RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
TDP1-212ENST00000555565 LY75O60449 1722 aa15.33■□□□□ 0.04
TDP1-212ENST00000555565 KAT6BQ8WYB5 2073 aa15.32■□□□□ 0.04
TDP1-212ENST00000555565 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
TDP1-212ENST00000555565 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
TDP1-212ENST00000555565 LTN1O94822 1766 aa15.31■□□□□ 0.04
TDP1-212ENST00000555565 IP6K1Q92551 441 aa15.31■□□□□ 0.04
TDP1-212ENST00000555565 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
TDP1-212ENST00000555565 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
TDP1-212ENST00000555565 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
TDP1-212ENST00000555565 CCNL1Q9UK58 526 aaPredicted RBP15.3■□□□□ 0.04
TDP1-212ENST00000555565 SLC12A5Q9H2X9 1139 aa15.28■□□□□ 0.04
TDP1-212ENST00000555565 KIF3CO14782 793 aa15.27■□□□□ 0.04
TDP1-212ENST00000555565 TMC1Q8TDI8 760 aa15.27■□□□□ 0.04
TDP1-212ENST00000555565 ZNF526Q8TF50 670 aaPredicted RBP15.27■□□□□ 0.04
TDP1-212ENST00000555565 DOT1LQ8TEK3 1739 aa15.26■□□□□ 0.03
TDP1-212ENST00000555565 MSH5O43196 834 aa15.26■□□□□ 0.03
TDP1-212ENST00000555565 AMIGO3Q86WK7 504 aa15.26■□□□□ 0.03
TDP1-212ENST00000555565 DNAJC5GQ8N7S2 189 aa15.26■□□□□ 0.03
TDP1-212ENST00000555565 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
TDP1-212ENST00000555565 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
TDP1-212ENST00000555565 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
TDP1-212ENST00000555565 TESK2Q96S53 571 aa15.26■□□□□ 0.03
TDP1-212ENST00000555565 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
TDP1-212ENST00000555565 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
TDP1-212ENST00000555565 MEGF6O75095 1541 aa15.24■□□□□ 0.03
TDP1-212ENST00000555565 FBLN1P23142 703 aa15.24■□□□□ 0.03
TDP1-212ENST00000555565 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
TDP1-212ENST00000555565 EDC4Q6P2E9 1401 aaKnown RBP15.24■□□□□ 0.03
TDP1-212ENST00000555565 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
TDP1-212ENST00000555565 USP47Q96K76 1375 aa15.23■□□□□ 0.03
TDP1-212ENST00000555565 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
TDP1-212ENST00000555565 HOXC9P31274 260 aa15.22■□□□□ 0.03
TDP1-212ENST00000555565 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
TDP1-212ENST00000555565 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
TDP1-212ENST00000555565 NBPF6Q5VWK0 638 aa15.2■□□□□ 0.02
TDP1-212ENST00000555565 SMIM5Q71RC9 77 aa15.2■□□□□ 0.02
TDP1-212ENST00000555565 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
TDP1-212ENST00000555565 NBPF4Q96M43 638 aa15.2■□□□□ 0.02
TDP1-212ENST00000555565 C5P01031 1676 aa15.19■□□□□ 0.02
TDP1-212ENST00000555565 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
TDP1-212ENST00000555565 WWC3Q9ULE0 1092 aa15.19■□□□□ 0.02
TDP1-212ENST00000555565 RGPD2P0DJD1 1756 aa15.19■□□□□ 0.02
TDP1-212ENST00000555565 APLP1P51693 650 aa15.18■□□□□ 0.02
TDP1-212ENST00000555565 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
TDP1-212ENST00000555565 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
TDP1-212ENST00000555565 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
TDP1-212ENST00000555565 TAF1LQ8IZX4 1826 aa15.16■□□□□ 0.02
TDP1-212ENST00000555565 TOMM70O94826 608 aa15.15■□□□□ 0.02
TDP1-212ENST00000555565 AMPHP49418 695 aa15.15■□□□□ 0.02
TDP1-212ENST00000555565 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
TDP1-212ENST00000555565 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
TDP1-212ENST00000555565 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
TDP1-212ENST00000555565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
TDP1-212ENST00000555565 MPRIPQ6WCQ1 1025 aa15.14■□□□□ 0.01
TDP1-212ENST00000555565 CYP27B1O15528 508 aa15.13■□□□□ 0.01
TDP1-212ENST00000555565 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
TDP1-212ENST00000555565 TMF1P82094 1093 aa15.13■□□□□ 0.01
TDP1-212ENST00000555565 COG3Q96JB2 828 aa15.13■□□□□ 0.01
TDP1-212ENST00000555565 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
TDP1-212ENST00000555565 COL13A1Q5TAT6 717 aaPredicted RBP15.12■□□□□ 0.01
TDP1-212ENST00000555565 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
TDP1-212ENST00000555565 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
TDP1-212ENST00000555565 PHF14O94880 888 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 PIGBQ92521 554 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 AK7Q96M32 723 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 PCGF6Q9BYE7 350 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
TDP1-212ENST00000555565 PCNTO95613 3336 aa15.1■□□□□ 0.01
TDP1-212ENST00000555565 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
TDP1-212ENST00000555565 SSFA2P28290 1259 aa15.1■□□□□ 0.01
TDP1-212ENST00000555565 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
TDP1-212ENST00000555565 NMRK2Q9NPI5 230 aa15.1■□□□□ 0.01
TDP1-212ENST00000555565 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
TDP1-212ENST00000555565 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
TDP1-212ENST00000555565 KIAA1551Q9HCM1 1747 aa15.09■□□□□ 0.01
TDP1-212ENST00000555565 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
TDP1-212ENST00000555565 MAP2P11137 1827 aaKnown RBP15.09■□□□□ 0.01
TDP1-212ENST00000555565 FYB1O15117 783 aa15.09■□□□□ 0.01
TDP1-212ENST00000555565 HSP90AB2PQ58FF8 381 aa15.09■□□□□ 0.01
TDP1-212ENST00000555565 JMYQ8N9B5 988 aa15.09■□□□□ 0.01
TDP1-212ENST00000555565 HTRA3P83110 453 aa15.08■□□□□ 0
TDP1-212ENST00000555565 ITPK1Q13572 414 aa15.08■□□□□ 0
TDP1-212ENST00000555565 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
TDP1-212ENST00000555565 GGNBP2Q9H3C7 697 aa15.08■□□□□ 0
TDP1-212ENST00000555565 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
TDP1-212ENST00000555565 SIK1P57059 783 aa15.07■□□□□ 0
TDP1-212ENST00000555565 CDCA8Q53HL2 280 aa15.07■□□□□ 0
TDP1-212ENST00000555565 KLRG1Q96E93 195 aa15.07■□□□□ 0
TDP1-212ENST00000555565 INSRP06213 1382 aa15.07■□□□□ 0
TDP1-212ENST00000555565 ITGB4P16144 1822 aa15.06■□□□□ 0
TDP1-212ENST00000555565 A0A0G2JLW4 131 aa15.06■□□□□ 0
TDP1-212ENST00000555565 MMP10P09238 476 aa15.06■□□□□ 0
TDP1-212ENST00000555565 TGFB2P61812 414 aa15.06■□□□□ 0
TDP1-212ENST00000555565 RBM46Q8TBY0 533 aaKnown RBP15.06■□□□□ 0
TDP1-212ENST00000555565 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
TDP1-212ENST00000555565 KIF13BQ9NQT8 1826 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms