RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
NUMB-216ENST00000555394 IP6K1Q92551 441 aa18.35■□□□□ 0.53
NUMB-216ENST00000555394 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
NUMB-216ENST00000555394 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.53
NUMB-216ENST00000555394 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
NUMB-216ENST00000555394 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
NUMB-216ENST00000555394 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
NUMB-216ENST00000555394 ABCC4O15439 1325 aa18.33■□□□□ 0.52
NUMB-216ENST00000555394 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
NUMB-216ENST00000555394 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
NUMB-216ENST00000555394 GCP02774 474 aa18.32■□□□□ 0.52
NUMB-216ENST00000555394 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
NUMB-216ENST00000555394 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
NUMB-216ENST00000555394 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
NUMB-216ENST00000555394 HSPA2P54652 639 aa18.31■□□□□ 0.52
NUMB-216ENST00000555394 API5Q9BZZ5 524 aaKnown RBP18.31■□□□□ 0.52
NUMB-216ENST00000555394 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
NUMB-216ENST00000555394 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
NUMB-216ENST00000555394 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
NUMB-216ENST00000555394 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
NUMB-216ENST00000555394 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
NUMB-216ENST00000555394 NFAT5O94916 1531 aa18.3■□□□□ 0.52
NUMB-216ENST00000555394 SEC24BO95487 1268 aa18.29■□□□□ 0.52
NUMB-216ENST00000555394 LRRC59Q96AG4 307 aaKnown RBP18.29■□□□□ 0.52
NUMB-216ENST00000555394 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
NUMB-216ENST00000555394 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
NUMB-216ENST00000555394 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
NUMB-216ENST00000555394 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
NUMB-216ENST00000555394 HAP1P54257 671 aaPredicted RBP18.28■□□□□ 0.52
NUMB-216ENST00000555394 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
NUMB-216ENST00000555394 TMEM94Q12767 1356 aa18.27■□□□□ 0.52
NUMB-216ENST00000555394 MSH6P52701 1360 aa18.27■□□□□ 0.51
NUMB-216ENST00000555394 SIRT2Q8IXJ6 389 aa18.26■□□□□ 0.51
NUMB-216ENST00000555394 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
NUMB-216ENST00000555394 ATF3P18847 181 aa18.25■□□□□ 0.51
NUMB-216ENST00000555394 G2E3Q7L622 706 aa18.25■□□□□ 0.51
NUMB-216ENST00000555394 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
NUMB-216ENST00000555394 AXIN2Q9Y2T1 843 aa18.25■□□□□ 0.51
NUMB-216ENST00000555394 RGS12O14924 1447 aa18.24■□□□□ 0.51
NUMB-216ENST00000555394 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
NUMB-216ENST00000555394 LTN1O94822 1766 aa18.24■□□□□ 0.51
NUMB-216ENST00000555394 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
NUMB-216ENST00000555394 USP19O94966 1318 aa18.23■□□□□ 0.51
NUMB-216ENST00000555394 NUCB1Q02818 461 aa18.23■□□□□ 0.51
NUMB-216ENST00000555394 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
NUMB-216ENST00000555394 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
NUMB-216ENST00000555394 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
NUMB-216ENST00000555394 ZC3H6P61129 1189 aaKnown RBP18.22■□□□□ 0.51
NUMB-216ENST00000555394 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
NUMB-216ENST00000555394 SLC4A3P48751 1232 aa18.21■□□□□ 0.51
NUMB-216ENST00000555394 PTPRCP08575 1304 aa18.21■□□□□ 0.51
NUMB-216ENST00000555394 F6X3S4 739 aa18.2■□□□□ 0.5
NUMB-216ENST00000555394 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
NUMB-216ENST00000555394 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
NUMB-216ENST00000555394 MST1RQ04912 1400 aa18.2■□□□□ 0.5
NUMB-216ENST00000555394 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
NUMB-216ENST00000555394 SLIT3O75094 1523 aa18.19■□□□□ 0.5
NUMB-216ENST00000555394 SLC4A10Q6U841 1118 aa18.18■□□□□ 0.5
NUMB-216ENST00000555394 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
NUMB-216ENST00000555394 MEIS3Q99687 375 aa18.17■□□□□ 0.5
NUMB-216ENST00000555394 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
NUMB-216ENST00000555394 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
NUMB-216ENST00000555394 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
NUMB-216ENST00000555394 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
NUMB-216ENST00000555394 STRCP1A6NGW2 1772 aa18.16■□□□□ 0.5
NUMB-216ENST00000555394 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
NUMB-216ENST00000555394 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
NUMB-216ENST00000555394 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
NUMB-216ENST00000555394 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
NUMB-216ENST00000555394 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
NUMB-216ENST00000555394 NBR1Q14596 966 aa18.15■□□□□ 0.5
NUMB-216ENST00000555394 BABAM1Q9NWV8 329 aa18.15■□□□□ 0.5
NUMB-216ENST00000555394 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
NUMB-216ENST00000555394 KCNQ3O43525 872 aa18.15■□□□□ 0.5
NUMB-216ENST00000555394 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
NUMB-216ENST00000555394 FLIIQ13045 1269 aa18.14■□□□□ 0.49
NUMB-216ENST00000555394 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
NUMB-216ENST00000555394 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
NUMB-216ENST00000555394 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
NUMB-216ENST00000555394 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
NUMB-216ENST00000555394 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
NUMB-216ENST00000555394 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
NUMB-216ENST00000555394 BCL11AQ9H165 835 aa18.13■□□□□ 0.49
NUMB-216ENST00000555394 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 ERBB3P21860 1342 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
NUMB-216ENST00000555394 TEFQ10587 303 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 HDGFL1Q5TGJ6 251 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
NUMB-216ENST00000555394 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
NUMB-216ENST00000555394 DCCP43146 1447 aa18.11■□□□□ 0.49
NUMB-216ENST00000555394 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
NUMB-216ENST00000555394 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
NUMB-216ENST00000555394 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
NUMB-216ENST00000555394 NPHP3Q7Z494 1330 aa18.11■□□□□ 0.49
NUMB-216ENST00000555394 CCT4P50991 539 aaKnown RBP18.11■□□□□ 0.49
NUMB-216ENST00000555394 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
NUMB-216ENST00000555394 PXDNQ92626 1479 aa18.1■□□□□ 0.49
NUMB-216ENST00000555394 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms