RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 USP4Q13107 963 aa10.49□□□□□ -0.73
PAX3-210ENST00000555548 ERFEQ4G0M1 354 aa10.49□□□□□ -0.73
PAX3-210ENST00000555548 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
PAX3-210ENST00000555548 PTCD1O75127 700 aaKnown RBP10.48□□□□□ -0.73
PAX3-210ENST00000555548 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
PAX3-210ENST00000555548 ESPNB1AK53 854 aa10.47□□□□□ -0.73
PAX3-210ENST00000555548 RECKO95980 971 aa10.47□□□□□ -0.73
PAX3-210ENST00000555548 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
PAX3-210ENST00000555548 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
PAX3-210ENST00000555548 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
PAX3-210ENST00000555548 RGL4Q8IZJ4 473 aa10.47□□□□□ -0.73
PAX3-210ENST00000555548 COL26A1Q96A83 441 aa10.47□□□□□ -0.73
PAX3-210ENST00000555548 LGR5O75473 907 aa10.46□□□□□ -0.73
PAX3-210ENST00000555548 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
PAX3-210ENST00000555548 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.73
PAX3-210ENST00000555548 MKNK1Q9BUB5 465 aa10.46□□□□□ -0.73
PAX3-210ENST00000555548 BCL11AQ9H165 835 aa10.46□□□□□ -0.73
PAX3-210ENST00000555548 PCDHB11Q9Y5F2 797 aa10.46□□□□□ -0.73
PAX3-210ENST00000555548 ADH1BP00325 375 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 CAPN12Q6ZSI9 719 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 CCDC24Q8N4L8 307 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 TSEN2Q8NCE0 465 aaKnown RBP10.45□□□□□ -0.74
PAX3-210ENST00000555548 SLC10A4Q96EP9 437 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
PAX3-210ENST00000555548 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
PAX3-210ENST00000555548 ZC3H6P61129 1189 aaKnown RBP10.44□□□□□ -0.74
PAX3-210ENST00000555548 MTMR3Q13615 1198 aa10.44□□□□□ -0.74
PAX3-210ENST00000555548 NBPF20Q3BBV1 942 aa10.44□□□□□ -0.74
PAX3-210ENST00000555548 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
PAX3-210ENST00000555548 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
PAX3-210ENST00000555548 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
PAX3-210ENST00000555548 NPR3P17342 541 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 COPS2P61201 443 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 HELQQ8TDG4 1101 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 BAP1Q92560 729 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 WNT2BQ93097 391 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
PAX3-210ENST00000555548 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
PAX3-210ENST00000555548 AGERQ15109 404 aa10.42□□□□□ -0.74
PAX3-210ENST00000555548 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
PAX3-210ENST00000555548 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
PAX3-210ENST00000555548 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
PAX3-210ENST00000555548 ST18O60284 1047 aa10.41□□□□□ -0.74
PAX3-210ENST00000555548 HSP90B1P14625 803 aaKnown RBP10.41□□□□□ -0.74
PAX3-210ENST00000555548 IGFBP4P22692 258 aa10.41□□□□□ -0.74
PAX3-210ENST00000555548 ZNF511Q8NB15 262 aa10.41□□□□□ -0.74
PAX3-210ENST00000555548 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
PAX3-210ENST00000555548 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
PAX3-210ENST00000555548 CDV3Q9UKY7 258 aaKnown RBP10.41□□□□□ -0.74
PAX3-210ENST00000555548 TLL1O43897 1013 aa10.4□□□□□ -0.74
PAX3-210ENST00000555548 FAM13AO94988 1023 aa10.4□□□□□ -0.74
PAX3-210ENST00000555548 TRMT44Q8IYL2 757 aaKnown RBP10.4□□□□□ -0.74
PAX3-210ENST00000555548 RBCK1Q9BYM8 510 aa10.4□□□□□ -0.74
PAX3-210ENST00000555548 FOXO3O43524 673 aa10.39□□□□□ -0.75
PAX3-210ENST00000555548 ZPR1O75312 459 aa10.39□□□□□ -0.75
PAX3-210ENST00000555548 MYCP01106 439 aaPredicted RBP10.39□□□□□ -0.75
PAX3-210ENST00000555548 TSNAXIP1Q2TAA8 658 aa10.39□□□□□ -0.75
PAX3-210ENST00000555548 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
PAX3-210ENST00000555548 ZNF358Q9NW07 568 aa10.39□□□□□ -0.75
PAX3-210ENST00000555548 P4HBP07237 508 aaKnown RBP10.38□□□□□ -0.75
PAX3-210ENST00000555548 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
PAX3-210ENST00000555548 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
PAX3-210ENST00000555548 FAM177A1Q8N128 213 aaPredicted RBP10.38□□□□□ -0.75
PAX3-210ENST00000555548 NAA30Q147X3 362 aaPredicted RBP10.37□□□□□ -0.75
PAX3-210ENST00000555548 TMC7Q7Z402 723 aa10.37□□□□□ -0.75
PAX3-210ENST00000555548 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
PAX3-210ENST00000555548 BACH2Q9BYV9 841 aa10.36□□□□□ -0.75
PAX3-210ENST00000555548 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
PAX3-210ENST00000555548 POTEB3A0JP26 581 aa10.35□□□□□ -0.75
PAX3-210ENST00000555548 POTEBQ6S5H4 581 aa10.35□□□□□ -0.75
PAX3-210ENST00000555548 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
PAX3-210ENST00000555548 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
PAX3-210ENST00000555548 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
PAX3-210ENST00000555548 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
PAX3-210ENST00000555548 TREHO43280 583 aa10.34□□□□□ -0.75
PAX3-210ENST00000555548 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
PAX3-210ENST00000555548 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
PAX3-210ENST00000555548 NDUFB5O43674 189 aa10.33□□□□□ -0.76
PAX3-210ENST00000555548 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
PAX3-210ENST00000555548 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
PAX3-210ENST00000555548 WASLO00401 505 aaPredicted RBP10.32□□□□□ -0.76
PAX3-210ENST00000555548 MPSTP25325 297 aa10.32□□□□□ -0.76
PAX3-210ENST00000555548 ERCC5P28715 1186 aaPredicted RBP10.32□□□□□ -0.76
PAX3-210ENST00000555548 SCTRP47872 440 aa10.32□□□□□ -0.76
PAX3-210ENST00000555548 UBXN4Q92575 508 aa10.32□□□□□ -0.76
PAX3-210ENST00000555548 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
PAX3-210ENST00000555548 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 BACH1O14867 736 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 FGD1P98174 961 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 HDLBPQ00341 1268 aaKnown RBP10.31□□□□□ -0.76
PAX3-210ENST00000555548 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 MTRQ99707 1265 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
PAX3-210ENST00000555548 SCNN1DP51172 638 aa10.3□□□□□ -0.76
PAX3-210ENST00000555548 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
PAX3-210ENST00000555548 SH3BP2P78314 561 aa10.3□□□□□ -0.76
PAX3-210ENST00000555548 DSC3Q14574 896 aa10.3□□□□□ -0.76
PAX3-210ENST00000555548 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms