RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 USP17L24Q0WX57 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 ARXQ96QS3 562 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 ZMIZ1Q9ULJ6 1067 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 LGR5O75473 907 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 ZIC2O95409 532 aaPredicted RBP8.71□□□□□ -1.02
PCNX1-212ENST00000556516 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.02
PCNX1-212ENST00000556516 ERVK-9P63128 1117 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PRR20EP86478 221 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PRR20CP86479 221 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PRR20DP86480 221 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PRR20BP86481 221 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PRR20AP86496 221 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 PSME1Q06323 249 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
PCNX1-212ENST00000556516 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.02
PCNX1-212ENST00000556516 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
PCNX1-212ENST00000556516 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
PCNX1-212ENST00000556516 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
PCNX1-212ENST00000556516 MYCP01106 439 aaPredicted RBP8.7□□□□□ -1.02
PCNX1-212ENST00000556516 USP4Q13107 963 aa8.7□□□□□ -1.02
PCNX1-212ENST00000556516 NOVA2Q9UNW9 492 aaKnown RBP8.7□□□□□ -1.02
PCNX1-212ENST00000556516 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
PCNX1-212ENST00000556516 TIMP2P16035 220 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 MYT1Q01538 1121 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 PTK7Q13308 1070 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 LARP1Q6PKG0 1096 aaKnown RBP8.69□□□□□ -1.02
PCNX1-212ENST00000556516 TPCN2Q8NHX9 752 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 KLF16Q9BXK1 252 aaPredicted RBP8.69□□□□□ -1.02
PCNX1-212ENST00000556516 RAB6BQ9NRW1 208 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
PCNX1-212ENST00000556516 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 EMILIN1Q9Y6C2 1016 aa8.69□□□□□ -1.02
PCNX1-212ENST00000556516 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
PCNX1-212ENST00000556516 ATG7O95352 703 aa8.68□□□□□ -1.02
PCNX1-212ENST00000556516 ESF1Q9H501 851 aaKnown RBP8.68□□□□□ -1.02
PCNX1-212ENST00000556516 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
PCNX1-212ENST00000556516 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
PCNX1-212ENST00000556516 SFI1A8K8P3 1242 aa8.67□□□□□ -1.02
PCNX1-212ENST00000556516 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
PCNX1-212ENST00000556516 DPYDQ12882 1025 aa8.67□□□□□ -1.02
PCNX1-212ENST00000556516 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
PCNX1-212ENST00000556516 TRIM50Q86XT4 487 aa8.67□□□□□ -1.02
PCNX1-212ENST00000556516 RGS20O76081 388 aa8.66□□□□□ -1.02
PCNX1-212ENST00000556516 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
PCNX1-212ENST00000556516 GFRA3O60609 400 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 DKK1O94907 266 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 RELBQ01201 579 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 KDF1Q8NAX2 398 aaPredicted RBP8.65□□□□□ -1.02
PCNX1-212ENST00000556516 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
PCNX1-212ENST00000556516 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 ARHGEF10LQ9HCE6 1279 aa8.65□□□□□ -1.02
PCNX1-212ENST00000556516 SCNN1DP51172 638 aa8.64□□□□□ -1.03
PCNX1-212ENST00000556516 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
PCNX1-212ENST00000556516 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
PCNX1-212ENST00000556516 ETNK1Q9HBU6 452 aa8.64□□□□□ -1.03
PCNX1-212ENST00000556516 SERTAD1Q9UHV2 236 aa8.64□□□□□ -1.03
PCNX1-212ENST00000556516 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
PCNX1-212ENST00000556516 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
PCNX1-212ENST00000556516 ADH1AP07327 375 aa8.63□□□□□ -1.03
PCNX1-212ENST00000556516 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
PCNX1-212ENST00000556516 FAM200AQ8TCP9 573 aa8.63□□□□□ -1.03
PCNX1-212ENST00000556516 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
PCNX1-212ENST00000556516 BMP1P13497 986 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 GDF10P55107 478 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 SIX5Q8N196 739 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 TSEN2Q8NCE0 465 aaKnown RBP8.62□□□□□ -1.03
PCNX1-212ENST00000556516 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
PCNX1-212ENST00000556516 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
PCNX1-212ENST00000556516 Q6ZVU0 165 aa8.61□□□□□ -1.03
PCNX1-212ENST00000556516 MEN1O00255 615 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 IL2RAP01589 272 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 FAM69CQ0P6D2 419 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 PKDCCQ504Y2 493 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
PCNX1-212ENST00000556516 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
PCNX1-212ENST00000556516 ST8SIA5O15466 376 aa8.59□□□□□ -1.03
PCNX1-212ENST00000556516 SEC13P55735 322 aa8.59□□□□□ -1.03
PCNX1-212ENST00000556516 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
PCNX1-212ENST00000556516 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
PCNX1-212ENST00000556516 NRG2O14511 850 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-212ENST00000556516 INHAP05111 366 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
PCNX1-212ENST00000556516 SCNN1AP37088 669 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 PTGIRP43119 386 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 PRIMPOLQ96LW4 560 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-212ENST00000556516 HINFPQ9BQA5 517 aa8.58□□□□□ -1.04
PCNX1-212ENST00000556516 PRMT3O60678 531 aa8.57□□□□□ -1.04
PCNX1-212ENST00000556516 GNRH1P01148 92 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms