ 0.47
SRP54-AS1-204ENST00000556705 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
SRP54-AS1-204ENST00000556705 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
SRP54-AS1-204ENST00000556705 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
SRP54-AS1-204ENST00000556705 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
SRP54-AS1-204ENST00000556705 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
SRP54-AS1-204ENST00000556705 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
SRP54-AS1-204ENST00000556705 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
SRP54-AS1-204ENST00000556705 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
SRP54-AS1-204ENST00000556705 PIGBQ92521 554 aa17.94■□□□□ 0.46
SRP54-AS1-204ENST00000556705 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
SRP54-AS1-204ENST00000556705 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
SRP54-AS1-204ENST00000556705 CCNL1Q9UK58 526 aaPredicted RBP17.93■□□□□ 0.46
SRP54-AS1-204ENST00000556705 KDRP35968 1356 aa17.92■□□□□ 0.46
SRP54-AS1-204ENST00000556705 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
SRP54-AS1-204ENST00000556705 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
SRP54-AS1-204ENST00000556705 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
SRP54-AS1-204ENST00000556705 AMOTQ4VCS5 1084 aa17.91■□□□□ 0.46
SRP54-AS1-204ENST00000556705 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
SRP54-AS1-204ENST00000556705 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
SRP54-AS1-204ENST00000556705 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
SRP54-AS1-204ENST00000556705 HMOX1P09601 288 aa17.9■□□□□ 0.46
SRP54-AS1-204ENST00000556705 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
SRP54-AS1-204ENST00000556705 C5P01031 1676 aa17.9■□□□□ 0.46
SRP54-AS1-204ENST00000556705 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
SRP54-AS1-204ENST00000556705 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
SRP54-AS1-204ENST00000556705 SMARCC1Q92922 1105 aaPredicted RBP17.89■□□□□ 0.45
SRP54-AS1-204ENST00000556705 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
SRP54-AS1-204ENST00000556705 ASAP1Q9ULH1 1129 aa17.88■□□□□ 0.45
SRP54-AS1-204ENST00000556705 PNPLA7Q6ZV29 1317 aa17.88■□□□□ 0.45
SRP54-AS1-204ENST00000556705 HSP90AB1P08238 724 aaKnown RBP17.87■□□□□ 0.45
SRP54-AS1-204ENST00000556705 PTGER2P43116 358 aa17.87■□□□□ 0.45
SRP54-AS1-204ENST00000556705 DCAF5Q96JK2 942 aa17.87■□□□□ 0.45
SRP54-AS1-204ENST00000556705 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
SRP54-AS1-204ENST00000556705 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
SRP54-AS1-204ENST00000556705 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 ERVV-2B6SEH9 535 aa17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
SRP54-AS1-204ENST00000556705 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
SRP54-AS1-204ENST00000556705 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
SRP54-AS1-204ENST00000556705 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
SRP54-AS1-204ENST00000556705 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.44
SRP54-AS1-204ENST00000556705 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
SRP54-AS1-204ENST00000556705 SIK1P57059 783 aa17.83■□□□□ 0.44
SRP54-AS1-204ENST00000556705 COL24A1Q17RW2 1714 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms