RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 MEGF6O75095 1541 aa17.73■□□□□ 0.43
PABPN1-205ENST00000555295 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
PABPN1-205ENST00000555295 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
PABPN1-205ENST00000555295 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
PABPN1-205ENST00000555295 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
PABPN1-205ENST00000555295 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
PABPN1-205ENST00000555295 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
PABPN1-205ENST00000555295 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
PABPN1-205ENST00000555295 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
PABPN1-205ENST00000555295 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
PABPN1-205ENST00000555295 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
PABPN1-205ENST00000555295 RGPD2P0DJD1 1756 aa17.71■□□□□ 0.43
PABPN1-205ENST00000555295 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
PABPN1-205ENST00000555295 HSPA5P11021 654 aaKnown RBP17.7■□□□□ 0.42
PABPN1-205ENST00000555295 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
PABPN1-205ENST00000555295 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
PABPN1-205ENST00000555295 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
PABPN1-205ENST00000555295 MTFR1LQ9H019 292 aa17.69■□□□□ 0.42
PABPN1-205ENST00000555295 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
PABPN1-205ENST00000555295 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
PABPN1-205ENST00000555295 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
PABPN1-205ENST00000555295 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
PABPN1-205ENST00000555295 SHANK3Q9BYB0 1731 aa17.66■□□□□ 0.42
PABPN1-205ENST00000555295 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
PABPN1-205ENST00000555295 NSD2O96028 1365 aa17.66■□□□□ 0.42
PABPN1-205ENST00000555295 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
PABPN1-205ENST00000555295 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
PABPN1-205ENST00000555295 LRRC4BQ9NT99 713 aa17.64■□□□□ 0.41
PABPN1-205ENST00000555295 TFCP2L1Q9NZI6 479 aa17.64■□□□□ 0.41
PABPN1-205ENST00000555295 CCNL1Q9UK58 526 aaPredicted RBP17.64■□□□□ 0.41
PABPN1-205ENST00000555295 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
PABPN1-205ENST00000555295 PANK3Q9H999 370 aa17.63■□□□□ 0.41
PABPN1-205ENST00000555295 ZNF827Q17R98 1081 aa17.62■□□□□ 0.41
PABPN1-205ENST00000555295 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
PABPN1-205ENST00000555295 POLKQ9UBT6 870 aa17.62■□□□□ 0.41
PABPN1-205ENST00000555295 PTGER2P43116 358 aa17.61■□□□□ 0.41
PABPN1-205ENST00000555295 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
PABPN1-205ENST00000555295 POLD1P28340 1107 aa17.6■□□□□ 0.41
PABPN1-205ENST00000555295 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
PABPN1-205ENST00000555295 NCAPD2Q15021 1401 aa17.6■□□□□ 0.41
PABPN1-205ENST00000555295 LY75O60449 1722 aa17.6■□□□□ 0.41
PABPN1-205ENST00000555295 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
PABPN1-205ENST00000555295 PKD1L3Q7Z443 1732 aa17.59■□□□□ 0.41
PABPN1-205ENST00000555295 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
PABPN1-205ENST00000555295 SMARCC1Q92922 1105 aaPredicted RBP17.59■□□□□ 0.41
PABPN1-205ENST00000555295 ARXQ96QS3 562 aa17.59■□□□□ 0.41
PABPN1-205ENST00000555295 EYA1Q99502 592 aa17.59■□□□□ 0.41
PABPN1-205ENST00000555295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.412e-30■■□□□ 13.7
PABPN1-205ENST00000555295 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
PABPN1-205ENST00000555295 CYP27B1O15528 508 aa17.58■□□□□ 0.4
PABPN1-205ENST00000555295 MORC1Q86VD1 984 aa17.58■□□□□ 0.4
PABPN1-205ENST00000555295 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.4
PABPN1-205ENST00000555295 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
PABPN1-205ENST00000555295 MSH5O43196 834 aa17.57■□□□□ 0.4
PABPN1-205ENST00000555295 KCNQ4P56696 695 aa17.57■□□□□ 0.4
PABPN1-205ENST00000555295 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
PABPN1-205ENST00000555295 PNPLA7Q6ZV29 1317 aa17.56■□□□□ 0.4
PABPN1-205ENST00000555295 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
PABPN1-205ENST00000555295 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
PABPN1-205ENST00000555295 YY1P25490 414 aa17.55■□□□□ 0.4
PABPN1-205ENST00000555295 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
PABPN1-205ENST00000555295 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
PABPN1-205ENST00000555295 FLAD1Q8NFF5 587 aa17.54■□□□□ 0.4
PABPN1-205ENST00000555295 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
PABPN1-205ENST00000555295 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
PABPN1-205ENST00000555295 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
PABPN1-205ENST00000555295 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
PABPN1-205ENST00000555295 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
PABPN1-205ENST00000555295 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
PABPN1-205ENST00000555295 AK7Q96M32 723 aa17.52■□□□□ 0.4
PABPN1-205ENST00000555295 C5P01031 1676 aa17.52■□□□□ 0.39
PABPN1-205ENST00000555295 PHKG2P15735 406 aa17.51■□□□□ 0.39
PABPN1-205ENST00000555295 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
PABPN1-205ENST00000555295 TOGARAM1Q9Y4F4 1720 aa17.51■□□□□ 0.39
PABPN1-205ENST00000555295 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
PABPN1-205ENST00000555295 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
PABPN1-205ENST00000555295 PIGBQ92521 554 aa17.5■□□□□ 0.39
PABPN1-205ENST00000555295 ITGB4P16144 1822 aa17.49■□□□□ 0.39
PABPN1-205ENST00000555295 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
PABPN1-205ENST00000555295 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
PABPN1-205ENST00000555295 SIK1P57059 783 aa17.47■□□□□ 0.39
PABPN1-205ENST00000555295 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
PABPN1-205ENST00000555295 COL23A1Q86Y22 540 aaPredicted RBP17.47■□□□□ 0.39
PABPN1-205ENST00000555295 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
PABPN1-205ENST00000555295 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
PABPN1-205ENST00000555295 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
PABPN1-205ENST00000555295 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
PABPN1-205ENST00000555295 GPR162Q16538 588 aa17.45■□□□□ 0.38
PABPN1-205ENST00000555295 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
PABPN1-205ENST00000555295 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
PABPN1-205ENST00000555295 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
PABPN1-205ENST00000555295 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
PABPN1-205ENST00000555295 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
PABPN1-205ENST00000555295 PHF14O94880 888 aa17.43■□□□□ 0.38
PABPN1-205ENST00000555295 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
PABPN1-205ENST00000555295 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
PABPN1-205ENST00000555295 SSFA2P28290 1259 aa17.42■□□□□ 0.38
PABPN1-205ENST00000555295 MTHFSP49914 203 aa17.42■□□□□ 0.38
PABPN1-205ENST00000555295 CABP4P57796 275 aa17.42■□□□□ 0.38
PABPN1-205ENST00000555295 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms