RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 WNT7BP56706 349 aa7.25□□□□□ -1.25
ATXN3-238ENST00000556288 SH3BP2P78314 561 aa7.25□□□□□ -1.25
ATXN3-238ENST00000556288 AGERQ15109 404 aa7.25□□□□□ -1.25
ATXN3-238ENST00000556288 NBPF14Q5TI25 921 aa7.25□□□□□ -1.25
ATXN3-238ENST00000556288 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
ATXN3-238ENST00000556288 ABCA9Q8IUA7 1624 aa7.24□□□□□ -1.25
ATXN3-238ENST00000556288 SKOR1P84550 965 aa7.24□□□□□ -1.25
ATXN3-238ENST00000556288 FOXC1Q12948 553 aa7.24□□□□□ -1.25
ATXN3-238ENST00000556288 GDPD2Q9HCC8 539 aa7.24□□□□□ -1.25
ATXN3-238ENST00000556288 TBC1D2BQ9UPU7 963 aa7.24□□□□□ -1.25
ATXN3-238ENST00000556288 KIF14Q15058 1648 aa7.23□□□□□ -1.25
ATXN3-238ENST00000556288 RAD21O60216 631 aa7.23□□□□□ -1.25
ATXN3-238ENST00000556288 RC3H1Q5TC82 1133 aaKnown RBP7.23□□□□□ -1.25
ATXN3-238ENST00000556288 GPKOWQ92917 476 aaPredicted RBP eCLIP7.23□□□□□ -1.25
ATXN3-238ENST00000556288 FOXJ1Q92949 421 aa7.23□□□□□ -1.25
ATXN3-238ENST00000556288 CDC42BPBQ9Y5S2 1711 aa7.23□□□□□ -1.25
ATXN3-238ENST00000556288 ZC3H4Q9UPT8 1303 aaKnown RBP7.23□□□□□ -1.25
ATXN3-238ENST00000556288 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
ATXN3-238ENST00000556288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-238ENST00000556288 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 CDC42BPAQ5VT25 1732 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 TTC37Q6PGP7 1564 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 ABL2P42684 1182 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 EFCAB2Q5VUJ9 269 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 PDXDC2PQ6P474 469 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 BPHLQ86WA6 291 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-238ENST00000556288 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
ATXN3-238ENST00000556288 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
ATXN3-238ENST00000556288 FYCO1Q9BQS8 1478 aa7.22□□□□□ -1.25
ATXN3-238ENST00000556288 MAGEB6P1A0A0J9YX57 407 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 PTK2Q05397 1052 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 CRIPAKQ8N1N5 446 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 CARD14Q9BXL6 1004 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
ATXN3-238ENST00000556288 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-238ENST00000556288 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-238ENST00000556288 WNT7AO00755 349 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 ZBTB33Q86T24 672 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 PKD2L1Q9P0L9 805 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 ARHGAP5Q13017 1502 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 MAGI3Q5TCQ9 1506 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 CFAP74Q9C0B2 1584 aa7.2□□□□□ -1.26
ATXN3-238ENST00000556288 FANCAO15360 1455 aa7.19□□□□□ -1.26
ATXN3-238ENST00000556288 SUPT6HQ7KZ85 1726 aaKnown RBP7.19□□□□□ -1.26
ATXN3-238ENST00000556288 C11orf95C9JLR9 678 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-238ENST00000556288 VARSP26640 1264 aaKnown RBP7.19□□□□□ -1.26
ATXN3-238ENST00000556288 CLUAP1Q96AJ1 413 aa7.19□□□□□ -1.26
ATXN3-238ENST00000556288 MRGPRX2Q96LB1 330 aa7.19□□□□□ -1.26
ATXN3-238ENST00000556288 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
ATXN3-238ENST00000556288 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 ZBBXA8MT70 800 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 GPR37L1O60883 481 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 WWC1Q8IX03 1113 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-238ENST00000556288 CCNB3Q8WWL7 1395 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
ATXN3-238ENST00000556288 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-238ENST00000556288 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-238ENST00000556288 IRF5Q13568 498 aa7.17□□□□□ -1.26
ATXN3-238ENST00000556288 SH3RF1Q7Z6J0 888 aa7.17□□□□□ -1.26
ATXN3-238ENST00000556288 RICTORQ6R327 1708 aa7.17□□□□□ -1.26
ATXN3-238ENST00000556288 PLCH2O75038 1416 aa7.17□□□□□ -1.26
ATXN3-238ENST00000556288 SCAPERQ9BY12 1400 aa7.17□□□□□ -1.26
ATXN3-238ENST00000556288 ITSN2Q9NZM3 1697 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 TTC24A2A3L6 582 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-238ENST00000556288 AVPP01185 164 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 NR1H3Q13133 447 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 MLECQ14165 292 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 KANK4Q5T7N3 995 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-238ENST00000556288 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 AFAP1Q8N556 730 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 ADAM32Q8TC27 787 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 OCSTAMPQ9BR26 566 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 CFAP65Q6ZU64 1925 aaKnown RBP7.16□□□□□ -1.26
ATXN3-238ENST00000556288 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-238ENST00000556288 ADGRL1O94910 1474 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 NEO1Q92859 1461 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 TIAM1Q13009 1591 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
ATXN3-238ENST00000556288 SIAH2O43255 324 aa7.15□□□□□ -1.26
ATXN3-238ENST00000556288 ARID5BQ14865 1188 aa7.15□□□□□ -1.26
ATXN3-238ENST00000556288 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
ATXN3-238ENST00000556288 WASHC4Q2M389 1173 aa7.15□□□□□ -1.26
ATXN3-238ENST00000556288 ERFEQ4G0M1 354 aa7.15□□□□□ -1.26
ATXN3-238ENST00000556288 SNIP1Q8TAD8 396 aaKnown RBP7.15□□□□□ -1.26
ATXN3-238ENST00000556288 ZNF330Q9Y3S2 320 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-238ENST00000556288 ARAP3Q8WWN8 1544 aa7.15□□□□□ -1.27
ATXN3-238ENST00000556288 A6NJR5 290 aa7.14□□□□□ -1.27
ATXN3-238ENST00000556288 ALDH1A1P00352 501 aa7.14□□□□□ -1.27
ATXN3-238ENST00000556288 VAC14Q08AM6 782 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms