RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 CDCA7Q9BWT1 371 aaPredicted RBP15.29■□□□□ 0.04
GABRB3-210ENST00000556166 OVOS2A0A0G2JMS6 1433 aa15.28■□□□□ 0.04
GABRB3-210ENST00000556166 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
GABRB3-210ENST00000556166 EXOC5O00471 708 aa15.27■□□□□ 0.03
GABRB3-210ENST00000556166 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.03
GABRB3-210ENST00000556166 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.03
GABRB3-210ENST00000556166 A0A0G2JS52 829 aa15.26■□□□□ 0.03
GABRB3-210ENST00000556166 CYP27B1O15528 508 aa15.26■□□□□ 0.03
GABRB3-210ENST00000556166 MYT1Q01538 1121 aa15.26■□□□□ 0.03
GABRB3-210ENST00000556166 DDB1Q16531 1140 aa15.26■□□□□ 0.03
GABRB3-210ENST00000556166 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
GABRB3-210ENST00000556166 MARCH10Q8NA82 808 aaPredicted RBP15.26■□□□□ 0.03
GABRB3-210ENST00000556166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
GABRB3-210ENST00000556166 RGS12O14924 1447 aa15.25■□□□□ 0.03
GABRB3-210ENST00000556166 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
GABRB3-210ENST00000556166 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
GABRB3-210ENST00000556166 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
GABRB3-210ENST00000556166 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
GABRB3-210ENST00000556166 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
GABRB3-210ENST00000556166 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
GABRB3-210ENST00000556166 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
GABRB3-210ENST00000556166 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
GABRB3-210ENST00000556166 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
GABRB3-210ENST00000556166 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
GABRB3-210ENST00000556166 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
GABRB3-210ENST00000556166 PHKG2P15735 406 aa15.21■□□□□ 0.03
GABRB3-210ENST00000556166 PNNQ9H307 717 aaKnown RBP15.21■□□□□ 0.03
GABRB3-210ENST00000556166 TNS2Q63HR2 1409 aa15.21■□□□□ 0.03
GABRB3-210ENST00000556166 PLEKHG2Q9H7P9 1386 aa15.21■□□□□ 0.03
GABRB3-210ENST00000556166 APAF1O14727 1248 aa15.2■□□□□ 0.02
GABRB3-210ENST00000556166 ILDR2Q71H61 639 aa15.2■□□□□ 0.02
GABRB3-210ENST00000556166 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
GABRB3-210ENST00000556166 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
GABRB3-210ENST00000556166 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
GABRB3-210ENST00000556166 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
GABRB3-210ENST00000556166 WNK3Q9BYP7 1800 aa15.19■□□□□ 0.02
GABRB3-210ENST00000556166 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
GABRB3-210ENST00000556166 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
GABRB3-210ENST00000556166 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
GABRB3-210ENST00000556166 NFE2L2Q16236 605 aa15.19■□□□□ 0.02
GABRB3-210ENST00000556166 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
GABRB3-210ENST00000556166 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
GABRB3-210ENST00000556166 GAS2L2Q8NHY3 880 aa15.18■□□□□ 0.02
GABRB3-210ENST00000556166 LGR6Q9HBX8 967 aa15.18■□□□□ 0.02
GABRB3-210ENST00000556166 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
GABRB3-210ENST00000556166 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
GABRB3-210ENST00000556166 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
GABRB3-210ENST00000556166 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
GABRB3-210ENST00000556166 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
GABRB3-210ENST00000556166 RIPK4P57078 832 aa15.16■□□□□ 0.02
GABRB3-210ENST00000556166 NEUROD2Q15784 382 aa15.16■□□□□ 0.02
GABRB3-210ENST00000556166 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
GABRB3-210ENST00000556166 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
GABRB3-210ENST00000556166 BRWD3Q6RI45 1802 aa15.16■□□□□ 0.02
GABRB3-210ENST00000556166 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
GABRB3-210ENST00000556166 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
GABRB3-210ENST00000556166 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
GABRB3-210ENST00000556166 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
GABRB3-210ENST00000556166 KCNQ2O43526 872 aa15.15■□□□□ 0.02
GABRB3-210ENST00000556166 NEFMP07197 916 aa15.15■□□□□ 0.02
GABRB3-210ENST00000556166 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
GABRB3-210ENST00000556166 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
GABRB3-210ENST00000556166 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
GABRB3-210ENST00000556166 MCM10Q7L590 875 aa15.14■□□□□ 0.01
GABRB3-210ENST00000556166 ACSBG1Q96GR2 724 aa15.14■□□□□ 0.01
GABRB3-210ENST00000556166 DCAF5Q96JK2 942 aa15.14■□□□□ 0.01
GABRB3-210ENST00000556166 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
GABRB3-210ENST00000556166 BCL9O00512 1426 aa15.13■□□□□ 0.01
GABRB3-210ENST00000556166 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
GABRB3-210ENST00000556166 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
GABRB3-210ENST00000556166 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
GABRB3-210ENST00000556166 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
GABRB3-210ENST00000556166 EP400Q96L91 3159 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 TRIM37O94972 964 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 PIGBQ92521 554 aa15.1■□□□□ 0.01
GABRB3-210ENST00000556166 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
GABRB3-210ENST00000556166 CABP4P57796 275 aa15.08■□□□□ 0
GABRB3-210ENST00000556166 CCDC27Q2M243 656 aa15.08■□□□□ 0
GABRB3-210ENST00000556166 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
GABRB3-210ENST00000556166 WWC1Q8IX03 1113 aa15.08■□□□□ 0
GABRB3-210ENST00000556166 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
GABRB3-210ENST00000556166 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
GABRB3-210ENST00000556166 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
GABRB3-210ENST00000556166 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
GABRB3-210ENST00000556166 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
GABRB3-210ENST00000556166 ZNF521Q96K83 1311 aa15.06■□□□□ 0
GABRB3-210ENST00000556166 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
GABRB3-210ENST00000556166 ASAP1Q9ULH1 1129 aa15.06■□□□□ 0
GABRB3-210ENST00000556166 TOGARAM1Q9Y4F4 1720 aa15.05■□□□□ 0
GABRB3-210ENST00000556166 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ 0
GABRB3-210ENST00000556166 ATG3Q9NT62 314 aa15.05■□□□□ -0
GABRB3-210ENST00000556166 KCNQ3O43525 872 aa15.04■□□□□ -0
GABRB3-210ENST00000556166 TEFQ10587 303 aa15.04■□□□□ -0
GABRB3-210ENST00000556166 SLC39A6Q13433 755 aa15.04■□□□□ -0
GABRB3-210ENST00000556166 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
GABRB3-210ENST00000556166 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
GABRB3-210ENST00000556166 NGEFQ8N5V2 710 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms