RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
PTPN21-207ENST00000555243 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
PTPN21-207ENST00000555243 INSRP06213 1382 aa18.78■□□□□ 0.6
PTPN21-207ENST00000555243 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
PTPN21-207ENST00000555243 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-207ENST00000555243 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
PTPN21-207ENST00000555243 BTAF1O14981 1849 aa18.76■□□□□ 0.59
PTPN21-207ENST00000555243 MEGF6O75095 1541 aa18.75■□□□□ 0.59
PTPN21-207ENST00000555243 CARD14Q9BXL6 1004 aa18.75■□□□□ 0.59
PTPN21-207ENST00000555243 YY1P25490 414 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 PTGER2P43116 358 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
PTPN21-207ENST00000555243 LRRC4BQ9NT99 713 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
PTPN21-207ENST00000555243 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
PTPN21-207ENST00000555243 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTPN21-207ENST00000555243 ZNF827Q17R98 1081 aa18.73■□□□□ 0.59
PTPN21-207ENST00000555243 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
PTPN21-207ENST00000555243 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
PTPN21-207ENST00000555243 EMILIN1Q9Y6C2 1016 aa18.72■□□□□ 0.59
PTPN21-207ENST00000555243 ARXQ96QS3 562 aa18.71■□□□□ 0.59
PTPN21-207ENST00000555243 CCNL1Q9UK58 526 aaPredicted RBP18.71■□□□□ 0.59
PTPN21-207ENST00000555243 POLD1P28340 1107 aa18.7■□□□□ 0.58
PTPN21-207ENST00000555243 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
PTPN21-207ENST00000555243 FHDC1Q9C0D6 1143 aaPredicted RBP18.7■□□□□ 0.58
PTPN21-207ENST00000555243 RGPD2P0DJD1 1756 aa18.69■□□□□ 0.58
PTPN21-207ENST00000555243 PAPPAQ13219 1627 aa18.68■□□□□ 0.58
PTPN21-207ENST00000555243 SYT17Q9BSW7 474 aa18.68■□□□□ 0.58
PTPN21-207ENST00000555243 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
PTPN21-207ENST00000555243 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
PTPN21-207ENST00000555243 MYOM1P52179 1685 aa18.67■□□□□ 0.58
PTPN21-207ENST00000555243 MSH5O43196 834 aa18.67■□□□□ 0.58
PTPN21-207ENST00000555243 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
PTPN21-207ENST00000555243 KCNQ4P56696 695 aa18.67■□□□□ 0.58
PTPN21-207ENST00000555243 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
PTPN21-207ENST00000555243 NSD2O96028 1365 aa18.67■□□□□ 0.58
PTPN21-207ENST00000555243 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
PTPN21-207ENST00000555243 TNNT2P45379 298 aaPredicted RBP18.65■□□□□ 0.58
PTPN21-207ENST00000555243 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
PTPN21-207ENST00000555243 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
PTPN21-207ENST00000555243 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
PTPN21-207ENST00000555243 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
PTPN21-207ENST00000555243 CYP27B1O15528 508 aa18.63■□□□□ 0.57
PTPN21-207ENST00000555243 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
PTPN21-207ENST00000555243 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
PTPN21-207ENST00000555243 EYA1Q99502 592 aa18.62■□□□□ 0.57
PTPN21-207ENST00000555243 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
PTPN21-207ENST00000555243 FLAD1Q8NFF5 587 aa18.61■□□□□ 0.57
PTPN21-207ENST00000555243 PANK3Q9H999 370 aa18.61■□□□□ 0.57
PTPN21-207ENST00000555243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.61■□□□□ 0.57
PTPN21-207ENST00000555243 UTRNP46939 3433 aa18.61■□□□□ 0.57
PTPN21-207ENST00000555243 MAP3K5Q99683 1374 aa18.6■□□□□ 0.57
PTPN21-207ENST00000555243 LY75O60449 1722 aa18.58■□□□□ 0.57
PTPN21-207ENST00000555243 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
PTPN21-207ENST00000555243 GPR162Q16538 588 aa18.58■□□□□ 0.56
PTPN21-207ENST00000555243 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
PTPN21-207ENST00000555243 IFNL2Q8IZJ0 200 aa18.58■□□□□ 0.56
PTPN21-207ENST00000555243 AK7Q96M32 723 aa18.58■□□□□ 0.56
PTPN21-207ENST00000555243 TMOD3Q9NYL9 352 aa18.58■□□□□ 0.56
PTPN21-207ENST00000555243 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
PTPN21-207ENST00000555243 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
PTPN21-207ENST00000555243 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
PTPN21-207ENST00000555243 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
PTPN21-207ENST00000555243 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
PTPN21-207ENST00000555243 COL23A1Q86Y22 540 aaPredicted RBP18.56■□□□□ 0.56
PTPN21-207ENST00000555243 PIGBQ92521 554 aa18.56■□□□□ 0.56
PTPN21-207ENST00000555243 MAP2P11137 1827 aaKnown RBP18.55■□□□□ 0.56
PTPN21-207ENST00000555243 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
PTPN21-207ENST00000555243 PHKG2P15735 406 aa18.54■□□□□ 0.56
PTPN21-207ENST00000555243 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
PTPN21-207ENST00000555243 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
PTPN21-207ENST00000555243 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
PTPN21-207ENST00000555243 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
PTPN21-207ENST00000555243 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
PTPN21-207ENST00000555243 LOC102724428A0A0B4J2F2 783 aa18.52■□□□□ 0.56
PTPN21-207ENST00000555243 SIK1P57059 783 aa18.52■□□□□ 0.56
PTPN21-207ENST00000555243 IGSF1Q8N6C5 1336 aa18.51■□□□□ 0.55
PTPN21-207ENST00000555243 PHF14O94880 888 aa18.5■□□□□ 0.55
PTPN21-207ENST00000555243 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
PTPN21-207ENST00000555243 C5P01031 1676 aa18.5■□□□□ 0.55
PTPN21-207ENST00000555243 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
PTPN21-207ENST00000555243 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
PTPN21-207ENST00000555243 DCAF5Q96JK2 942 aa18.49■□□□□ 0.55
PTPN21-207ENST00000555243 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
PTPN21-207ENST00000555243 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
PTPN21-207ENST00000555243 SSFA2P28290 1259 aa18.48■□□□□ 0.55
PTPN21-207ENST00000555243 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
PTPN21-207ENST00000555243 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
PTPN21-207ENST00000555243 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
PTPN21-207ENST00000555243 ITGB4P16144 1822 aa18.47■□□□□ 0.55
PTPN21-207ENST00000555243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
PTPN21-207ENST00000555243 ZNF784Q8NCA9 323 aaPredicted RBP18.47■□□□□ 0.55
PTPN21-207ENST00000555243 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
PTPN21-207ENST00000555243 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
PTPN21-207ENST00000555243 CABP4P57796 275 aa18.46■□□□□ 0.55
PTPN21-207ENST00000555243 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
PTPN21-207ENST00000555243 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
PTPN21-207ENST00000555243 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms