RNA–Protein interactions for RNA: ENST00000555193.1

TGFB3-203, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-203ENST00000555193 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
TGFB3-203ENST00000555193 CICQ96RK0 1608 aaPredicted RBP21.25■□□□□ 0.99
TGFB3-203ENST00000555193 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
TGFB3-203ENST00000555193 ERBB3P21860 1342 aa21.23■□□□□ 0.99
TGFB3-203ENST00000555193 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
TGFB3-203ENST00000555193 USP54Q70EL1 1684 aa21.21■□□□□ 0.99
TGFB3-203ENST00000555193 NSD2O96028 1365 aa21.21■□□□□ 0.99
TGFB3-203ENST00000555193 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
TGFB3-203ENST00000555193 RBM46Q8TBY0 533 aaKnown RBP21.19■□□□□ 0.98
TGFB3-203ENST00000555193 TTC21BQ7Z4L5 1316 aa21.19■□□□□ 0.98
TGFB3-203ENST00000555193 ANKRD36BQ8N2N9 1353 aa21.18■□□□□ 0.98
TGFB3-203ENST00000555193 N4BP2Q86UW6 1770 aaPredicted RBP21.16■□□□□ 0.98
TGFB3-203ENST00000555193 KIAA1210Q9ULL0 1709 aa21.16■□□□□ 0.98
TGFB3-203ENST00000555193 C16orf71Q8IYS4 520 aaPredicted RBP21.16■□□□□ 0.98
TGFB3-203ENST00000555193 HSPA1AP0DMV8 641 aaKnown RBP21.15■□□□□ 0.98
TGFB3-203ENST00000555193 HSPA1BP0DMV9 641 aaKnown RBP21.15■□□□□ 0.98
TGFB3-203ENST00000555193 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
TGFB3-203ENST00000555193 TOGARAM1Q9Y4F4 1720 aa21.15■□□□□ 0.98
TGFB3-203ENST00000555193 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.97
TGFB3-203ENST00000555193 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
TGFB3-203ENST00000555193 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
TGFB3-203ENST00000555193 UBR3Q6ZT12 1888 aa21.11■□□□□ 0.97
TGFB3-203ENST00000555193 USP47Q96K76 1375 aa21.11■□□□□ 0.97
TGFB3-203ENST00000555193 FSTL1Q12841 308 aa21.11■□□□□ 0.97
TGFB3-203ENST00000555193 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
TGFB3-203ENST00000555193 PKD1L3Q7Z443 1732 aa21.11■□□□□ 0.97
TGFB3-203ENST00000555193 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
TGFB3-203ENST00000555193 SMIM5Q71RC9 77 aa21.1■□□□□ 0.97
TGFB3-203ENST00000555193 C4BP0C0L5 1744 aa21.09■□□□□ 0.97
TGFB3-203ENST00000555193 AMIGO3Q86WK7 504 aa21.09■□□□□ 0.97
TGFB3-203ENST00000555193 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
TGFB3-203ENST00000555193 FLAD1Q8NFF5 587 aa21.08■□□□□ 0.97
TGFB3-203ENST00000555193 FAM208AQ9UK61 1670 aaKnown RBP21.08■□□□□ 0.96
TGFB3-203ENST00000555193 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 KIF13BQ9NQT8 1826 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 PHF14O94880 888 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 ARHGAP27Q6ZUM4 889 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 KCPQ6ZWJ8 1503 aa21.07■□□□□ 0.96
TGFB3-203ENST00000555193 PXDNLA1KZ92 1463 aa21.06■□□□□ 0.96
TGFB3-203ENST00000555193 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
TGFB3-203ENST00000555193 TNRC6CQ9HCJ0 1690 aaKnown RBP21.05■□□□□ 0.96
TGFB3-203ENST00000555193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
TGFB3-203ENST00000555193 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
TGFB3-203ENST00000555193 KTN1Q86UP2 1357 aaKnown RBP21.04■□□□□ 0.96
TGFB3-203ENST00000555193 BRCA1P38398 1863 aaKnown RBP21.03■□□□□ 0.96
TGFB3-203ENST00000555193 AK7Q96M32 723 aa21.02■□□□□ 0.96
TGFB3-203ENST00000555193 C9orf131Q5VYM1 1079 aa21.01■□□□□ 0.95
TGFB3-203ENST00000555193 RRAGCQ9HB90 399 aa21.01■□□□□ 0.95
TGFB3-203ENST00000555193 PCDH10Q9P2E7 1040 aa21.01■□□□□ 0.95
TGFB3-203ENST00000555193 A0A0G2JLW4 131 aa21■□□□□ 0.95
TGFB3-203ENST00000555193 NME9Q86XW9 330 aa21■□□□□ 0.95
TGFB3-203ENST00000555193 EVC2Q86UK5 1308 aa21■□□□□ 0.95
TGFB3-203ENST00000555193 ARFGEF1Q9Y6D6 1849 aa20.99■□□□□ 0.95
TGFB3-203ENST00000555193 MEGF6O75095 1541 aa20.99■□□□□ 0.95
TGFB3-203ENST00000555193 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
TGFB3-203ENST00000555193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.99■□□□□ 0.95
TGFB3-203ENST00000555193 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
TGFB3-203ENST00000555193 PLEKHG2Q9H7P9 1386 aa20.98■□□□□ 0.95
TGFB3-203ENST00000555193 SMC1BQ8NDV3 1235 aa20.98■□□□□ 0.95
TGFB3-203ENST00000555193 KDM2BQ8NHM5 1336 aa20.98■□□□□ 0.95
TGFB3-203ENST00000555193 USP31Q70CQ4 1352 aa20.97■□□□□ 0.95
TGFB3-203ENST00000555193 ITGB4P16144 1822 aa20.97■□□□□ 0.95
TGFB3-203ENST00000555193 SBF1O95248 1867 aa20.96■□□□□ 0.95
TGFB3-203ENST00000555193 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.95
TGFB3-203ENST00000555193 FCHSD2O94868 740 aa20.95■□□□□ 0.94
TGFB3-203ENST00000555193 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
TGFB3-203ENST00000555193 MMP10P09238 476 aa20.94■□□□□ 0.94
TGFB3-203ENST00000555193 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
TGFB3-203ENST00000555193 DPEP1P16444 411 aa20.92■□□□□ 0.94
TGFB3-203ENST00000555193 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
TGFB3-203ENST00000555193 RNF181Q9P0P0 153 aa20.92■□□□□ 0.94
TGFB3-203ENST00000555193 NSD3Q9BZ95 1437 aa20.92■□□□□ 0.94
TGFB3-203ENST00000555193 TGFB2P61812 414 aa20.91■□□□□ 0.94
TGFB3-203ENST00000555193 IP6K1Q92551 441 aa20.91■□□□□ 0.94
TGFB3-203ENST00000555193 SSFA2P28290 1259 aa20.9■□□□□ 0.94
TGFB3-203ENST00000555193 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
TGFB3-203ENST00000555193 SBNO2Q9Y2G9 1366 aa20.88■□□□□ 0.93
TGFB3-203ENST00000555193 HMGB2P26583 209 aaKnown RBP20.88■□□□□ 0.93
TGFB3-203ENST00000555193 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
TGFB3-203ENST00000555193 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
TGFB3-203ENST00000555193 GNPATO15228 680 aa20.86■□□□□ 0.93
TGFB3-203ENST00000555193 FOXN1O15353 648 aa20.86■□□□□ 0.93
TGFB3-203ENST00000555193 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
TGFB3-203ENST00000555193 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
TGFB3-203ENST00000555193 MKRN1Q9UHC7 482 aaKnown RBP20.84■□□□□ 0.93
TGFB3-203ENST00000555193 KCNA3P22001 575 aa20.82■□□□□ 0.92
TGFB3-203ENST00000555193 SMARCC1Q92922 1105 aaPredicted RBP20.82■□□□□ 0.92
TGFB3-203ENST00000555193 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
TGFB3-203ENST00000555193 HOXC9P31274 260 aa20.81■□□□□ 0.92
TGFB3-203ENST00000555193 FBLN1P23142 703 aa20.8■□□□□ 0.92
TGFB3-203ENST00000555193 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
TGFB3-203ENST00000555193 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
TGFB3-203ENST00000555193 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
TGFB3-203ENST00000555193 NBPF6Q5VWK0 638 aa20.79■□□□□ 0.92
TGFB3-203ENST00000555193 DCAF5Q96JK2 942 aa20.79■□□□□ 0.92
TGFB3-203ENST00000555193 NBPF4Q96M43 638 aa20.79■□□□□ 0.92
TGFB3-203ENST00000555193 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
TGFB3-203ENST00000555193 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
TGFB3-203ENST00000555193 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms