RNA–Protein interactions for RNA: ENST00000555960.5

ATL1-207, Transcript of atlastin GTPase 1, humanhuman

TSL 5

Gene ATL1, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-207ENST00000555960 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
ATL1-207ENST00000555960 PLSCR1O15162 318 aa17.76■□□□□ 0.43
ATL1-207ENST00000555960 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
ATL1-207ENST00000555960 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
ATL1-207ENST00000555960 NPC1L1Q9UHC9 1359 aa17.73■□□□□ 0.43
ATL1-207ENST00000555960 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
ATL1-207ENST00000555960 PROM2Q8N271 834 aa17.72■□□□□ 0.43
ATL1-207ENST00000555960 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
ATL1-207ENST00000555960 CNGB1Q14028 1251 aaPredicted RBP17.71■□□□□ 0.43
ATL1-207ENST00000555960 NHSQ6T4R5 1651 aa17.71■□□□□ 0.42
ATL1-207ENST00000555960 RREB1Q92766 1687 aa17.71■□□□□ 0.42
ATL1-207ENST00000555960 MTHFSP49914 203 aa17.7■□□□□ 0.42
ATL1-207ENST00000555960 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
ATL1-207ENST00000555960 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
ATL1-207ENST00000555960 CYP27B1O15528 508 aa17.69■□□□□ 0.42
ATL1-207ENST00000555960 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
ATL1-207ENST00000555960 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
ATL1-207ENST00000555960 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
ATL1-207ENST00000555960 TXNRD1Q16881 649 aa17.68■□□□□ 0.42
ATL1-207ENST00000555960 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
ATL1-207ENST00000555960 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
ATL1-207ENST00000555960 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
ATL1-207ENST00000555960 IL13P35225 146 aa17.67■□□□□ 0.42
ATL1-207ENST00000555960 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
ATL1-207ENST00000555960 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
ATL1-207ENST00000555960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATL1-207ENST00000555960 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
ATL1-207ENST00000555960 AEBP1Q8IUX7 1158 aa17.65■□□□□ 0.42
ATL1-207ENST00000555960 PKD1L3Q7Z443 1732 aa17.64■□□□□ 0.41
ATL1-207ENST00000555960 BTAF1O14981 1849 aa17.64■□□□□ 0.41
ATL1-207ENST00000555960 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
ATL1-207ENST00000555960 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
ATL1-207ENST00000555960 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
ATL1-207ENST00000555960 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
ATL1-207ENST00000555960 SULT6B1Q6IMI4 303 aa17.62■□□□□ 0.41
ATL1-207ENST00000555960 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
ATL1-207ENST00000555960 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
ATL1-207ENST00000555960 PHKG2P15735 406 aa17.61■□□□□ 0.41
ATL1-207ENST00000555960 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
ATL1-207ENST00000555960 KDRP35968 1356 aa17.61■□□□□ 0.41
ATL1-207ENST00000555960 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
ATL1-207ENST00000555960 LRRC4BQ9NT99 713 aa17.6■□□□□ 0.41
ATL1-207ENST00000555960 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
ATL1-207ENST00000555960 AMOTQ4VCS5 1084 aa17.58■□□□□ 0.4
ATL1-207ENST00000555960 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
ATL1-207ENST00000555960 HMOX1P09601 288 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 PPP2R1AP30153 589 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
ATL1-207ENST00000555960 KCNQ4P56696 695 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 SLC27A3Q5K4L6 730 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 STK32BQ9NY57 414 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
ATL1-207ENST00000555960 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
ATL1-207ENST00000555960 PIGBQ92521 554 aa17.56■□□□□ 0.4
ATL1-207ENST00000555960 PDGFDQ9GZP0 370 aaPredicted RBP17.55■□□□□ 0.4
ATL1-207ENST00000555960 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
ATL1-207ENST00000555960 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
ATL1-207ENST00000555960 U2SURPO15042 1029 aaKnown RBP17.53■□□□□ 0.4
ATL1-207ENST00000555960 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
ATL1-207ENST00000555960 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
ATL1-207ENST00000555960 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
ATL1-207ENST00000555960 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
ATL1-207ENST00000555960 TMOD3Q9NYL9 352 aa17.53■□□□□ 0.4
ATL1-207ENST00000555960 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
ATL1-207ENST00000555960 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
ATL1-207ENST00000555960 LY75O60449 1722 aa17.52■□□□□ 0.4
ATL1-207ENST00000555960 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
ATL1-207ENST00000555960 ITGB4P16144 1822 aa17.51■□□□□ 0.39
ATL1-207ENST00000555960 LRP5O75197 1615 aa17.51■□□□□ 0.39
ATL1-207ENST00000555960 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
ATL1-207ENST00000555960 KDM6AO15550 1401 aaPredicted RBP17.51■□□□□ 0.39
ATL1-207ENST00000555960 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
ATL1-207ENST00000555960 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
ATL1-207ENST00000555960 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
ATL1-207ENST00000555960 SRCAPQ6ZRS2 3230 aa17.49■□□□□ 0.39
ATL1-207ENST00000555960 MTHFSDQ2M296 383 aaKnown RBP17.49■□□□□ 0.39
ATL1-207ENST00000555960 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
ATL1-207ENST00000555960 CABP4P57796 275 aa17.48■□□□□ 0.39
ATL1-207ENST00000555960 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
ATL1-207ENST00000555960 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
ATL1-207ENST00000555960 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
ATL1-207ENST00000555960 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
ATL1-207ENST00000555960 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
ATL1-207ENST00000555960 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.39
ATL1-207ENST00000555960 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
ATL1-207ENST00000555960 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
ATL1-207ENST00000555960 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
ATL1-207ENST00000555960 SIK1P57059 783 aa17.45■□□□□ 0.38
ATL1-207ENST00000555960 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
ATL1-207ENST00000555960 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
ATL1-207ENST00000555960 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
ATL1-207ENST00000555960 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
ATL1-207ENST00000555960 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
ATL1-207ENST00000555960 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.38
ATL1-207ENST00000555960 RALBP1Q15311 655 aa17.44■□□□□ 0.38
ATL1-207ENST00000555960 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
ATL1-207ENST00000555960 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
ATL1-207ENST00000555960 MTFR1LQ9H019 292 aa17.43■□□□□ 0.38
ATL1-207ENST00000555960 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms