RNA–Protein interactions for RNA: ENST00000556006.6

CASC1-210, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 1,774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-210ENST00000556006 TBC1D9Q6ZT07 1266 aa6.93□□□□□ -1.3
CASC1-210ENST00000556006 KCTD15Q96SI1 283 aaPredicted RBP6.93□□□□□ -1.3
CASC1-210ENST00000556006 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
CASC1-210ENST00000556006 ESPNB1AK53 854 aa6.92□□□□□ -1.3
CASC1-210ENST00000556006 CCDC85AQ96PX6 553 aaPredicted RBP6.92□□□□□ -1.3
CASC1-210ENST00000556006 GSK3AP49840 483 aa6.92□□□□□ -1.3
CASC1-210ENST00000556006 RAB15P59190 212 aa6.92□□□□□ -1.3
CASC1-210ENST00000556006 KRT76Q01546 638 aa6.92□□□□□ -1.3
CASC1-210ENST00000556006 INTS6LQ5JSJ4 861 aaKnown RBP6.92□□□□□ -1.3
CASC1-210ENST00000556006 ARID3AQ99856 593 aa6.92□□□□□ -1.3
CASC1-210ENST00000556006 PTSQ03393 145 aa6.91□□□□□ -1.3
CASC1-210ENST00000556006 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
CASC1-210ENST00000556006 GPR161Q8N6U8 529 aaKnown RBP6.91□□□□□ -1.3
CASC1-210ENST00000556006 NANOS1Q8WY41 292 aaKnown RBP6.91□□□□□ -1.3
CASC1-210ENST00000556006 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
CASC1-210ENST00000556006 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
CASC1-210ENST00000556006 CDV3Q9UKY7 258 aaKnown RBP6.91□□□□□ -1.3
CASC1-210ENST00000556006 RNF225M0QZC1 329 aaPredicted RBP6.9□□□□□ -1.3
CASC1-210ENST00000556006 SPINT1O43278 529 aa6.9□□□□□ -1.3
CASC1-210ENST00000556006 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
CASC1-210ENST00000556006 Q6ZVU0 165 aa6.9□□□□□ -1.3
CASC1-210ENST00000556006 KCTD17Q8N5Z5 321 aa6.9□□□□□ -1.3
CASC1-210ENST00000556006 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
CASC1-210ENST00000556006 TFIP11Q9UBB9 837 aaKnown RBP6.9□□□□□ -1.3
CASC1-210ENST00000556006 CHIC2Q9UKJ5 165 aa6.9□□□□□ -1.3
CASC1-210ENST00000556006 PALM3A6NDB9 673 aaPredicted RBP6.9□□□□□ -1.31
CASC1-210ENST00000556006 NBPF20Q3BBV1 942 aa6.9□□□□□ -1.31
CASC1-210ENST00000556006 CFAP70Q5T0N1 1121 aa6.9□□□□□ -1.31
CASC1-210ENST00000556006 TMEM151AQ8N4L1 468 aa6.9□□□□□ -1.31
CASC1-210ENST00000556006 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.31
CASC1-210ENST00000556006 SLFNL1Q499Z3 407 aa6.89□□□□□ -1.31
CASC1-210ENST00000556006 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
CASC1-210ENST00000556006 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
CASC1-210ENST00000556006 COL25A1Q9BXS0 654 aaPredicted RBP6.89□□□□□ -1.31
CASC1-210ENST00000556006 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
CASC1-210ENST00000556006 FIGNL2A6NMB9 653 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 ERVH48-1M5A8F1 160 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 SKIP12755 728 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
CASC1-210ENST00000556006 CBLBQ13191 982 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 SUZ12Q15022 739 aaKnown RBP6.88□□□□□ -1.31
CASC1-210ENST00000556006 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
CASC1-210ENST00000556006 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 RASSF7Q02833 373 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 PLPP7Q8NBV4 271 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 MAFBQ9Y5Q3 323 aaPredicted RBP6.87□□□□□ -1.31
CASC1-210ENST00000556006 ATP9BO43861 1147 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 RFX1P22670 979 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 SCTRP47872 440 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 CCDC97Q96F63 343 aaPredicted RBP6.87□□□□□ -1.31
CASC1-210ENST00000556006 SERPINA10Q9UK55 444 aa6.87□□□□□ -1.31
CASC1-210ENST00000556006 USP17L5A8MUK1 530 aa6.86□□□□□ -1.31
CASC1-210ENST00000556006 GDF11O95390 407 aa6.86□□□□□ -1.31
CASC1-210ENST00000556006 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
CASC1-210ENST00000556006 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
CASC1-210ENST00000556006 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 PCDHB11Q9Y5F2 797 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 ITGA6P23229 1130 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 SRPK2P78362 688 aaKnown RBP6.85□□□□□ -1.31
CASC1-210ENST00000556006 NCOA4Q13772 614 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 ZNF784Q8NCA9 323 aaPredicted RBP6.85□□□□□ -1.31
CASC1-210ENST00000556006 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
CASC1-210ENST00000556006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
CASC1-210ENST00000556006 LILRA1O75019 489 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 SLURP2P0DP57 97 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 ADD1P35611 737 aaKnown RBP6.84□□□□□ -1.31
CASC1-210ENST00000556006 CDCA8Q53HL2 280 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 OXLD1Q5BKU9 147 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 RNF20Q5VTR2 975 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 SV2AQ7L0J3 742 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 CYLDQ9NQC7 956 aa6.84□□□□□ -1.31
CASC1-210ENST00000556006 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
CASC1-210ENST00000556006 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
CASC1-210ENST00000556006 AGBL1Q96MI9 1066 aa6.83□□□□□ -1.32
CASC1-210ENST00000556006 CTSOP43234 321 aaPredicted RBP6.82□□□□□ -1.32
CASC1-210ENST00000556006 RELBQ01201 579 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 CDC14CA4D256 554 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 ARHGEF15O94989 841 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
CASC1-210ENST00000556006 ERVK-9P63128 1117 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 MAP7D1Q3KQU3 841 aa6.82□□□□□ -1.32
CASC1-210ENST00000556006 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
CASC1-210ENST00000556006 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
CASC1-210ENST00000556006 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
CASC1-210ENST00000556006 WHAMMQ8TF30 809 aa6.81□□□□□ -1.32
CASC1-210ENST00000556006 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
CASC1-210ENST00000556006 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
CASC1-210ENST00000556006 MKRN1Q9UHC7 482 aaKnown RBP6.8□□□□□ -1.32
CASC1-210ENST00000556006 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
CASC1-210ENST00000556006 DNMT3AQ9Y6K1 912 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms