RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 KIF20BQ96Q89 1820 aa18.68■□□□□ 0.58
TUBB3-208ENST00000555576 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
TUBB3-208ENST00000555576 PNPLA7Q6ZV29 1317 aa18.68■□□□□ 0.58
TUBB3-208ENST00000555576 USP47Q96K76 1375 aa18.68■□□□□ 0.58
TUBB3-208ENST00000555576 FYB1O15117 783 aa18.67■□□□□ 0.58
TUBB3-208ENST00000555576 ARXQ96QS3 562 aa18.67■□□□□ 0.58
TUBB3-208ENST00000555576 AMPHP49418 695 aa18.66■□□□□ 0.58
TUBB3-208ENST00000555576 RRS1Q15050 365 aaKnown RBP18.66■□□□□ 0.58
TUBB3-208ENST00000555576 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
TUBB3-208ENST00000555576 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
TUBB3-208ENST00000555576 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
TUBB3-208ENST00000555576 CHD4Q14839 1912 aa18.64■□□□□ 0.58
TUBB3-208ENST00000555576 KCNQ4P56696 695 aa18.64■□□□□ 0.57
TUBB3-208ENST00000555576 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
TUBB3-208ENST00000555576 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
TUBB3-208ENST00000555576 TMF1P82094 1093 aa18.63■□□□□ 0.57
TUBB3-208ENST00000555576 ZNF784Q8NCA9 323 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-208ENST00000555576 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
TUBB3-208ENST00000555576 SYTL4Q96C24 671 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-208ENST00000555576 INSRP06213 1382 aa18.62■□□□□ 0.57
TUBB3-208ENST00000555576 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
TUBB3-208ENST00000555576 TOGARAM1Q9Y4F4 1720 aa18.61■□□□□ 0.57
TUBB3-208ENST00000555576 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
TUBB3-208ENST00000555576 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
TUBB3-208ENST00000555576 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
TUBB3-208ENST00000555576 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
TUBB3-208ENST00000555576 NCAPD2Q15021 1401 aa18.6■□□□□ 0.57
TUBB3-208ENST00000555576 SMG6Q86US8 1419 aaKnown RBP18.6■□□□□ 0.57
TUBB3-208ENST00000555576 FLT4P35916 1363 aa18.6■□□□□ 0.57
TUBB3-208ENST00000555576 C5P01031 1676 aa18.6■□□□□ 0.57
TUBB3-208ENST00000555576 HSP90AB2PQ58FF8 381 aa18.59■□□□□ 0.57
TUBB3-208ENST00000555576 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
TUBB3-208ENST00000555576 TFCP2L1Q9NZI6 479 aa18.58■□□□□ 0.56
TUBB3-208ENST00000555576 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-208ENST00000555576 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
TUBB3-208ENST00000555576 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
TUBB3-208ENST00000555576 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
TUBB3-208ENST00000555576 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
TUBB3-208ENST00000555576 RAPGEF4Q8WZA2 1011 aa18.55■□□□□ 0.56
TUBB3-208ENST00000555576 ITGB4P16144 1822 aa18.55■□□□□ 0.56
TUBB3-208ENST00000555576 CYP27B1O15528 508 aa18.54■□□□□ 0.56
TUBB3-208ENST00000555576 POLD1P28340 1107 aa18.54■□□□□ 0.56
TUBB3-208ENST00000555576 CDCA8Q53HL2 280 aa18.54■□□□□ 0.56
TUBB3-208ENST00000555576 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
TUBB3-208ENST00000555576 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
TUBB3-208ENST00000555576 NLGN2Q8NFZ4 835 aa18.53■□□□□ 0.56
TUBB3-208ENST00000555576 EMILIN1Q9Y6C2 1016 aa18.53■□□□□ 0.56
TUBB3-208ENST00000555576 PALLDQ8WX93 1383 aa18.52■□□□□ 0.55
TUBB3-208ENST00000555576 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
TUBB3-208ENST00000555576 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-208ENST00000555576 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
TUBB3-208ENST00000555576 GPR162Q16538 588 aa18.49■□□□□ 0.55
TUBB3-208ENST00000555576 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
TUBB3-208ENST00000555576 KLHL34Q8N239 644 aa18.48■□□□□ 0.55
TUBB3-208ENST00000555576 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
TUBB3-208ENST00000555576 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
TUBB3-208ENST00000555576 AMIGO3Q86WK7 504 aa18.47■□□□□ 0.55
TUBB3-208ENST00000555576 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
TUBB3-208ENST00000555576 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
TUBB3-208ENST00000555576 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
TUBB3-208ENST00000555576 PIGBQ92521 554 aa18.45■□□□□ 0.54
TUBB3-208ENST00000555576 EYA1Q99502 592 aa18.44■□□□□ 0.54
TUBB3-208ENST00000555576 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
TUBB3-208ENST00000555576 CEP350Q5VT06 3117 aa18.44■□□□□ 0.54
TUBB3-208ENST00000555576 MSH5O43196 834 aa18.43■□□□□ 0.54
TUBB3-208ENST00000555576 C1QTNF8P60827 252 aa18.43■□□□□ 0.54
TUBB3-208ENST00000555576 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
TUBB3-208ENST00000555576 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
TUBB3-208ENST00000555576 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
TUBB3-208ENST00000555576 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-208ENST00000555576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
TUBB3-208ENST00000555576 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
TUBB3-208ENST00000555576 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-208ENST00000555576 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
TUBB3-208ENST00000555576 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
TUBB3-208ENST00000555576 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
TUBB3-208ENST00000555576 SMIM5Q71RC9 77 aa18.39■□□□□ 0.53
TUBB3-208ENST00000555576 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
TUBB3-208ENST00000555576 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
TUBB3-208ENST00000555576 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 PHKG2P15735 406 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 SIK1P57059 783 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
TUBB3-208ENST00000555576 AK7Q96M32 723 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 KDRP35968 1356 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
TUBB3-208ENST00000555576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
TUBB3-208ENST00000555576 GRIN3BO60391 1043 aa18.37■□□□□ 0.53
TUBB3-208ENST00000555576 ITPK1Q13572 414 aa18.37■□□□□ 0.53
TUBB3-208ENST00000555576 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
TUBB3-208ENST00000555576 ADCY9O60503 1353 aa18.36■□□□□ 0.53
TUBB3-208ENST00000555576 SSFA2P28290 1259 aa18.36■□□□□ 0.53
TUBB3-208ENST00000555576 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
TUBB3-208ENST00000555576 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
TUBB3-208ENST00000555576 PHF14O94880 888 aa18.35■□□□□ 0.53
TUBB3-208ENST00000555576 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
TUBB3-208ENST00000555576 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
TUBB3-208ENST00000555576 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-208ENST00000555576 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-208ENST00000555576 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms