RNA–Protein interactions for RNA: ENST00000555782.1

RAD51B-221, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-221ENST00000555782 GPATCH8Q9UKJ3 1502 aaKnown RBP10.65□□□□□ -0.7
RAD51B-221ENST00000555782 NPATQ14207 1427 aa10.65□□□□□ -0.7
RAD51B-221ENST00000555782 SMARCA5O60264 1052 aaPredicted RBP10.64□□□□□ -0.71
RAD51B-221ENST00000555782 GCGRP47871 477 aa10.64□□□□□ -0.71
RAD51B-221ENST00000555782 CAMSAP1Q5T5Y3 1602 aa10.64□□□□□ -0.71
RAD51B-221ENST00000555782 MYOM3Q5VTT5 1437 aa10.64□□□□□ -0.71
RAD51B-221ENST00000555782 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
RAD51B-221ENST00000555782 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
RAD51B-221ENST00000555782 IQSEC2Q5JU85 1478 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L3A6NCW0 530 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L4A6NCW7 530 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 ITGAEP38570 1179 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 HNRNPMP52272 730 aaKnown RBP eCLIP10.63□□□□□ -0.71
RAD51B-221ENST00000555782 NR1H3Q13133 447 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 FAM50AQ14320 339 aaKnown RBP10.63□□□□□ -0.71
RAD51B-221ENST00000555782 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L1Q7RTZ2 530 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
RAD51B-221ENST00000555782 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 ZMYM3Q14202 1370 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 MROH2AA6NES4 1674 aa10.63□□□□□ -0.71
RAD51B-221ENST00000555782 PLXNC1O60486 1568 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 INO80Q9ULG1 1556 aaPredicted RBP10.62□□□□□ -0.71
RAD51B-221ENST00000555782 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L21D6R901 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 EPS8L1Q8TE68 723 aa10.62□□□□□ -0.71
RAD51B-221ENST00000555782 ZNF335Q9H4Z2 1342 aaPredicted RBP10.61□□□□□ -0.71
RAD51B-221ENST00000555782 PTPRKQ15262 1439 aa10.61□□□□□ -0.71
RAD51B-221ENST00000555782 SERPINB4P48594 390 aa10.61□□□□□ -0.71
RAD51B-221ENST00000555782 NUDT18Q6ZVK8 323 aa10.61□□□□□ -0.71
RAD51B-221ENST00000555782 A2MP01023 1474 aa10.61□□□□□ -0.71
RAD51B-221ENST00000555782 KIAA1107Q9UPP5 1409 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 MYO3AQ8NEV4 1616 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
RAD51B-221ENST00000555782 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 NAALADL2Q58DX5 795 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 C1orf216Q8TAB5 229 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
RAD51B-221ENST00000555782 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
RAD51B-221ENST00000555782 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
RAD51B-221ENST00000555782 CLTCQ00610 1675 aaKnown RBP10.6□□□□□ -0.71
RAD51B-221ENST00000555782 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 USP17L5A8MUK1 530 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 CFAP99D6REC4 459 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 SKIP12755 728 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 NR6A1Q15406 480 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 CFDP1Q9UEE9 299 aaPredicted RBP10.59□□□□□ -0.71
RAD51B-221ENST00000555782 EGFL7Q9UHF1 273 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 PLA2R1Q13018 1463 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 TCOF1Q13428 1488 aaKnown RBP10.59□□□□□ -0.71
RAD51B-221ENST00000555782 PLEKHH2Q8IVE3 1493 aa10.59□□□□□ -0.71
RAD51B-221ENST00000555782 CEP170BQ9Y4F5 1589 aaPredicted RBP10.59□□□□□ -0.71
RAD51B-221ENST00000555782 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
RAD51B-221ENST00000555782 LZTS3O60299 673 aaPredicted RBP10.58□□□□□ -0.72
RAD51B-221ENST00000555782 NUDT7P0C024 238 aa10.58□□□□□ -0.72
RAD51B-221ENST00000555782 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
RAD51B-221ENST00000555782 ANKRD13AQ8IZ07 590 aa10.58□□□□□ -0.72
RAD51B-221ENST00000555782 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.72
RAD51B-221ENST00000555782 MKRN1Q9UHC7 482 aaKnown RBP10.58□□□□□ -0.72
RAD51B-221ENST00000555782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
RAD51B-221ENST00000555782 PTK7Q13308 1070 aa10.57□□□□□ -0.72
RAD51B-221ENST00000555782 COL19A1Q14993 1142 aa10.57□□□□□ -0.72
RAD51B-221ENST00000555782 DOK7Q18PE1 504 aa10.57□□□□□ -0.72
RAD51B-221ENST00000555782 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
RAD51B-221ENST00000555782 GGT6Q6P531 493 aa10.57□□□□□ -0.72
RAD51B-221ENST00000555782 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
RAD51B-221ENST00000555782 ZNF644Q9H582 1327 aaPredicted RBP10.57□□□□□ -0.72
RAD51B-221ENST00000555782 UBAP1LF5GYI3 381 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 ZEB1P37275 1124 aaPredicted RBP10.56□□□□□ -0.72
RAD51B-221ENST00000555782 CRTC2Q53ET0 693 aaPredicted RBP10.56□□□□□ -0.72
RAD51B-221ENST00000555782 ARSIQ5FYB1 569 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 TATDN2Q93075 761 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 SLAIN2Q9P270 581 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
RAD51B-221ENST00000555782 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
RAD51B-221ENST00000555782 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
RAD51B-221ENST00000555782 RASA1P20936 1047 aa10.55□□□□□ -0.72
RAD51B-221ENST00000555782 FBXO33Q7Z6M2 555 aa10.55□□□□□ -0.72
RAD51B-221ENST00000555782 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms