RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 KIF20BQ96Q89 1820 aa20.26■□□□□ 0.83
CHMP4BP1-201ENST00000556017 PNPLA7Q6ZV29 1317 aa20.26■□□□□ 0.83
CHMP4BP1-201ENST00000556017 PRIM1P49642 420 aaKnown RBP20.25■□□□□ 0.83
CHMP4BP1-201ENST00000556017 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
CHMP4BP1-201ENST00000556017 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
CHMP4BP1-201ENST00000556017 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
CHMP4BP1-201ENST00000556017 ARXQ96QS3 562 aa20.25■□□□□ 0.83
CHMP4BP1-201ENST00000556017 RTL1A6NKG5 1358 aa20.24■□□□□ 0.83
CHMP4BP1-201ENST00000556017 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
CHMP4BP1-201ENST00000556017 AMPHP49418 695 aa20.23■□□□□ 0.83
CHMP4BP1-201ENST00000556017 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
CHMP4BP1-201ENST00000556017 USP47Q96K76 1375 aa20.22■□□□□ 0.83
CHMP4BP1-201ENST00000556017 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
CHMP4BP1-201ENST00000556017 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
CHMP4BP1-201ENST00000556017 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
CHMP4BP1-201ENST00000556017 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
CHMP4BP1-201ENST00000556017 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
CHMP4BP1-201ENST00000556017 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
CHMP4BP1-201ENST00000556017 SLC24A1O60721 1099 aa20.19■□□□□ 0.82
CHMP4BP1-201ENST00000556017 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
CHMP4BP1-201ENST00000556017 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
CHMP4BP1-201ENST00000556017 ITGB4P16144 1822 aa20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 CARD14Q9BXL6 1004 aa20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 C5P01031 1676 aa20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 INSRP06213 1382 aa20.18■□□□□ 0.82
CHMP4BP1-201ENST00000556017 PKD1L3Q7Z443 1732 aa20.17■□□□□ 0.82
CHMP4BP1-201ENST00000556017 TMF1P82094 1093 aa20.16■□□□□ 0.82
CHMP4BP1-201ENST00000556017 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
CHMP4BP1-201ENST00000556017 CGNL1Q0VF96 1302 aa20.15■□□□□ 0.82
CHMP4BP1-201ENST00000556017 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
CHMP4BP1-201ENST00000556017 FLT4P35916 1363 aa20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 CYP27B1O15528 508 aa20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 NLGN2Q8NFZ4 835 aa20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
CHMP4BP1-201ENST00000556017 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
CHMP4BP1-201ENST00000556017 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
CHMP4BP1-201ENST00000556017 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
CHMP4BP1-201ENST00000556017 RAPGEF4Q8WZA2 1011 aa20.1■□□□□ 0.81
CHMP4BP1-201ENST00000556017 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
CHMP4BP1-201ENST00000556017 TATP17735 454 aaPredicted RBP20.09■□□□□ 0.81
CHMP4BP1-201ENST00000556017 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
CHMP4BP1-201ENST00000556017 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
CHMP4BP1-201ENST00000556017 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
CHMP4BP1-201ENST00000556017 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
CHMP4BP1-201ENST00000556017 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
CHMP4BP1-201ENST00000556017 POLD1P28340 1107 aa20.07■□□□□ 0.8
CHMP4BP1-201ENST00000556017 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
CHMP4BP1-201ENST00000556017 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
CHMP4BP1-201ENST00000556017 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHMP4BP1-201ENST00000556017 GPR162Q16538 588 aa20.05■□□□□ 0.8
CHMP4BP1-201ENST00000556017 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
CHMP4BP1-201ENST00000556017 KLHL34Q8N239 644 aa20.04■□□□□ 0.8
CHMP4BP1-201ENST00000556017 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
CHMP4BP1-201ENST00000556017 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
CHMP4BP1-201ENST00000556017 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
CHMP4BP1-201ENST00000556017 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
CHMP4BP1-201ENST00000556017 SMIM5Q71RC9 77 aa20.02■□□□□ 0.8
CHMP4BP1-201ENST00000556017 PIGBQ92521 554 aa20.02■□□□□ 0.8
CHMP4BP1-201ENST00000556017 EYA1Q99502 592 aa20.01■□□□□ 0.79
CHMP4BP1-201ENST00000556017 POLKQ9UBT6 870 aa20■□□□□ 0.79
CHMP4BP1-201ENST00000556017 C1QTNF8P60827 252 aa19.99■□□□□ 0.79
CHMP4BP1-201ENST00000556017 MSH5O43196 834 aa19.98■□□□□ 0.79
CHMP4BP1-201ENST00000556017 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
CHMP4BP1-201ENST00000556017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.96■□□□□ 0.79
CHMP4BP1-201ENST00000556017 CEP350Q5VT06 3117 aa19.95■□□□□ 0.78
CHMP4BP1-201ENST00000556017 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
CHMP4BP1-201ENST00000556017 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
CHMP4BP1-201ENST00000556017 SMARCC1Q92922 1105 aaPredicted RBP19.95■□□□□ 0.78
CHMP4BP1-201ENST00000556017 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CHMP4BP1-201ENST00000556017 PHKG2P15735 406 aa19.94■□□□□ 0.78
CHMP4BP1-201ENST00000556017 ITPK1Q13572 414 aa19.94■□□□□ 0.78
CHMP4BP1-201ENST00000556017 FLAD1Q8NFF5 587 aa19.94■□□□□ 0.78
CHMP4BP1-201ENST00000556017 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
CHMP4BP1-201ENST00000556017 CD2APQ9Y5K6 639 aa19.94■□□□□ 0.78
CHMP4BP1-201ENST00000556017 KIAA1551Q9HCM1 1747 aa19.93■□□□□ 0.78
CHMP4BP1-201ENST00000556017 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
CHMP4BP1-201ENST00000556017 SIK1P57059 783 aa19.93■□□□□ 0.78
CHMP4BP1-201ENST00000556017 EIF4A2Q14240 407 aaKnown RBP19.93■□□□□ 0.78
CHMP4BP1-201ENST00000556017 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
CHMP4BP1-201ENST00000556017 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
CHMP4BP1-201ENST00000556017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.92■□□□□ 0.78
CHMP4BP1-201ENST00000556017 COL5A3P25940 1745 aaPredicted RBP19.91■□□□□ 0.78
CHMP4BP1-201ENST00000556017 SLC4A9Q96Q91 983 aa19.91■□□□□ 0.78
CHMP4BP1-201ENST00000556017 KDRP35968 1356 aa19.91■□□□□ 0.78
CHMP4BP1-201ENST00000556017 KIF13BQ9NQT8 1826 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 AK7Q96M32 723 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 IGSF1Q8N6C5 1336 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 ADCY9O60503 1353 aa19.9■□□□□ 0.78
CHMP4BP1-201ENST00000556017 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
CHMP4BP1-201ENST00000556017 PHF14O94880 888 aa19.89■□□□□ 0.77
CHMP4BP1-201ENST00000556017 SSFA2P28290 1259 aa19.89■□□□□ 0.77
CHMP4BP1-201ENST00000556017 MYH14Q7Z406 1995 aaKnown RBP19.89■□□□□ 0.77
CHMP4BP1-201ENST00000556017 PLEKHG2Q9H7P9 1386 aa19.89■□□□□ 0.77
CHMP4BP1-201ENST00000556017 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms