RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 CHD4Q14839 1912 aa13.63□□□□□ -0.23
HNRNPC-216ENST00000555137 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-216ENST00000555137 COG3Q96JB2 828 aa13.63□□□□□ -0.23
HNRNPC-216ENST00000555137 ANKRD36BQ8N2N9 1353 aa13.62□□□□□ -0.23
HNRNPC-216ENST00000555137 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
HNRNPC-216ENST00000555137 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-216ENST00000555137 AMPHP49418 695 aa13.6□□□□□ -0.23
HNRNPC-216ENST00000555137 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-216ENST00000555137 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
HNRNPC-216ENST00000555137 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
HNRNPC-216ENST00000555137 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
HNRNPC-216ENST00000555137 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
HNRNPC-216ENST00000555137 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-216ENST00000555137 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
HNRNPC-216ENST00000555137 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
HNRNPC-216ENST00000555137 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
HNRNPC-216ENST00000555137 FYB1O15117 783 aa13.58□□□□□ -0.24
HNRNPC-216ENST00000555137 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
HNRNPC-216ENST00000555137 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
HNRNPC-216ENST00000555137 GPR162Q16538 588 aa13.56□□□□□ -0.24
HNRNPC-216ENST00000555137 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-216ENST00000555137 USP47Q96K76 1375 aa13.56□□□□□ -0.24
HNRNPC-216ENST00000555137 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
HNRNPC-216ENST00000555137 POLD1P28340 1107 aa13.55□□□□□ -0.24
HNRNPC-216ENST00000555137 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
HNRNPC-216ENST00000555137 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
HNRNPC-216ENST00000555137 C5P01031 1676 aa13.54□□□□□ -0.24
HNRNPC-216ENST00000555137 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-216ENST00000555137 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 INSRP06213 1382 aa13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
HNRNPC-216ENST00000555137 CEP350Q5VT06 3117 aa13.52□□□□□ -0.24
HNRNPC-216ENST00000555137 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
HNRNPC-216ENST00000555137 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
HNRNPC-216ENST00000555137 TMF1P82094 1093 aa13.52□□□□□ -0.25
HNRNPC-216ENST00000555137 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
HNRNPC-216ENST00000555137 FLT4P35916 1363 aa13.52□□□□□ -0.25
HNRNPC-216ENST00000555137 PKD1L3Q7Z443 1732 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 CYP27B1O15528 508 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 MSH5O43196 834 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
HNRNPC-216ENST00000555137 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 ITGB4P16144 1822 aa13.5□□□□□ -0.25
HNRNPC-216ENST00000555137 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
HNRNPC-216ENST00000555137 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
HNRNPC-216ENST00000555137 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-216ENST00000555137 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
HNRNPC-216ENST00000555137 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
HNRNPC-216ENST00000555137 KIF24Q5T7B8 1368 aa13.48□□□□□ -0.25
HNRNPC-216ENST00000555137 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
HNRNPC-216ENST00000555137 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
HNRNPC-216ENST00000555137 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
HNRNPC-216ENST00000555137 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-216ENST00000555137 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-216ENST00000555137 PIGBQ92521 554 aa13.45□□□□□ -0.26
HNRNPC-216ENST00000555137 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 PHF14O94880 888 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
HNRNPC-216ENST00000555137 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 AK7Q96M32 723 aa13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 EYA1Q99502 592 aa13.42□□□□□ -0.26
HNRNPC-216ENST00000555137 ITPK1Q13572 414 aa13.41□□□□□ -0.26
HNRNPC-216ENST00000555137 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
HNRNPC-216ENST00000555137 WWC3Q9ULE0 1092 aa13.41□□□□□ -0.26
HNRNPC-216ENST00000555137 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
HNRNPC-216ENST00000555137 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
HNRNPC-216ENST00000555137 SIK1P57059 783 aa13.4□□□□□ -0.26
HNRNPC-216ENST00000555137 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
HNRNPC-216ENST00000555137 ADCY9O60503 1353 aa13.4□□□□□ -0.26
HNRNPC-216ENST00000555137 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
HNRNPC-216ENST00000555137 PHKG2P15735 406 aa13.38□□□□□ -0.27
HNRNPC-216ENST00000555137 SSFA2P28290 1259 aa13.38□□□□□ -0.27
HNRNPC-216ENST00000555137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.272e-20■□□□□ 8.3
HNRNPC-216ENST00000555137 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
HNRNPC-216ENST00000555137 KDRP35968 1356 aa13.37□□□□□ -0.27
HNRNPC-216ENST00000555137 GNPATO15228 680 aa13.37□□□□□ -0.27
HNRNPC-216ENST00000555137 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-216ENST00000555137 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
HNRNPC-216ENST00000555137 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
HNRNPC-216ENST00000555137 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-216ENST00000555137 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
HNRNPC-216ENST00000555137 IFNL2Q8IZJ0 200 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms