RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 IL13P35225 146 aa27.64■■■□□ 2.01
FOXN3-209ENST00000555353 BCL9O00512 1426 aa27.63■■■□□ 2.01
FOXN3-209ENST00000555353 PARD3Q8TEW0 1356 aa27.62■■■□□ 2.01
FOXN3-209ENST00000555353 DIAPH1O60610 1272 aaKnown RBP27.62■■■□□ 2.01
FOXN3-209ENST00000555353 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
FOXN3-209ENST00000555353 SHANK3Q9BYB0 1731 aa27.62■■■□□ 2.01
FOXN3-209ENST00000555353 TNS1Q9HBL0 1735 aaKnown RBP27.62■■■□□ 2.01
FOXN3-209ENST00000555353 BAG6P46379 1132 aa27.6■■■□□ 2.01
FOXN3-209ENST00000555353 PKD1L3Q7Z443 1732 aa27.59■■■□□ 2.01
FOXN3-209ENST00000555353 PCDH11XQ9BZA7 1347 aa27.58■■■□□ 2.01
FOXN3-209ENST00000555353 PCDH11YQ9BZA8 1340 aa27.58■■■□□ 2.01
FOXN3-209ENST00000555353 RALBP1Q15311 655 aa27.57■■■□□ 2
FOXN3-209ENST00000555353 SULT6B1Q6IMI4 303 aa27.57■■■□□ 2
FOXN3-209ENST00000555353 DEFB132Q7Z7B7 95 aa27.57■■■□□ 2
FOXN3-209ENST00000555353 SPG7Q9UQ90 795 aa27.57■■■□□ 2
FOXN3-209ENST00000555353 COL3A1P02461 1466 aaPredicted RBP27.57■■■□□ 2
FOXN3-209ENST00000555353 APBA3O96018 575 aa27.56■■■□□ 2
FOXN3-209ENST00000555353 AEBP1Q8IUX7 1158 aa27.56■■■□□ 2
FOXN3-209ENST00000555353 BCL11BQ9C0K0 894 aaPredicted RBP27.55■■■□□ 2
FOXN3-209ENST00000555353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.55■■■□□ 22e-6■□□□□ 10.4
FOXN3-209ENST00000555353 PLEKHG2Q9H7P9 1386 aa27.54■■■□□ 2
FOXN3-209ENST00000555353 KDRP35968 1356 aa27.53■■■□□ 2
FOXN3-209ENST00000555353 ACSBG1Q96GR2 724 aa27.53■■■□□ 2
FOXN3-209ENST00000555353 NHSQ6T4R5 1651 aa27.53■■■□□ 2
FOXN3-209ENST00000555353 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
FOXN3-209ENST00000555353 ANP32CO43423 234 aa27.52■■■□□ 2
FOXN3-209ENST00000555353 EN1Q05925 392 aaPredicted RBP27.52■■■□□ 2
FOXN3-209ENST00000555353 HMOX1P09601 288 aa27.51■■□□□ 1.99
FOXN3-209ENST00000555353 DOT1LQ8TEK3 1739 aa27.5■■□□□ 1.99
FOXN3-209ENST00000555353 CYP27B1O15528 508 aa27.5■■□□□ 1.99
FOXN3-209ENST00000555353 PLEKHO1Q53GL0 409 aaPredicted RBP27.5■■□□□ 1.99
FOXN3-209ENST00000555353 NUDCQ9Y266 331 aa27.5■■□□□ 1.99
FOXN3-209ENST00000555353 KCNQ2O43526 872 aa27.49■■□□□ 1.99
FOXN3-209ENST00000555353 PTF1AQ7RTS3 328 aa27.49■■□□□ 1.99
FOXN3-209ENST00000555353 AMOTQ4VCS5 1084 aa27.48■■□□□ 1.99
FOXN3-209ENST00000555353 SYTL4Q96C24 671 aaPredicted RBP27.47■■□□□ 1.99
FOXN3-209ENST00000555353 IFNL2Q8IZJ0 200 aa27.46■■□□□ 1.99
FOXN3-209ENST00000555353 MYBBP1AQ9BQG0 1328 aaKnown RBP27.45■■□□□ 1.99
FOXN3-209ENST00000555353 BTAF1O14981 1849 aa27.45■■□□□ 1.98
FOXN3-209ENST00000555353 EZH2Q15910 746 aaKnown RBP27.44■■□□□ 1.98
FOXN3-209ENST00000555353 PHKG2P15735 406 aa27.43■■□□□ 1.98
FOXN3-209ENST00000555353 PRIM1P49642 420 aaKnown RBP27.43■■□□□ 1.98
FOXN3-209ENST00000555353 ZNF530Q6P9A1 599 aaPredicted RBP27.43■■□□□ 1.98
FOXN3-209ENST00000555353 CAMKK2Q96RR4 588 aa27.43■■□□□ 1.98
FOXN3-209ENST00000555353 PRKRIP1Q9H875 184 aaPredicted RBP27.43■■□□□ 1.98
FOXN3-209ENST00000555353 RGPD3A6NKT7 1758 aaPredicted RBP27.42■■□□□ 1.98
FOXN3-209ENST00000555353 RGPD4Q7Z3J3 1758 aa27.42■■□□□ 1.98
FOXN3-209ENST00000555353 PLSCR1O15162 318 aa27.42■■□□□ 1.98
FOXN3-209ENST00000555353 NKX1-1Q15270 411 aaPredicted RBP27.42■■□□□ 1.98
FOXN3-209ENST00000555353 U2AF1L5P0DN76 240 aaPredicted RBP27.41■■□□□ 1.98
FOXN3-209ENST00000555353 U2AF1Q01081 240 aaKnown RBP eCLIP27.41■■□□□ 1.982e-7■□□□□ 8.2
FOXN3-209ENST00000555353 C1orf141Q5JVX7 400 aa27.4■■□□□ 1.98
FOXN3-209ENST00000555353 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.97
FOXN3-209ENST00000555353 TOGARAM1Q9Y4F4 1720 aa27.39■■□□□ 1.97
FOXN3-209ENST00000555353 ITGB4P16144 1822 aa27.38■■□□□ 1.97
FOXN3-209ENST00000555353 RREB1Q92766 1687 aa27.37■■□□□ 1.97
FOXN3-209ENST00000555353 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
FOXN3-209ENST00000555353 MPRIPQ6WCQ1 1025 aa27.35■■□□□ 1.97
FOXN3-209ENST00000555353 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
FOXN3-209ENST00000555353 RSPH6AQ9H0K4 717 aa27.35■■□□□ 1.97
FOXN3-209ENST00000555353 FCHSD2O94868 740 aa27.34■■□□□ 1.97
FOXN3-209ENST00000555353 MTHFSDQ2M296 383 aaKnown RBP27.33■■□□□ 1.97
FOXN3-209ENST00000555353 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
FOXN3-209ENST00000555353 AKAP4Q5JQC9 854 aa27.32■■□□□ 1.96
FOXN3-209ENST00000555353 TXNRD1Q16881 649 aa27.31■■□□□ 1.96
FOXN3-209ENST00000555353 TMOD3Q9NYL9 352 aa27.31■■□□□ 1.96
FOXN3-209ENST00000555353 MIER1Q8N108 512 aa27.31■■□□□ 1.96
FOXN3-209ENST00000555353 GAS2L2Q8NHY3 880 aa27.3■■□□□ 1.96
FOXN3-209ENST00000555353 KDM6AO15550 1401 aaPredicted RBP27.29■■□□□ 1.96
FOXN3-209ENST00000555353 ERVV-2B6SEH9 535 aa27.29■■□□□ 1.96
FOXN3-209ENST00000555353 PROM2Q8N271 834 aa27.29■■□□□ 1.96
FOXN3-209ENST00000555353 SCN11AQ9UI33 1791 aa27.28■■□□□ 1.96
FOXN3-209ENST00000555353 PIGBQ92521 554 aa27.28■■□□□ 1.96
FOXN3-209ENST00000555353 VIRMAQ69YN4 1812 aaKnown RBP27.28■■□□□ 1.96
FOXN3-209ENST00000555353 NEFMP07197 916 aa27.27■■□□□ 1.96
FOXN3-209ENST00000555353 NBPF14Q5TI25 921 aa27.26■■□□□ 1.96
FOXN3-209ENST00000555353 PHACTR3Q96KR7 559 aa27.26■■□□□ 1.96
FOXN3-209ENST00000555353 LY75O60449 1722 aa27.26■■□□□ 1.95
FOXN3-209ENST00000555353 CABP4P57796 275 aa27.26■■□□□ 1.95
FOXN3-209ENST00000555353 PNNQ9H307 717 aaKnown RBP27.25■■□□□ 1.95
FOXN3-209ENST00000555353 SMARCC1Q92922 1105 aaPredicted RBP27.24■■□□□ 1.95
FOXN3-209ENST00000555353 SLC27A3Q5K4L6 730 aa27.23■■□□□ 1.95
FOXN3-209ENST00000555353 PALLDQ8WX93 1383 aa27.23■■□□□ 1.95
FOXN3-209ENST00000555353 MAP3K5Q99683 1374 aa27.23■■□□□ 1.95
FOXN3-209ENST00000555353 GNAT3A8MTJ3 354 aa27.22■■□□□ 1.95
FOXN3-209ENST00000555353 WDR43Q15061 677 aaKnown RBP eCLIP27.22■■□□□ 1.95
FOXN3-209ENST00000555353 RNMTO43148 476 aaKnown RBP27.21■■□□□ 1.95
FOXN3-209ENST00000555353 LGR6Q9HBX8 967 aa27.21■■□□□ 1.95
FOXN3-209ENST00000555353 CCER2I3L3R5 266 aa27.2■■□□□ 1.94
FOXN3-209ENST00000555353 R3HDM1Q15032 1099 aaKnown RBP27.2■■□□□ 1.94
FOXN3-209ENST00000555353 CCNL1Q9UK58 526 aaPredicted RBP27.2■■□□□ 1.94
FOXN3-209ENST00000555353 MAPK8IP3Q9UPT6 1336 aa27.19■■□□□ 1.94
FOXN3-209ENST00000555353 PSDA5PKW4 1024 aaPredicted RBP27.19■■□□□ 1.94
FOXN3-209ENST00000555353 NFATC2IPQ8NCF5 419 aa27.19■■□□□ 1.94
FOXN3-209ENST00000555353 LRRC4BQ9NT99 713 aa27.18■■□□□ 1.94
FOXN3-209ENST00000555353 ASAP1Q9ULH1 1129 aa27.18■■□□□ 1.94
FOXN3-209ENST00000555353 ADAMTS7Q9UKP4 1686 aa27.18■■□□□ 1.94
FOXN3-209ENST00000555353 PLEKHF1Q96S99 279 aa27.18■■□□□ 1.94
FOXN3-209ENST00000555353 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
FOXN3-209ENST00000555353 ATG3Q9NT62 314 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms