RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 A0A0G2JS52 829 aa10.6□□□□□ -0.71
ATXN3-236ENST00000556220 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
ATXN3-236ENST00000556220 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
ATXN3-236ENST00000556220 MYOM2P54296 1465 aa10.6□□□□□ -0.71
ATXN3-236ENST00000556220 UNC13BO14795 1591 aa10.6□□□□□ -0.71
ATXN3-236ENST00000556220 XRN1Q8IZH2 1706 aaKnown RBP10.59□□□□□ -0.71
ATXN3-236ENST00000556220 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
ATXN3-236ENST00000556220 TATDN2Q93075 761 aa10.59□□□□□ -0.71
ATXN3-236ENST00000556220 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
ATXN3-236ENST00000556220 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
ATXN3-236ENST00000556220 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.71
ATXN3-236ENST00000556220 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
ATXN3-236ENST00000556220 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
ATXN3-236ENST00000556220 RALGAPBQ86X10 1494 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 FOXO3O43524 673 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 LRP5O75197 1615 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 LAMC1P11047 1609 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
ATXN3-236ENST00000556220 NUP155O75694 1391 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 ROBO2Q9HCK4 1378 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 SMAPO00193 183 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 BAG6P46379 1132 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 PPP4CP60510 307 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-236ENST00000556220 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-236ENST00000556220 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
ATXN3-236ENST00000556220 VPS72Q15906 364 aa10.55□□□□□ -0.72
ATXN3-236ENST00000556220 SAMD7Q7Z3H4 446 aa10.55□□□□□ -0.72
ATXN3-236ENST00000556220 TTC13Q8NBP0 860 aa10.55□□□□□ -0.72
ATXN3-236ENST00000556220 SLIT2O94813 1529 aa10.54□□□□□ -0.72
ATXN3-236ENST00000556220 YY1P25490 414 aa10.54□□□□□ -0.72
ATXN3-236ENST00000556220 KCNC4Q03721 635 aa10.54□□□□□ -0.72
ATXN3-236ENST00000556220 COL22A1Q8NFW1 1626 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-236ENST00000556220 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
ATXN3-236ENST00000556220 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
ATXN3-236ENST00000556220 NUDT18Q6ZVK8 323 aa10.53□□□□□ -0.72
ATXN3-236ENST00000556220 E9PCH4 1651 aa10.53□□□□□ -0.72
ATXN3-236ENST00000556220 GLI3P10071 1580 aa10.52□□□□□ -0.72
ATXN3-236ENST00000556220 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-236ENST00000556220 R3HDM1Q15032 1099 aaKnown RBP10.52□□□□□ -0.73
ATXN3-236ENST00000556220 PXDNQ92626 1479 aa10.52□□□□□ -0.73
ATXN3-236ENST00000556220 SPATA31A3Q5VYP0 1347 aa10.52□□□□□ -0.73
ATXN3-236ENST00000556220 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
ATXN3-236ENST00000556220 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
ATXN3-236ENST00000556220 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
ATXN3-236ENST00000556220 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
ATXN3-236ENST00000556220 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
ATXN3-236ENST00000556220 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
ATXN3-236ENST00000556220 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
ATXN3-236ENST00000556220 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-236ENST00000556220 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
ATXN3-236ENST00000556220 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 MYT1Q01538 1121 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
ATXN3-236ENST00000556220 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
ATXN3-236ENST00000556220 PLCB2Q00722 1185 aa10.46□□□□□ -0.73
ATXN3-236ENST00000556220 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.73
ATXN3-236ENST00000556220 WAPLQ7Z5K2 1190 aa10.46□□□□□ -0.73
ATXN3-236ENST00000556220 RPGRIP1LQ68CZ1 1315 aa10.46□□□□□ -0.73
ATXN3-236ENST00000556220 SPHKAPQ2M3C7 1700 aa10.46□□□□□ -0.74
ATXN3-236ENST00000556220 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
ATXN3-236ENST00000556220 PSME1Q06323 249 aa10.45□□□□□ -0.74
ATXN3-236ENST00000556220 PTGDRQ13258 359 aa10.45□□□□□ -0.74
ATXN3-236ENST00000556220 CAMKK2Q96RR4 588 aa10.45□□□□□ -0.74
ATXN3-236ENST00000556220 EYA1Q99502 592 aa10.45□□□□□ -0.74
ATXN3-236ENST00000556220 TJAP1Q5JTD0 557 aa10.44□□□□□ -0.74
ATXN3-236ENST00000556220 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
ATXN3-236ENST00000556220 UTRNP46939 3433 aa10.44□□□□□ -0.74
ATXN3-236ENST00000556220 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
ATXN3-236ENST00000556220 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
ATXN3-236ENST00000556220 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
ATXN3-236ENST00000556220 NAIPQ13075 1403 aa10.43□□□□□ -0.74
ATXN3-236ENST00000556220 SLF2Q8IX21 1173 aa10.43□□□□□ -0.74
ATXN3-236ENST00000556220 STK26Q9P289 416 aa10.43□□□□□ -0.74
ATXN3-236ENST00000556220 RNF40O75150 1001 aa10.42□□□□□ -0.74
ATXN3-236ENST00000556220 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
ATXN3-236ENST00000556220 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
ATXN3-236ENST00000556220 LMOD2Q6P5Q4 547 aa10.42□□□□□ -0.74
ATXN3-236ENST00000556220 BTG4Q9NY30 223 aa10.42□□□□□ -0.74
ATXN3-236ENST00000556220 CDC42BPGQ6DT37 1551 aa10.42□□□□□ -0.74
ATXN3-236ENST00000556220 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
ATXN3-236ENST00000556220 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-236ENST00000556220 IL21Q9HBE4 155 aa10.41□□□□□ -0.74
ATXN3-236ENST00000556220 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
ATXN3-236ENST00000556220 SBNO1A3KN83 1393 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 SPATA31A5Q5VU36 1347 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 SPATA31A7Q8IWB4 1347 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 SEMA3EO15041 775 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 TRIM37O94972 964 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 APBA3O96018 575 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 ITGAEP38570 1179 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
ATXN3-236ENST00000556220 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms