RNA–Protein interactions for RNA: ENST00000556038.5

VASH1-205, Transcript of vasohibin 1, humanhuman

TSL 5

Gene VASH1, Length 726 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-205ENST00000556038 AMER1Q5JTC6 1135 aaPredicted RBP23.66■■□□□ 1.38
VASH1-205ENST00000556038 DDX54Q8TDD1 881 aaKnown RBP23.66■■□□□ 1.38
VASH1-205ENST00000556038 SHANK3Q9BYB0 1731 aa23.66■■□□□ 1.38
VASH1-205ENST00000556038 LRP5O75197 1615 aa23.66■■□□□ 1.38
VASH1-205ENST00000556038 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.38
VASH1-205ENST00000556038 PER1O15534 1290 aaPredicted RBP23.64■■□□□ 1.37
VASH1-205ENST00000556038 NBPF14Q5TI25 921 aa23.64■■□□□ 1.37
VASH1-205ENST00000556038 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
VASH1-205ENST00000556038 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
VASH1-205ENST00000556038 TXNRD1Q16881 649 aa23.63■■□□□ 1.37
VASH1-205ENST00000556038 EYA1Q99502 592 aa23.63■■□□□ 1.37
VASH1-205ENST00000556038 KNSTRNQ9Y448 316 aa23.63■■□□□ 1.37
VASH1-205ENST00000556038 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
VASH1-205ENST00000556038 ANO8Q9HCE9 1232 aaPredicted RBP23.62■■□□□ 1.37
VASH1-205ENST00000556038 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
VASH1-205ENST00000556038 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
VASH1-205ENST00000556038 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
VASH1-205ENST00000556038 BTAF1O14981 1849 aa23.58■■□□□ 1.37
VASH1-205ENST00000556038 CYP27B1O15528 508 aa23.57■■□□□ 1.36
VASH1-205ENST00000556038 PRIM1P49642 420 aaKnown RBP23.57■■□□□ 1.36
VASH1-205ENST00000556038 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
VASH1-205ENST00000556038 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
VASH1-205ENST00000556038 PLEKHG2Q9H7P9 1386 aa23.56■■□□□ 1.36
VASH1-205ENST00000556038 IGSF1Q8N6C5 1336 aa23.56■■□□□ 1.36
VASH1-205ENST00000556038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.55■■□□□ 1.36
VASH1-205ENST00000556038 PKD1L3Q7Z443 1732 aa23.55■■□□□ 1.36
VASH1-205ENST00000556038 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
VASH1-205ENST00000556038 NKX1-1Q15270 411 aaPredicted RBP23.54■■□□□ 1.36
VASH1-205ENST00000556038 PAPPAQ13219 1627 aa23.54■■□□□ 1.36
VASH1-205ENST00000556038 LRRC4BQ9NT99 713 aa23.53■■□□□ 1.36
VASH1-205ENST00000556038 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
VASH1-205ENST00000556038 SLC15A2Q16348 729 aa23.51■■□□□ 1.35
VASH1-205ENST00000556038 SLC27A3Q5K4L6 730 aa23.5■■□□□ 1.35
VASH1-205ENST00000556038 SPG7Q9UQ90 795 aa23.49■■□□□ 1.35
VASH1-205ENST00000556038 CASZ1Q86V15 1759 aa23.49■■□□□ 1.35
VASH1-205ENST00000556038 SYTL4Q96C24 671 aaPredicted RBP23.48■■□□□ 1.35
VASH1-205ENST00000556038 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
VASH1-205ENST00000556038 IL13P35225 146 aa23.47■■□□□ 1.35
VASH1-205ENST00000556038 PDGFDQ9GZP0 370 aaPredicted RBP23.47■■□□□ 1.35
VASH1-205ENST00000556038 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
VASH1-205ENST00000556038 AKT1S1Q96B36 256 aa23.46■■□□□ 1.35
VASH1-205ENST00000556038 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
VASH1-205ENST00000556038 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
VASH1-205ENST00000556038 KDRP35968 1356 aa23.44■■□□□ 1.34
VASH1-205ENST00000556038 PHKG2P15735 406 aa23.44■■□□□ 1.34
VASH1-205ENST00000556038 SPON1Q9HCB6 807 aa23.44■■□□□ 1.34
VASH1-205ENST00000556038 LY75O60449 1722 aa23.44■■□□□ 1.34
VASH1-205ENST00000556038 MTHFSP49914 203 aa23.43■■□□□ 1.34
VASH1-205ENST00000556038 CC2D1BQ5T0F9 858 aaKnown RBP23.43■■□□□ 1.34
VASH1-205ENST00000556038 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
VASH1-205ENST00000556038 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
VASH1-205ENST00000556038 PIGBQ92521 554 aa23.4■■□□□ 1.34
VASH1-205ENST00000556038 KCNQ4P56696 695 aa23.39■■□□□ 1.33
VASH1-205ENST00000556038 PTGER2P43116 358 aa23.38■■□□□ 1.33
VASH1-205ENST00000556038 AMOTQ4VCS5 1084 aa23.38■■□□□ 1.33
VASH1-205ENST00000556038 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
VASH1-205ENST00000556038 CCNL1Q9UK58 526 aaPredicted RBP23.38■■□□□ 1.33
VASH1-205ENST00000556038 PLEKHO1Q53GL0 409 aaPredicted RBP23.37■■□□□ 1.33
VASH1-205ENST00000556038 SULT6B1Q6IMI4 303 aa23.37■■□□□ 1.33
VASH1-205ENST00000556038 SGIP1Q9BQI5 828 aa23.37■■□□□ 1.33
VASH1-205ENST00000556038 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
VASH1-205ENST00000556038 ITGB4P16144 1822 aa23.36■■□□□ 1.33
VASH1-205ENST00000556038 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
VASH1-205ENST00000556038 ZBTB7AO95365 584 aa23.35■■□□□ 1.33
VASH1-205ENST00000556038 SMARCC1Q92922 1105 aaPredicted RBP23.35■■□□□ 1.33
VASH1-205ENST00000556038 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
VASH1-205ENST00000556038 PNPLA7Q6ZV29 1317 aa23.34■■□□□ 1.33
VASH1-205ENST00000556038 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.33
VASH1-205ENST00000556038 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.33
VASH1-205ENST00000556038 DCAF5Q96JK2 942 aa23.33■■□□□ 1.33
VASH1-205ENST00000556038 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.32
VASH1-205ENST00000556038 ERVV-2B6SEH9 535 aa23.32■■□□□ 1.32
VASH1-205ENST00000556038 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
VASH1-205ENST00000556038 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
VASH1-205ENST00000556038 DIAPH1O60610 1272 aaKnown RBP23.31■■□□□ 1.32
VASH1-205ENST00000556038 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
VASH1-205ENST00000556038 HMGB2P26583 209 aaKnown RBP23.3■■□□□ 1.32
VASH1-205ENST00000556038 SLC16A10Q8TF71 515 aa23.3■■□□□ 1.32
VASH1-205ENST00000556038 ASAP1Q9ULH1 1129 aa23.3■■□□□ 1.32
VASH1-205ENST00000556038 ATG3Q9NT62 314 aa23.29■■□□□ 1.32
VASH1-205ENST00000556038 TFCP2L1Q9NZI6 479 aa23.29■■□□□ 1.32
VASH1-205ENST00000556038 TUBGCP6Q96RT7 1819 aa23.27■■□□□ 1.32
VASH1-205ENST00000556038 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
VASH1-205ENST00000556038 SIK1P57059 783 aa23.27■■□□□ 1.32
VASH1-205ENST00000556038 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
VASH1-205ENST00000556038 C5P01031 1676 aa23.25■■□□□ 1.31
VASH1-205ENST00000556038 COL24A1Q17RW2 1714 aa23.25■■□□□ 1.31
VASH1-205ENST00000556038 TAF1LQ8IZX4 1826 aa23.25■■□□□ 1.31
VASH1-205ENST00000556038 HMOX1P09601 288 aa23.25■■□□□ 1.31
VASH1-205ENST00000556038 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
VASH1-205ENST00000556038 AKAP4Q5JQC9 854 aa23.24■■□□□ 1.31
VASH1-205ENST00000556038 COL23A1Q86Y22 540 aaPredicted RBP23.24■■□□□ 1.31
VASH1-205ENST00000556038 PPP2R1AP30153 589 aa23.23■■□□□ 1.31
VASH1-205ENST00000556038 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
VASH1-205ENST00000556038 ITPK1Q13572 414 aa23.22■■□□□ 1.31
VASH1-205ENST00000556038 LINC00116Q8NCU8 138 aa23.22■■□□□ 1.31
VASH1-205ENST00000556038 SLC4A9Q96Q91 983 aa23.22■■□□□ 1.31
VASH1-205ENST00000556038 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
VASH1-205ENST00000556038 CABP4P57796 275 aa23.21■■□□□ 1.31
VASH1-205ENST00000556038 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms