RNA–Protein interactions for RNA: ENST00000556408.5

SIPA1L1-213, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 903 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-213ENST00000556408 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
SIPA1L1-213ENST00000556408 IL2RBP14784 551 aa13.79□□□□□ -0.2
SIPA1L1-213ENST00000556408 JMYQ8N9B5 988 aa13.79□□□□□ -0.2
SIPA1L1-213ENST00000556408 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 WWC3Q9ULE0 1092 aa13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 IGSF1Q8N6C5 1336 aa13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
SIPA1L1-213ENST00000556408 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
SIPA1L1-213ENST00000556408 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
SIPA1L1-213ENST00000556408 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
SIPA1L1-213ENST00000556408 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
SIPA1L1-213ENST00000556408 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
SIPA1L1-213ENST00000556408 KCNQ4P56696 695 aa13.76□□□□□ -0.21
SIPA1L1-213ENST00000556408 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
SIPA1L1-213ENST00000556408 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
SIPA1L1-213ENST00000556408 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
SIPA1L1-213ENST00000556408 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
SIPA1L1-213ENST00000556408 ERBB3P21860 1342 aa13.74□□□□□ -0.21
SIPA1L1-213ENST00000556408 C4BP0C0L5 1744 aa13.74□□□□□ -0.21
SIPA1L1-213ENST00000556408 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
SIPA1L1-213ENST00000556408 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
SIPA1L1-213ENST00000556408 HTRA3P83110 453 aa13.73□□□□□ -0.21
SIPA1L1-213ENST00000556408 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
SIPA1L1-213ENST00000556408 KIAA1551Q9HCM1 1747 aa13.73□□□□□ -0.21
SIPA1L1-213ENST00000556408 ITGB4P16144 1822 aa13.72□□□□□ -0.21
SIPA1L1-213ENST00000556408 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
SIPA1L1-213ENST00000556408 FSTL1Q12841 308 aa13.72□□□□□ -0.21
SIPA1L1-213ENST00000556408 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
SIPA1L1-213ENST00000556408 SBF1O95248 1867 aa13.72□□□□□ -0.21
SIPA1L1-213ENST00000556408 USP47Q96K76 1375 aa13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
SIPA1L1-213ENST00000556408 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.22
SIPA1L1-213ENST00000556408 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
SIPA1L1-213ENST00000556408 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
SIPA1L1-213ENST00000556408 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
SIPA1L1-213ENST00000556408 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
SIPA1L1-213ENST00000556408 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
SIPA1L1-213ENST00000556408 NSD2O96028 1365 aa13.69□□□□□ -0.22
SIPA1L1-213ENST00000556408 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
SIPA1L1-213ENST00000556408 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
SIPA1L1-213ENST00000556408 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
SIPA1L1-213ENST00000556408 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
SIPA1L1-213ENST00000556408 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
SIPA1L1-213ENST00000556408 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
SIPA1L1-213ENST00000556408 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
SIPA1L1-213ENST00000556408 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
SIPA1L1-213ENST00000556408 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
SIPA1L1-213ENST00000556408 AK7Q96M32 723 aa13.64□□□□□ -0.23
SIPA1L1-213ENST00000556408 PXDNLA1KZ92 1463 aa13.63□□□□□ -0.23
SIPA1L1-213ENST00000556408 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
SIPA1L1-213ENST00000556408 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
SIPA1L1-213ENST00000556408 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
SIPA1L1-213ENST00000556408 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
SIPA1L1-213ENST00000556408 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
SIPA1L1-213ENST00000556408 PHF14O94880 888 aa13.61□□□□□ -0.23
SIPA1L1-213ENST00000556408 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
SIPA1L1-213ENST00000556408 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
SIPA1L1-213ENST00000556408 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
SIPA1L1-213ENST00000556408 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
SIPA1L1-213ENST00000556408 C9orf131Q5VYM1 1079 aa13.58□□□□□ -0.24
SIPA1L1-213ENST00000556408 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
SIPA1L1-213ENST00000556408 MEGF6O75095 1541 aa13.58□□□□□ -0.24
SIPA1L1-213ENST00000556408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
SIPA1L1-213ENST00000556408 FCHSD2O94868 740 aa13.57□□□□□ -0.24
SIPA1L1-213ENST00000556408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIPA1L1-213ENST00000556408 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
SIPA1L1-213ENST00000556408 SSFA2P28290 1259 aa13.56□□□□□ -0.24
SIPA1L1-213ENST00000556408 TGFB2P61812 414 aa13.56□□□□□ -0.24
SIPA1L1-213ENST00000556408 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
SIPA1L1-213ENST00000556408 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
SIPA1L1-213ENST00000556408 NBPF1Q3BBV0 1214 aa13.55□□□□□ -0.24
SIPA1L1-213ENST00000556408 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
SIPA1L1-213ENST00000556408 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
SIPA1L1-213ENST00000556408 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SIPA1L1-213ENST00000556408 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
SIPA1L1-213ENST00000556408 DICER1Q9UPY3 1922 aaKnown RBP13.54□□□□□ -0.24
SIPA1L1-213ENST00000556408 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
SIPA1L1-213ENST00000556408 MMP10P09238 476 aa13.53□□□□□ -0.24
SIPA1L1-213ENST00000556408 NME9Q86XW9 330 aa13.53□□□□□ -0.24
SIPA1L1-213ENST00000556408 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
SIPA1L1-213ENST00000556408 RAB3GAP2Q9H2M9 1393 aa13.53□□□□□ -0.24
SIPA1L1-213ENST00000556408 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
SIPA1L1-213ENST00000556408 IP6K1Q92551 441 aa13.52□□□□□ -0.25
SIPA1L1-213ENST00000556408 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
SIPA1L1-213ENST00000556408 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
SIPA1L1-213ENST00000556408 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
SIPA1L1-213ENST00000556408 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
SIPA1L1-213ENST00000556408 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
SIPA1L1-213ENST00000556408 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
SIPA1L1-213ENST00000556408 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
SIPA1L1-213ENST00000556408 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
SIPA1L1-213ENST00000556408 COL5A3P25940 1745 aaPredicted RBP13.5□□□□□ -0.25
SIPA1L1-213ENST00000556408 EDC4Q6P2E9 1401 aaKnown RBP13.5□□□□□ -0.25
SIPA1L1-213ENST00000556408 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms