RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 PRICKLE2Q7Z3G6 844 aa7.22□□□□□ -1.25
ATXN3-240ENST00000556339 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
ATXN3-240ENST00000556339 SMARCA4P51532 1647 aa7.21□□□□□ -1.26
ATXN3-240ENST00000556339 ATP5J2-PTCD1G3V325 749 aa7.21□□□□□ -1.26
ATXN3-240ENST00000556339 LILRA1O75019 489 aa7.21□□□□□ -1.26
ATXN3-240ENST00000556339 FOXD4L5Q5VV16 416 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-240ENST00000556339 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
ATXN3-240ENST00000556339 ESF1Q9H501 851 aaKnown RBP7.21□□□□□ -1.26
ATXN3-240ENST00000556339 BAZ1BQ9UIG0 1483 aaKnown RBP7.21□□□□□ -1.26
ATXN3-240ENST00000556339 ESPNB1AK53 854 aa7.2□□□□□ -1.26
ATXN3-240ENST00000556339 RHOQP17081 205 aa7.2□□□□□ -1.26
ATXN3-240ENST00000556339 MARSP56192 900 aaKnown RBP7.2□□□□□ -1.26
ATXN3-240ENST00000556339 MAP3K10Q02779 954 aa7.2□□□□□ -1.26
ATXN3-240ENST00000556339 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-240ENST00000556339 CUX2O14529 1486 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 GDF11O95390 407 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 RNF20Q5VTR2 975 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 ZNF385CQ66K41 422 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-240ENST00000556339 RIPOR1Q6ZS17 1223 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 KCTD17Q8N5Z5 321 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 IL27Q8NEV9 243 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 ZNF592Q92610 1267 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 NLRP3Q96P20 1036 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 GOPCQ9HD26 462 aa7.19□□□□□ -1.26
ATXN3-240ENST00000556339 ZNF330Q9Y3S2 320 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-240ENST00000556339 SENP3-EIF4A1A0A087X0R7 540 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 GIGYF1O75420 1035 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-240ENST00000556339 FBXO45P0C2W1 286 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 RASSF7Q02833 373 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 SLC27A3Q5K4L6 730 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 FOXR1Q6PIV2 292 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 NESP48681 1621 aa7.18□□□□□ -1.26
ATXN3-240ENST00000556339 ADAMTS2O95450 1211 aa7.17□□□□□ -1.26
ATXN3-240ENST00000556339 HMGXB3Q12766 1538 aa7.17□□□□□ -1.26
ATXN3-240ENST00000556339 SLURP2P0DP57 97 aa7.16□□□□□ -1.26
ATXN3-240ENST00000556339 RNF144AP50876 292 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-240ENST00000556339 CC2D2BQ6DHV5 1058 aa7.16□□□□□ -1.26
ATXN3-240ENST00000556339 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
ATXN3-240ENST00000556339 KDF1Q8NAX2 398 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-240ENST00000556339 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
ATXN3-240ENST00000556339 GAS2L1Q99501 681 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-240ENST00000556339 IRS1P35568 1242 aa7.15□□□□□ -1.26
ATXN3-240ENST00000556339 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.26
ATXN3-240ENST00000556339 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
ATXN3-240ENST00000556339 MROH2BQ7Z745 1585 aa7.15□□□□□ -1.27
ATXN3-240ENST00000556339 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
ATXN3-240ENST00000556339 APBB1O00213 710 aa7.14□□□□□ -1.27
ATXN3-240ENST00000556339 GPC1P35052 558 aa7.14□□□□□ -1.27
ATXN3-240ENST00000556339 MCCD1P59942 119 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-240ENST00000556339 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
ATXN3-240ENST00000556339 SCARF2Q96GP6 870 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-240ENST00000556339 ENAMQ9NRM1 1142 aa7.14□□□□□ -1.27
ATXN3-240ENST00000556339 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 H7C1W4 665 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 GPR25O00155 361 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 NR1H3Q13133 447 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 GMCL1Q96IK5 515 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 GJD4Q96KN9 370 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-240ENST00000556339 TRERF1Q96PN7 1200 aa7.13□□□□□ -1.27
ATXN3-240ENST00000556339 CUEDC1Q9NWM3 386 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-240ENST00000556339 ERVK-9P63128 1117 aa7.12□□□□□ -1.27
ATXN3-240ENST00000556339 POU4F2Q12837 409 aa7.12□□□□□ -1.27
ATXN3-240ENST00000556339 ZNF837Q96EG3 531 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-240ENST00000556339 ARHGEF10LQ9HCE6 1279 aa7.12□□□□□ -1.27
ATXN3-240ENST00000556339 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
ATXN3-240ENST00000556339 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 GTF2E1P29083 439 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-240ENST00000556339 GSK3AP49840 483 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 LYPD4Q6UWN0 246 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 MBIPQ9NS73 344 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
ATXN3-240ENST00000556339 MYCP01106 439 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-240ENST00000556339 CELA2BP08218 269 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-240ENST00000556339 CLN3Q13286 438 aa7.1□□□□□ -1.27
ATXN3-240ENST00000556339 GAS6Q14393 721 aa7.1□□□□□ -1.27
ATXN3-240ENST00000556339 GPAT2Q6NUI2 795 aa7.1□□□□□ -1.27
ATXN3-240ENST00000556339 NEDD1Q8NHV4 660 aa7.1□□□□□ -1.27
ATXN3-240ENST00000556339 GTPBP3Q969Y2 492 aaKnown RBP7.1□□□□□ -1.27
ATXN3-240ENST00000556339 NSFL1CQ9UNZ2 370 aaKnown RBP7.1□□□□□ -1.27
ATXN3-240ENST00000556339 CADPSQ9ULU8 1353 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 LAMC3Q9Y6N6 1575 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 SLC24A1O60721 1099 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 SCTRP47872 440 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 NBPF10Q6P3W6 841 aaKnown RBP7.09□□□□□ -1.27
ATXN3-240ENST00000556339 TAS1R3Q7RTX0 852 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 PODNQ7Z5L7 613 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 NBPF15Q8N660 670 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 RAB6BQ9NRW1 208 aa7.09□□□□□ -1.27
ATXN3-240ENST00000556339 DNMT3AQ9Y6K1 912 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-240ENST00000556339 IGF1RP08069 1367 aa7.08□□□□□ -1.28
ATXN3-240ENST00000556339 MX2P20592 715 aa7.08□□□□□ -1.28
ATXN3-240ENST00000556339 DBN1Q16643 649 aa7.08□□□□□ -1.28
ATXN3-240ENST00000556339 BANK1Q8NDB2 785 aa7.08□□□□□ -1.28
ATXN3-240ENST00000556339 WIZO95785 1651 aa7.07□□□□□ -1.28
ATXN3-240ENST00000556339 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms