RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
SNX6-205ENST00000555648 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
SNX6-205ENST00000555648 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
SNX6-205ENST00000555648 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
SNX6-205ENST00000555648 NHSQ6T4R5 1651 aa21.23■□□□□ 0.99
SNX6-205ENST00000555648 MEGF6O75095 1541 aa21.23■□□□□ 0.99
SNX6-205ENST00000555648 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
SNX6-205ENST00000555648 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
SNX6-205ENST00000555648 ATF5Q9Y2D1 282 aaPredicted RBP21.21■□□□□ 0.99
SNX6-205ENST00000555648 PDGFDQ9GZP0 370 aaPredicted RBP21.2■□□□□ 0.98
SNX6-205ENST00000555648 PANK3Q9H999 370 aa21.2■□□□□ 0.98
SNX6-205ENST00000555648 PCDH11XQ9BZA7 1347 aa21.2■□□□□ 0.98
SNX6-205ENST00000555648 PCDH11YQ9BZA8 1340 aa21.2■□□□□ 0.98
SNX6-205ENST00000555648 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
SNX6-205ENST00000555648 MTFR1LQ9H019 292 aa21.18■□□□□ 0.98
SNX6-205ENST00000555648 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
SNX6-205ENST00000555648 MYOM1P52179 1685 aa21.18■□□□□ 0.98
SNX6-205ENST00000555648 LRRC4BQ9NT99 713 aa21.17■□□□□ 0.98
SNX6-205ENST00000555648 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
SNX6-205ENST00000555648 SPG7Q9UQ90 795 aa21.16■□□□□ 0.98
SNX6-205ENST00000555648 TFCP2L1Q9NZI6 479 aa21.15■□□□□ 0.98
SNX6-205ENST00000555648 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
SNX6-205ENST00000555648 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.98
SNX6-205ENST00000555648 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
SNX6-205ENST00000555648 ZNF827Q17R98 1081 aa21.14■□□□□ 0.97
SNX6-205ENST00000555648 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.97
SNX6-205ENST00000555648 MORC1Q86VD1 984 aa21.13■□□□□ 0.97
SNX6-205ENST00000555648 EYA1Q99502 592 aa21.13■□□□□ 0.97
SNX6-205ENST00000555648 BTAF1O14981 1849 aa21.13■□□□□ 0.97
SNX6-205ENST00000555648 PTGER2P43116 358 aa21.12■□□□□ 0.97
SNX6-205ENST00000555648 KCNQ4P56696 695 aa21.12■□□□□ 0.97
SNX6-205ENST00000555648 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
SNX6-205ENST00000555648 NSD2O96028 1365 aa21.11■□□□□ 0.97
SNX6-205ENST00000555648 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
SNX6-205ENST00000555648 CYP27B1O15528 508 aa21.1■□□□□ 0.97
SNX6-205ENST00000555648 RGPD2P0DJD1 1756 aa21.1■□□□□ 0.97
SNX6-205ENST00000555648 EIF4A2Q14240 407 aaKnown RBP21.09■□□□□ 0.97
SNX6-205ENST00000555648 SLC16A10Q8TF71 515 aa21.09■□□□□ 0.97
SNX6-205ENST00000555648 CASZ1Q86V15 1759 aa21.08■□□□□ 0.97
SNX6-205ENST00000555648 MSH5O43196 834 aa21.08■□□□□ 0.97
SNX6-205ENST00000555648 POLD1P28340 1107 aa21.08■□□□□ 0.97
SNX6-205ENST00000555648 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
SNX6-205ENST00000555648 ARXQ96QS3 562 aa21.08■□□□□ 0.97
SNX6-205ENST00000555648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.08■□□□□ 0.977e-15■□□□□ 9.4
SNX6-205ENST00000555648 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
SNX6-205ENST00000555648 FHDC1Q9C0D6 1143 aaPredicted RBP21.06■□□□□ 0.96
SNX6-205ENST00000555648 DOT1LQ8TEK3 1739 aa21.06■□□□□ 0.96
SNX6-205ENST00000555648 PALLDQ8WX93 1383 aa21.05■□□□□ 0.96
SNX6-205ENST00000555648 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
SNX6-205ENST00000555648 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
SNX6-205ENST00000555648 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
SNX6-205ENST00000555648 SYT17Q9BSW7 474 aa21.04■□□□□ 0.96
SNX6-205ENST00000555648 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
SNX6-205ENST00000555648 YY1P25490 414 aa21.03■□□□□ 0.96
SNX6-205ENST00000555648 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
SNX6-205ENST00000555648 SGIP1Q9BQI5 828 aa21.03■□□□□ 0.96
SNX6-205ENST00000555648 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
SNX6-205ENST00000555648 SHANK3Q9BYB0 1731 aa21.02■□□□□ 0.96
SNX6-205ENST00000555648 PIGBQ92521 554 aa21.02■□□□□ 0.96
SNX6-205ENST00000555648 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.95
SNX6-205ENST00000555648 PHKG2P15735 406 aa21.01■□□□□ 0.95
SNX6-205ENST00000555648 PLEKHO1Q53GL0 409 aaPredicted RBP21.01■□□□□ 0.95
SNX6-205ENST00000555648 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
SNX6-205ENST00000555648 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
SNX6-205ENST00000555648 IGSF1Q8N6C5 1336 aa21■□□□□ 0.95
SNX6-205ENST00000555648 AK7Q96M32 723 aa20.99■□□□□ 0.95
SNX6-205ENST00000555648 ANKRD26Q9UPS8 1709 aa20.98■□□□□ 0.95
SNX6-205ENST00000555648 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
SNX6-205ENST00000555648 MAP2P11137 1827 aaKnown RBP20.98■□□□□ 0.95
SNX6-205ENST00000555648 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
SNX6-205ENST00000555648 COL23A1Q86Y22 540 aaPredicted RBP20.97■□□□□ 0.95
SNX6-205ENST00000555648 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
SNX6-205ENST00000555648 C1orf141Q5JVX7 400 aa20.96■□□□□ 0.95
SNX6-205ENST00000555648 ZNF530Q6P9A1 599 aaPredicted RBP20.96■□□□□ 0.95
SNX6-205ENST00000555648 LOC102724428A0A0B4J2F2 783 aa20.95■□□□□ 0.94
SNX6-205ENST00000555648 SIK1P57059 783 aa20.95■□□□□ 0.94
SNX6-205ENST00000555648 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
SNX6-205ENST00000555648 DCAF5Q96JK2 942 aa20.94■□□□□ 0.94
SNX6-205ENST00000555648 LY75O60449 1722 aa20.94■□□□□ 0.94
SNX6-205ENST00000555648 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
SNX6-205ENST00000555648 ERVV-2B6SEH9 535 aa20.93■□□□□ 0.94
SNX6-205ENST00000555648 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
SNX6-205ENST00000555648 ASAP1Q9ULH1 1129 aa20.93■□□□□ 0.94
SNX6-205ENST00000555648 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
SNX6-205ENST00000555648 PHF14O94880 888 aa20.92■□□□□ 0.94
SNX6-205ENST00000555648 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
SNX6-205ENST00000555648 CABP4P57796 275 aa20.92■□□□□ 0.94
SNX6-205ENST00000555648 GPR162Q16538 588 aa20.92■□□□□ 0.94
SNX6-205ENST00000555648 MSL1Q68DK7 614 aa20.92■□□□□ 0.94
SNX6-205ENST00000555648 MTHFSP49914 203 aa20.91■□□□□ 0.94
SNX6-205ENST00000555648 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
SNX6-205ENST00000555648 AEBP1Q8IUX7 1158 aa20.91■□□□□ 0.94
SNX6-205ENST00000555648 PELP1Q8IZL8 1130 aaKnown RBP20.91■□□□□ 0.94
SNX6-205ENST00000555648 IL13P35225 146 aa20.9■□□□□ 0.94
SNX6-205ENST00000555648 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
SNX6-205ENST00000555648 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
SNX6-205ENST00000555648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.88■□□□□ 0.93
SNX6-205ENST00000555648 GNPATO15228 680 aa20.87■□□□□ 0.93
SNX6-205ENST00000555648 PER1O15534 1290 aaPredicted RBP20.87■□□□□ 0.93
SNX6-205ENST00000555648 SSFA2P28290 1259 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms