RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 TMEM57Q8N5G2 664 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
EFCAB11-209ENST00000556005 CRB1P82279 1406 aa12.84□□□□□ -0.35
EFCAB11-209ENST00000556005 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
EFCAB11-209ENST00000556005 MST1RQ04912 1400 aa12.84□□□□□ -0.35
EFCAB11-209ENST00000556005 LTN1O94822 1766 aa12.84□□□□□ -0.35
EFCAB11-209ENST00000556005 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
EFCAB11-209ENST00000556005 USP19O94966 1318 aa12.83□□□□□ -0.36
EFCAB11-209ENST00000556005 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
EFCAB11-209ENST00000556005 SLIT3O75094 1523 aa12.83□□□□□ -0.36
EFCAB11-209ENST00000556005 MSH6P52701 1360 aa12.83□□□□□ -0.36
EFCAB11-209ENST00000556005 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
EFCAB11-209ENST00000556005 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
EFCAB11-209ENST00000556005 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
EFCAB11-209ENST00000556005 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
EFCAB11-209ENST00000556005 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
EFCAB11-209ENST00000556005 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 TRPM3Q9HCF6 1732 aaPredicted RBP12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 RGS3P49796 1198 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
EFCAB11-209ENST00000556005 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
EFCAB11-209ENST00000556005 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-209ENST00000556005 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-209ENST00000556005 LMTK3Q96Q04 1460 aa12.8□□□□□ -0.36
EFCAB11-209ENST00000556005 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
EFCAB11-209ENST00000556005 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
EFCAB11-209ENST00000556005 ABCC4O15439 1325 aa12.79□□□□□ -0.36
EFCAB11-209ENST00000556005 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
EFCAB11-209ENST00000556005 PTPRCP08575 1304 aa12.77□□□□□ -0.36
EFCAB11-209ENST00000556005 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
EFCAB11-209ENST00000556005 DDX17Q92841 729 aaKnown RBP12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 ALS2Q96Q42 1657 aa12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
EFCAB11-209ENST00000556005 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
EFCAB11-209ENST00000556005 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
EFCAB11-209ENST00000556005 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 ERBB3P21860 1342 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 SPATA31A3Q5VYP0 1347 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
EFCAB11-209ENST00000556005 ZNF530Q6P9A1 599 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-209ENST00000556005 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
EFCAB11-209ENST00000556005 IPO9Q96P70 1041 aaKnown RBP12.73□□□□□ -0.37
EFCAB11-209ENST00000556005 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-209ENST00000556005 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
EFCAB11-209ENST00000556005 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
EFCAB11-209ENST00000556005 ZNF335Q9H4Z2 1342 aaPredicted RBP12.72□□□□□ -0.37
EFCAB11-209ENST00000556005 PXDNQ92626 1479 aa12.72□□□□□ -0.37
EFCAB11-209ENST00000556005 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
EFCAB11-209ENST00000556005 TEFQ10587 303 aa12.71□□□□□ -0.37
EFCAB11-209ENST00000556005 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
EFCAB11-209ENST00000556005 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
EFCAB11-209ENST00000556005 RGPD2P0DJD1 1756 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 XIRP1Q702N8 1843 aaKnown RBP12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 MPRIPQ6WCQ1 1025 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
EFCAB11-209ENST00000556005 CAMTA1Q9Y6Y1 1673 aa12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 RGS12O14924 1447 aa12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
EFCAB11-209ENST00000556005 HOXB7P09629 217 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 NUCB1Q02818 461 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 CPDO75976 1380 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 ABCC6O95255 1503 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 LMO7Q8WWI1 1683 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms